RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 TRBV6-6A0A0A6YYG2 114 aa17.06■□□□□ 0.32
RIPPLY3-201ENST00000329553 KNG1P01042 644 aa17.06■□□□□ 0.32
RIPPLY3-201ENST00000329553 IFNA2P01563 188 aa17.06■□□□□ 0.32
RIPPLY3-201ENST00000329553 RCC1P18754 421 aaPredicted RBP17.06■□□□□ 0.32
RIPPLY3-201ENST00000329553 ASCL1P50553 236 aa17.06■□□□□ 0.32
RIPPLY3-201ENST00000329553 C10orf91Q5T1B1 145 aa17.06■□□□□ 0.32
RIPPLY3-201ENST00000329553 FIP1L1Q6UN15 594 aaKnown RBP17.06■□□□□ 0.32
RIPPLY3-201ENST00000329553 PLPPR1Q8TBJ4 325 aa17.06■□□□□ 0.32
RIPPLY3-201ENST00000329553 TRDCB7Z8K6 153 aa17.06■□□□□ 0.32
RIPPLY3-201ENST00000329553 HOXB5P09067 269 aa17.06■□□□□ 0.32
RIPPLY3-201ENST00000329553 FXYD4P59646 89 aa17.06■□□□□ 0.32
RIPPLY3-201ENST00000329553 MST1LQ2TV78 715 aa17.06■□□□□ 0.32
RIPPLY3-201ENST00000329553 ZNF880Q6PDB4 577 aa17.06■□□□□ 0.32
RIPPLY3-201ENST00000329553 PCSK4Q6UW60 755 aa17.06■□□□□ 0.32
RIPPLY3-201ENST00000329553 LRRC29Q8WV35 223 aa17.06■□□□□ 0.32
RIPPLY3-201ENST00000329553 TOMM40LQ969M1 308 aa17.06■□□□□ 0.32
RIPPLY3-201ENST00000329553 MEGF10Q96KG7 1140 aa17.06■□□□□ 0.32
RIPPLY3-201ENST00000329553 MMP26Q9NRE1 261 aa17.06■□□□□ 0.32
RIPPLY3-201ENST00000329553 GLP1RP43220 463 aa17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 AKR1C2P52895 323 aa17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 AKR1C1Q04828 323 aa17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 HERPUD1Q15011 391 aa17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 SVBPQ8N300 66 aa17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 OR5T2Q8NGG2 359 aa17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 OR4A4PQ8NGN8 299 aa17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 FAM122AQ96E09 287 aa17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 TSNAXQ99598 290 aaKnown RBP17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 TREM2Q9NZC2 230 aa17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 KIR2DS1A0A191URI9 304 aa17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 FAM90A27PA6NNH2 459 aa17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 PSPNO60542 156 aa17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 TFF1P04155 84 aa17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 CTSDP07339 412 aaPredicted RBP17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 LMO1P25800 156 aa17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 CHRNB4P30926 498 aa17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 KIR2DS4P43632 304 aa17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 ADORA2A-AS1P86434 159 aa17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 KIR2DS1Q14954 304 aa17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 SHEQ5VZ18 495 aa17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 PUSL1Q8N0Z8 303 aaKnown RBP17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 GSKIPQ9P0R6 139 aa17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 LPAR3Q9UBY5 353 aa17.05■□□□□ 0.32
RIPPLY3-201ENST00000329553 COL6A6A6NMZ7 2263 aa17.04■□□□□ 0.32
RIPPLY3-201ENST00000329553 NBEAQ8NFP9 2946 aa17.04■□□□□ 0.32
RIPPLY3-201ENST00000329553 IGKV1-6A0A0C4DH72 117 aa17.04■□□□□ 0.32
RIPPLY3-201ENST00000329553 GPR31O00270 319 aa17.04■□□□□ 0.32
RIPPLY3-201ENST00000329553 ZNF728P0DKX0 622 aa17.04■□□□□ 0.32
RIPPLY3-201ENST00000329553 AADACP22760 399 aa17.04■□□□□ 0.32
RIPPLY3-201ENST00000329553 MDH2P40926 338 aaKnown RBP17.04■□□□□ 0.32
RIPPLY3-201ENST00000329553 SRSF3P84103 164 aaKnown RBP17.04■□□□□ 0.32
RIPPLY3-201ENST00000329553 IL34Q6ZMJ4 242 aa17.04■□□□□ 0.32
RIPPLY3-201ENST00000329553 ZNF497Q6ZNH5 498 aa17.04■□□□□ 0.32
RIPPLY3-201ENST00000329553 FAM219AQ8IW50 185 aa17.04■□□□□ 0.32
RIPPLY3-201ENST00000329553 ITLN1Q8WWA0 313 aa17.04■□□□□ 0.32
RIPPLY3-201ENST00000329553 MOB3AQ96BX8 217 aa17.04■□□□□ 0.32
RIPPLY3-201ENST00000329553 TRAV39A0A0B4J263 110 aa17.04■□□□□ 0.32
RIPPLY3-201ENST00000329553 TAAR5O14804 337 aa17.04■□□□□ 0.32
RIPPLY3-201ENST00000329553 TSPAN9O75954 239 aa17.04■□□□□ 0.32
RIPPLY3-201ENST00000329553 EGR1P18146 543 aa17.04■□□□□ 0.32
RIPPLY3-201ENST00000329553 MOGAT3Q86VF5 341 aa17.04■□□□□ 0.32
RIPPLY3-201ENST00000329553 CARHSP1Q9Y2V2 147 aaKnown RBP17.04■□□□□ 0.32
RIPPLY3-201ENST00000329553 NBASA2RRP1 2371 aa17.03■□□□□ 0.32
RIPPLY3-201ENST00000329553 NKX2-6A6NCS4 301 aa17.03■□□□□ 0.32
RIPPLY3-201ENST00000329553 H2AFB1P0C5Y9 115 aa17.03■□□□□ 0.32
RIPPLY3-201ENST00000329553 HKR1P10072 659 aa17.03■□□□□ 0.32
RIPPLY3-201ENST00000329553 S100A10P60903 97 aa17.03■□□□□ 0.32
RIPPLY3-201ENST00000329553 ADIPOQQ15848 244 aa17.03■□□□□ 0.32
RIPPLY3-201ENST00000329553 GUCA2BQ16661 112 aa17.03■□□□□ 0.32
RIPPLY3-201ENST00000329553 ADAM5Q6NVV9 412 aa17.03■□□□□ 0.32
RIPPLY3-201ENST00000329553 GAPTQ8N292 157 aa17.03■□□□□ 0.32
RIPPLY3-201ENST00000329553 SAT2Q96F10 170 aaPredicted RBP17.03■□□□□ 0.32
RIPPLY3-201ENST00000329553 SMIM8Q96KF7 97 aa17.03■□□□□ 0.32
RIPPLY3-201ENST00000329553 CNTNAP3BQ96NU0 1288 aa17.03■□□□□ 0.32
RIPPLY3-201ENST00000329553 CNTNAP3Q9BZ76 1288 aa17.03■□□□□ 0.32
RIPPLY3-201ENST00000329553 TPRP12270 2363 aaKnown RBP17.03■□□□□ 0.32
RIPPLY3-201ENST00000329553 RELNP78509 3460 aa17.03■□□□□ 0.32
RIPPLY3-201ENST00000329553 TMEM8BA6NDV4 472 aa17.02■□□□□ 0.32
RIPPLY3-201ENST00000329553 CRYM-AS1A6NIL9 109 aa17.02■□□□□ 0.32
RIPPLY3-201ENST00000329553 ZNF705EA8MWA4 302 aaPredicted RBP17.02■□□□□ 0.32
RIPPLY3-201ENST00000329553 PPYP01298 95 aa17.02■□□□□ 0.32
RIPPLY3-201ENST00000329553 IGHV1-46P01743 117 aa17.02■□□□□ 0.32
RIPPLY3-201ENST00000329553 CFHR2P36980 270 aa17.02■□□□□ 0.32
RIPPLY3-201ENST00000329553 CDSNQ15517 529 aa17.02■□□□□ 0.32
RIPPLY3-201ENST00000329553 SMIM21Q3B7S5 101 aa17.02■□□□□ 0.32
RIPPLY3-201ENST00000329553 FBXL19-AS1Q494R0 122 aa17.02■□□□□ 0.32
RIPPLY3-201ENST00000329553 SGPP2Q8IWX5 399 aa17.02■□□□□ 0.32
RIPPLY3-201ENST00000329553 OR10Z1Q8NGY1 313 aa17.02■□□□□ 0.32
RIPPLY3-201ENST00000329553 NGBQ9NPG2 151 aa17.02■□□□□ 0.32
RIPPLY3-201ENST00000329553 SRRM5B3KS81 715 aa17.02■□□□□ 0.32
RIPPLY3-201ENST00000329553 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.02■□□□□ 0.32
RIPPLY3-201ENST00000329553 TK1P04183 234 aa17.02■□□□□ 0.32
RIPPLY3-201ENST00000329553 OR4A8P0C604 315 aa17.02■□□□□ 0.32
RIPPLY3-201ENST00000329553 EIF5AP63241 154 aaKnown RBP17.02■□□□□ 0.32
RIPPLY3-201ENST00000329553 PJVKQ0ZLH3 352 aa17.02■□□□□ 0.32
RIPPLY3-201ENST00000329553 IAH1Q2TAA2 248 aaPredicted RBP17.02■□□□□ 0.32
RIPPLY3-201ENST00000329553 LDLRAD3Q86YD5 345 aa17.02■□□□□ 0.32
RIPPLY3-201ENST00000329553 GCSAMQ8N6F7 178 aa17.02■□□□□ 0.32
RIPPLY3-201ENST00000329553 PRR7Q8TB68 274 aa17.02■□□□□ 0.32
RIPPLY3-201ENST00000329553 OR2S2Q9NQN1 319 aa17.02■□□□□ 0.32
RIPPLY3-201ENST00000329553 METRNQ9UJH8 293 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms