RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Mesp2O08574 370 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Cd79aP11911 220 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Pip5k1aP70182 546 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Htr2bQ02152 479 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Scand1Q2M4I6 142 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Slc22a14Q497L9 629 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Klhdc2Q4G5Y1 406 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Rgp1Q8BHT7 391 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Slc16a13Q8CE94 428 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Seh1lQ8R2U0 360 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Acaa1bQ8VCH0 424 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Acaa1aQ921H8 424 aaKnown RBP13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Vmn1r167G3UW71 315 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Fut1O09160 376 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 P18524 117 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 B230104I21RikQ3USW4 141 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr99Q8VFE4 305 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr803Q8VFI3 308 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Bcdin3dQ91YP1 285 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Slc29a3Q99P65 475 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Cby1Q9D1C2 127 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 PipoxQ9D826 390 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Iqcf5Q9DAL7 148 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Arl3Q9WUL7 182 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Mrgpra9A0A140T8U8 332 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 2010106E10RikA2ANY3 279 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr1097A2AVA9 315 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Ccr2P51683 373 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Gabra1P62812 455 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Npas1P97459 594 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 PilrbQ2YFS2 224 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 LipnQ3U4B4 400 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Lefty1Q64280 368 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Asphd2Q80VP9 343 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 MetrnlQ8VE43 311 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr979Q8VH10 311 aa13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Ldb3Q9JKS4 723 aaKnown RBP13.83□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Vmn1r80L7N1Z3 308 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Wnt1P04426 370 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Lyz2P08905 148 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 CtdsplP58465 276 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Dok1P97465 482 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 XylbQ3TNA1 551 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Tob1Q61471 362 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 ErasQ7TN89 227 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr1386Q7TQT0 309 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr736Q8VFT6 312 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Hcfc1r1Q9CYQ5 120 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Aurkaip1Q9DCJ7 200 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Chst4Q9R1I1 388 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr39E9PVX1 319 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Pax2P32114 414 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 S100a3P62818 101 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 MpgQ04841 333 aaKnown RBP13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Zic2Q62520 530 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Ovch2Q7M761 609 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Nxph3Q91VX5 252 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Tmem51Q99LG1 249 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Ethe1Q9DCM0 254 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Fbxo27Q6DIA9 280 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Q80W69 301 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 LgalslQ8VED9 172 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 DohhQ99LN9 302 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Mmp24Q9R0S2 618 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Cldn13Q9Z0S4 211 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 F8Q06194 2319 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 H1f0P10922 194 aaKnown RBP13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 PpiaP17742 164 aaKnown RBP13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 A4gntQ14BT6 341 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Tmem158Q6F5E0 286 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr1509Q7TQQ0 308 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 H2-M10.3Q85ZW6 330 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Acp7Q8BX37 438 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Smim4Q8C1Q6 80 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr24Q8VFM9 313 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 1700034E13RikQ9D2T6 108 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Hacd1Q9QY80 281 aa13.82□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Lrp3E9Q1T6 790 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Gm9964E9Q9S5 144 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Tmem178bM0QWJ9 172 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 NdnP25233 325 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Gm826Q3UQ74 109 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Hoxc12Q8K5B8 280 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr788Q8VFI0 311 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Rbms1Q91W59 403 aaKnown RBP13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Mrpl43Q99N89 183 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Mid1ip1Q9CQ20 182 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Btbd35f23A0A0R4J2B9 498 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Vmn1r34G3XA52 309 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Asgr2P24721 301 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Foxb1Q64732 325 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Gm10600Q8BQ57 223 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Rfpl4aQ8VH31 287 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 EpcamQ99JW5 315 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Ca14Q9WVT6 337 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Prob1A0A087WR45 1010 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Vmn1r129E9QA94 307 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Gm8720K9J7F4 307 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 MdkP12025 140 aa13.81□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 VegfcP97953 415 aa13.81□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 87.5 ms