RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 FAM90A15PP0C7V4 464 aa10.82□□□□□ -0.68
CTSA-213ENST00000606782 FAM90A13PP0C7W8 464 aa10.82□□□□□ -0.68
CTSA-213ENST00000606782 FAM90A14PP0C7W9 464 aa10.82□□□□□ -0.68
CTSA-213ENST00000606782 FAM90A24PP0C7X0 464 aa10.82□□□□□ -0.68
CTSA-213ENST00000606782 KIR2DS4P43632 304 aa10.82□□□□□ -0.68
CTSA-213ENST00000606782 SCAND1P57086 179 aa10.82□□□□□ -0.68
CTSA-213ENST00000606782 ERVFRD-1P60508 538 aa10.82□□□□□ -0.68
CTSA-213ENST00000606782 DEFA6Q01524 100 aa10.82□□□□□ -0.68
CTSA-213ENST00000606782 COL10A1Q03692 680 aa10.82□□□□□ -0.68
CTSA-213ENST00000606782 ZNF273Q14593 569 aa10.82□□□□□ -0.68
CTSA-213ENST00000606782 PIGYQ3MUY2 71 aa10.82□□□□□ -0.68
CTSA-213ENST00000606782 IDNKQ5T6J7 187 aa10.82□□□□□ -0.68
CTSA-213ENST00000606782 C11orf88Q6PI97 169 aa10.82□□□□□ -0.68
CTSA-213ENST00000606782 OR4M1Q8NGD0 313 aa10.82□□□□□ -0.68
CTSA-213ENST00000606782 PIFOQ8TCI5 191 aa10.82□□□□□ -0.68
CTSA-213ENST00000606782 SNX22Q96L94 193 aa10.82□□□□□ -0.68
CTSA-213ENST00000606782 SELENOIQ9C0D9 397 aa10.82□□□□□ -0.68
CTSA-213ENST00000606782 LPAR5Q9H1C0 372 aa10.82□□□□□ -0.68
CTSA-213ENST00000606782 PPA2Q9H2U2 334 aa10.82□□□□□ -0.68
CTSA-213ENST00000606782 KCNK15Q9H427 330 aa10.82□□□□□ -0.68
CTSA-213ENST00000606782 RANBP3Q9H6Z4 567 aaPredicted RBP10.82□□□□□ -0.68
CTSA-213ENST00000606782 ABRACLQ9P1F3 81 aa10.82□□□□□ -0.68
CTSA-213ENST00000606782 A6NHS1 94 aa10.81□□□□□ -0.68
CTSA-213ENST00000606782 CCL3L1P16619 93 aa10.81□□□□□ -0.68
CTSA-213ENST00000606782 RAB6AP20340 208 aa10.81□□□□□ -0.68
CTSA-213ENST00000606782 SNU13P55769 128 aaKnown RBP10.81□□□□□ -0.68
CTSA-213ENST00000606782 PLA2G7Q13093 441 aa10.81□□□□□ -0.68
CTSA-213ENST00000606782 DYNC1I2Q13409 638 aaKnown RBP10.81□□□□□ -0.68
CTSA-213ENST00000606782 MPV17LQ2QL34 196 aa10.81□□□□□ -0.68
CTSA-213ENST00000606782 PDLIM3Q53GG5 364 aaPredicted RBP10.81□□□□□ -0.68
CTSA-213ENST00000606782 LIAT1Q6ZQX7 453 aa10.81□□□□□ -0.68
CTSA-213ENST00000606782 OR8H2Q8N162 312 aa10.81□□□□□ -0.68
CTSA-213ENST00000606782 CHST4Q8NCG5 386 aa10.81□□□□□ -0.68
CTSA-213ENST00000606782 PPP1R35Q8TAP8 253 aa10.81□□□□□ -0.68
CTSA-213ENST00000606782 DYNC2LI1Q8TCX1 351 aa10.81□□□□□ -0.68
CTSA-213ENST00000606782 FAM46BQ96A09 425 aa10.81□□□□□ -0.68
CTSA-213ENST00000606782 KCTD12Q96CX2 325 aaKnown RBP10.81□□□□□ -0.68
CTSA-213ENST00000606782 RAB18Q9NP72 206 aa10.81□□□□□ -0.68
CTSA-213ENST00000606782 ZNF581Q9P0T4 197 aa10.81□□□□□ -0.68
CTSA-213ENST00000606782 RSL24D1Q9UHA3 163 aaKnown RBP10.81□□□□□ -0.68
CTSA-213ENST00000606782 SPATA2Q9UM82 520 aa10.81□□□□□ -0.68
CTSA-213ENST00000606782 A0A0A6YYD4 124 aa10.8□□□□□ -0.68
CTSA-213ENST00000606782 TRAV24A0A0B4J272 114 aa10.8□□□□□ -0.68
CTSA-213ENST00000606782 ODF3BA8MYP8 253 aa10.8□□□□□ -0.68
CTSA-213ENST00000606782 H3BUI4 141 aa10.8□□□□□ -0.68
CTSA-213ENST00000606782 SLC33A1O00400 549 aaPredicted RBP10.8□□□□□ -0.68
CTSA-213ENST00000606782 PSPNO60542 156 aa10.8□□□□□ -0.68
CTSA-213ENST00000606782 NOL3O60936 208 aaKnown RBP10.8□□□□□ -0.68
CTSA-213ENST00000606782 GLAP06280 429 aa10.8□□□□□ -0.68
CTSA-213ENST00000606782 ZNF728P0DKX0 622 aa10.8□□□□□ -0.68
CTSA-213ENST00000606782 SNRPBP14678 240 aaKnown RBP10.8□□□□□ -0.68
CTSA-213ENST00000606782 ZNF182P17025 639 aaPredicted RBP10.8□□□□□ -0.68
CTSA-213ENST00000606782 EFNB2P52799 333 aa10.8□□□□□ -0.68
CTSA-213ENST00000606782 MEF2CQ06413 473 aaPredicted RBP10.8□□□□□ -0.68
CTSA-213ENST00000606782 SCN1BQ07699 218 aa10.8□□□□□ -0.68
CTSA-213ENST00000606782 SIGIRRQ6IA17 410 aa10.8□□□□□ -0.68
CTSA-213ENST00000606782 DTX3Q8N9I9 347 aa10.8□□□□□ -0.68
CTSA-213ENST00000606782 OR11H6Q8NGC7 330 aa10.8□□□□□ -0.68
CTSA-213ENST00000606782 OR5H6Q8NGV6 325 aa10.8□□□□□ -0.68
CTSA-213ENST00000606782 URM1Q9BTM9 101 aaKnown RBP10.8□□□□□ -0.68
CTSA-213ENST00000606782 TMEM59Q9BXS4 323 aa10.8□□□□□ -0.68
CTSA-213ENST00000606782 TBL2Q9Y4P3 447 aaKnown RBP10.8□□□□□ -0.68
CTSA-213ENST00000606782 CCDC160A6NGH7 325 aa10.79□□□□□ -0.68
CTSA-213ENST00000606782 FOXI3A8MTJ6 420 aaPredicted RBP10.79□□□□□ -0.68
CTSA-213ENST00000606782 SIRPB1O00241 398 aa10.79□□□□□ -0.68
CTSA-213ENST00000606782 OR7C1O76099 320 aaPredicted RBP10.79□□□□□ -0.68
CTSA-213ENST00000606782 ZNF44P15621 663 aa10.79□□□□□ -0.68
CTSA-213ENST00000606782 FUT3P21217 361 aa10.79□□□□□ -0.68
CTSA-213ENST00000606782 LGALS4P56470 323 aa10.79□□□□□ -0.68
CTSA-213ENST00000606782 TMEM50BP56557 158 aa10.79□□□□□ -0.68
CTSA-213ENST00000606782 FAM189A2Q15884 450 aa10.79□□□□□ -0.68
CTSA-213ENST00000606782 FOXB2Q5VYV0 432 aa10.79□□□□□ -0.68
CTSA-213ENST00000606782 ZNF626Q68DY1 528 aa10.79□□□□□ -0.68
CTSA-213ENST00000606782 TCF23Q7RTU1 214 aa10.79□□□□□ -0.68
CTSA-213ENST00000606782 ASCC1Q8N9N2 400 aaKnown RBP10.79□□□□□ -0.68
CTSA-213ENST00000606782 SUMF2Q8NBJ7 301 aa10.79□□□□□ -0.68
CTSA-213ENST00000606782 OR4S1Q8NGB4 309 aa10.79□□□□□ -0.68
CTSA-213ENST00000606782 ACOT12Q8WYK0 555 aa10.79□□□□□ -0.68
CTSA-213ENST00000606782 CFHR4Q92496 578 aa10.79□□□□□ -0.68
CTSA-213ENST00000606782 MALSU1Q96EH3 234 aa10.79□□□□□ -0.68
CTSA-213ENST00000606782 NICN1Q9BSH3 213 aa10.79□□□□□ -0.68
CTSA-213ENST00000606782 SPACA1Q9HBV2 294 aa10.79□□□□□ -0.68
CTSA-213ENST00000606782 RCC2Q9P258 522 aaKnown RBP10.79□□□□□ -0.68
CTSA-213ENST00000606782 ETV7Q9Y603 341 aa10.79□□□□□ -0.68
CTSA-213ENST00000606782 NOTCH3Q9UM47 2321 aa10.78□□□□□ -0.68
CTSA-213ENST00000606782 SOCS1O15524 211 aa10.78□□□□□ -0.68
CTSA-213ENST00000606782 IGHV1-8P0DP01 117 aa10.78□□□□□ -0.68
CTSA-213ENST00000606782 GABRR1P24046 479 aa10.78□□□□□ -0.68
CTSA-213ENST00000606782 COX7A1P24310 79 aa10.78□□□□□ -0.68
CTSA-213ENST00000606782 ERP29P30040 261 aaKnown RBP10.78□□□□□ -0.68
CTSA-213ENST00000606782 OR3A1P47881 315 aa10.78□□□□□ -0.68
CTSA-213ENST00000606782 DYNLT3P51808 116 aa10.78□□□□□ -0.68
CTSA-213ENST00000606782 PAX5Q02548 391 aa10.78□□□□□ -0.68
CTSA-213ENST00000606782 HERPUD1Q15011 391 aa10.78□□□□□ -0.68
CTSA-213ENST00000606782 LY6EQ16553 131 aa10.78□□□□□ -0.68
CTSA-213ENST00000606782 C2orf68Q2NKX9 166 aa10.78□□□□□ -0.68
CTSA-213ENST00000606782 LDLRAD2Q5SZI1 272 aa10.78□□□□□ -0.68
CTSA-213ENST00000606782 GDPD3Q7L5L3 318 aa10.78□□□□□ -0.68
CTSA-213ENST00000606782 LHFPL4Q7Z7J7 247 aa10.78□□□□□ -0.68
CTSA-213ENST00000606782 DYNAPQ8N1N2 210 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms