RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 Dazap1Q9JII5 406 aaKnown RBP3.45□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Stard10Q9JMD3 291 aa3.45□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Ndrg3Q9QYF9 375 aa3.45□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Syt8Q9R0N6 395 aa3.45□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Mbd2Q9Z2E1 414 aa3.45□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Ighv3-1A0A075B5S6 116 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Ighv1-37A0A0A6YW32 117 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 4930433I11RikA0A0U1RPT6 723 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Gm44501A8R0T9 150 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Tstd1E9PY03 133 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Gm10428J3QNV7 132 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Gm3696K7N751 203 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 BokO35425 213 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Aif1O70200 147 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Ntsr1O88319 424 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Ets2P15037 468 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Rfx3P48381 749 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Clec10aP49300 304 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Pou3f4P62515 361 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Rbp4Q00724 201 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Q0VG49 157 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Tmem120bQ3TA38 339 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Nr1d2Q60674 576 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Cdkn2dQ60773 166 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Rfx4Q7TNK1 735 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Serpina3fQ80X76 445 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Glrx5Q80Y14 152 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 McubQ810S1 345 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Phf11aQ8BVM9 293 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Slc25a41Q8BVN7 312 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Cnot2Q8C5L3 540 aaKnown RBP3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Klk14Q8CGR5 250 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Ints9Q8K114 658 aaKnown RBP3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Slc37a1Q8R070 531 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Olfr160Q8VGE3 309 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Olfr1417Q8VGJ6 315 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Taf9Q8VI33 264 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Q9CQF4 240 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Arpc2Q9CVB6 300 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Xcr1Q9R0M1 322 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Loxl3Q9Z175 754 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Notch1Q01705 2531 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Trav6n-7A0A075B6A6 116 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Tceal7A3KGA4 98 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Btbd8D3YUB6 377 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Gm15737D3YZR0 106 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Vmn2r101E9PZS9 857 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Gm10638F6QEG2 257 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Gm26661M0QWV4 156 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Casq2O09161 415 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 P01643 108 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 GfapP03995 430 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Gpx5P21765 221 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Bmi1P25916 324 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Lyl1P27792 278 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Lhx4P53776 390 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Rps27aP62983 156 aaKnown RBP3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Zfp729aQ4QQP3 973 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 HpQ61646 347 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Olfr452Q7TRV8 317 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Luzp2Q8BGY3 345 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Q8BR90 294 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Aqp6Q8C4A0 293 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Tfb1mQ8JZM0 345 aaKnown RBP3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Fam174bQ8K064 153 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Padi6Q8K3V4 682 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Cgref1Q8R1U2 281 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Vmn1r83Q8R287 306 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Abhd14bQ8VCR7 210 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Akr1d1Q8VCX1 325 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Olfr692Q8VF03 329 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Olfr308Q8VFP2 308 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Olfr1184Q8VG86 311 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Tmem19Q91W52 336 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 GzmnQ920S1 248 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Fam32aQ9CR80 112 aaKnown RBP3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Wdsub1Q9D0I6 474 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 UqcrbQ9D855 111 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 SmpxQ9DC77 85 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Sh3glb1Q9JK48 365 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Fbxw4Q9JMJ2 410 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Chst5Q9QUP4 395 aa3.44□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Ighv14-3A0A075B5R9 117 aa3.43□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Ighv9-3A0A0B4J1J5 117 aa3.43□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Gm15557A6PWY0 234 aa3.43□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Gm7257D3YX25 99 aa3.43□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Cd209gD3Z5D4 194 aa3.43□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Lipo4D3Z608 396 aa3.43□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Vmn1r77E9PY60 306 aa3.43□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Cpsf4lE9Q2N0 280 aa3.43□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Gm17728E9Q5K2 132 aa3.43□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Olfr370E9Q848 314 aa3.43□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 9130019O22RikG3X941 543 aa3.43□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Gm4778L7N229 365 aa3.43□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Bet1O35623 118 aa3.43□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 Gpr50O88495 591 aa3.43□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 P01796 113 aa3.43□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 P01797 113 aa3.43□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 P01799 113 aa3.43□□□□□ -1.86
Hmgb1-203ENSMUST00000110505 P01800 113 aa3.43□□□□□ -1.86
Retrieved 100 of 22,080 RNA–protein pairs in 229.7 ms