RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 TMEM108Q6UXF1 575 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 ACP7Q6ZNF0 438 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 TBC1D26Q86UD7 250 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 PIP4P2Q8N4L2 257 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 ZNF808Q8N4W9 903 aaPredicted RBP2.89□□□□□ -1.95
LIG4-205ENST00000614526 Q8NFD4 153 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 OR52L2PQ8NGH6 319 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 OR10J5Q8NHC4 309 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 LHFPL5Q8TAF8 219 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 PRR7Q8TB68 274 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 VRK1Q99986 396 aaPredicted RBP2.89□□□□□ -1.95
LIG4-205ENST00000614526 ZNF471Q9BX82 626 aaPredicted RBP2.89□□□□□ -1.95
LIG4-205ENST00000614526 SMIM3Q9BZL3 60 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 OR2S2Q9NQN1 319 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 RASL12Q9NYN1 266 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 RCC2Q9P258 522 aaKnown RBP2.89□□□□□ -1.95
LIG4-205ENST00000614526 KCNIP3Q9Y2W7 256 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 MEMO1Q9Y316 297 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 UBE2J1Q9Y385 318 aaPredicted RBP2.89□□□□□ -1.95
LIG4-205ENST00000614526 SVEP1Q4LDE5 3571 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 SPG11Q96JI7 2443 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 A0A0B4J2A0 478 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 A0A1W2PPE3 182 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 MSGN1A6NI15 193 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 ERVH48-1M5A8F1 160 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 RGS13O14921 159 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 CA11O75493 328 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 TUSC2O75896 110 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 CTSDP07339 412 aaPredicted RBP2.89□□□□□ -1.95
LIG4-205ENST00000614526 PSG2P11465 335 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 KITLGP21583 273 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 PSMB6P28072 239 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 PRDX2P32119 198 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 SELENOVP59797 346 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 TNFAIP6P98066 277 aaPredicted RBP2.89□□□□□ -1.95
LIG4-205ENST00000614526 DHODHQ02127 395 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 GNMTQ14749 295 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 MBNL2Q5VZF2 373 aaKnown RBP2.89□□□□□ -1.95
LIG4-205ENST00000614526 TMEM268Q5VZI3 342 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 PCSK4Q6UW60 755 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 UNQ6494/PRO21346Q6UXR6 183 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 MRGPRGQ86SM5 289 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 GCSAMQ8N6F7 178 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 CD177Q8N6Q3 437 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 GLYATL2Q8WU03 294 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 CCL17Q92583 94 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 LEAP2Q969E1 77 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 MOB3AQ96BX8 217 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 RRNAD1Q96FB5 475 aaKnown RBP2.89□□□□□ -1.95
LIG4-205ENST00000614526 MAGT1Q9H0U3 335 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 FAM234AQ9H0X4 552 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 PLK3Q9H4B4 646 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 NAA60Q9H7X0 242 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 SPACA1Q9HBV2 294 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 SHPKQ9UHJ6 478 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 KIR2DS1A0A191URI9 304 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 MED19A0JLT2 244 aaPredicted RBP2.89□□□□□ -1.95
LIG4-205ENST00000614526 CRYM-AS1A6NIL9 109 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 LYNX1G3V0Z9 82 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 MPPED1O15442 326 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 GYPAP02724 150 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 LYNX1P0DP58 116 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 IL2RGP31785 369 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 PPP1CCP36873 323 aaKnown RBP2.89□□□□□ -1.95
LIG4-205ENST00000614526 KIR2DS4P43632 304 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 LUMP51884 338 aaPredicted RBP2.89□□□□□ -1.95
LIG4-205ENST00000614526 CASP6P55212 293 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 NKX6-1P78426 367 aaPredicted RBP2.89□□□□□ -1.95
LIG4-205ENST00000614526 HLA-DRB3P79483 266 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 KLRB1Q12918 225 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 IL13RA2Q14627 380 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 KIR2DS1Q14954 304 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 NHLRC3Q5JS37 347 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 KRBOX4Q5JUW0 171 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 UTF1Q5T230 341 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 FAHD2BQ6P2I3 314 aaPredicted RBP2.89□□□□□ -1.95
LIG4-205ENST00000614526 BTNL3Q6UXE8 466 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 POC1AQ8NBT0 407 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 OR52M1Q8NGK5 317 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 OR13A1Q8NGR1 328 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 OR1S1Q8NH92 325 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 ARL11Q969Q4 196 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 FAHD2AQ96GK7 314 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 MEGF10Q96KG7 1140 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 CCL13Q99616 98 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 RNF126Q9BV68 326 aa2.89□□□□□ -1.95
LIG4-205ENST00000614526 MYOZ1Q9NP98 299 aaPredicted RBP2.89□□□□□ -1.95
LIG4-205ENST00000614526 IGKV1D-17A0A075B6S4 117 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 C3orf85A0A1B0GTC6 90 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 RNF222A6NCQ9 220 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 FAM90A10PA6NDY2 464 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 FAM90A18PA6NE21 464 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 FAM90A16PA6NEW6 464 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 FAM90A20PA6NIJ5 464 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 FAM90A8PA6NJQ4 464 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 FAM90A7PA6NKC0 464 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 TMEM210A6NLX4 147 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 DBX1A6NMT0 343 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 CEACAM18A8MTB9 384 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 FAM90A22PA8MWA6 464 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms