RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 ERVS71-1P61550 626 aa15.2■□□□□ 0.02
GNE-204ENST00000539208 ZNF154Q13106 437 aa15.2■□□□□ 0.02
GNE-204ENST00000539208 SEC11CQ9BY50 192 aa15.2■□□□□ 0.02
GNE-204ENST00000539208 CEACAM4O75871 244 aa15.19■□□□□ 0.02
GNE-204ENST00000539208 WISP2O76076 250 aa15.19■□□□□ 0.02
GNE-204ENST00000539208 SPP1P10451 314 aa15.19■□□□□ 0.02
GNE-204ENST00000539208 MMP9P14780 707 aa15.19■□□□□ 0.02
GNE-204ENST00000539208 F2RP25116 425 aa15.19■□□□□ 0.02
GNE-204ENST00000539208 ARHGDIBP52566 201 aa15.19■□□□□ 0.02
GNE-204ENST00000539208 IGFBP7Q16270 282 aa15.19■□□□□ 0.02
GNE-204ENST00000539208 OR2C3Q8N628 320 aa15.19■□□□□ 0.02
GNE-204ENST00000539208 CNEP1R1Q8N9A8 125 aa15.19■□□□□ 0.02
GNE-204ENST00000539208 WDR31Q8NA23 367 aa15.19■□□□□ 0.02
GNE-204ENST00000539208 C9orf106Q8NAJ2 232 aa15.19■□□□□ 0.02
GNE-204ENST00000539208 TREM1Q9NP99 234 aa15.19■□□□□ 0.02
GNE-204ENST00000539208 PLSCR4Q9NRQ2 329 aa15.19■□□□□ 0.02
GNE-204ENST00000539208 F8W036 122 aa15.19■□□□□ 0.02
GNE-204ENST00000539208 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.19■□□□□ 0.02
GNE-204ENST00000539208 SH2D1BO14796 132 aa15.19■□□□□ 0.02
GNE-204ENST00000539208 ADAM20O43506 726 aa15.19■□□□□ 0.02
GNE-204ENST00000539208 ID3Q02535 119 aa15.19■□□□□ 0.02
GNE-204ENST00000539208 NHLH2Q02577 135 aa15.19■□□□□ 0.02
GNE-204ENST00000539208 ALKBH6Q3KRA9 238 aa15.19■□□□□ 0.02
GNE-204ENST00000539208 CLEC9AQ6UXN8 241 aa15.19■□□□□ 0.02
GNE-204ENST00000539208 KLF14Q8TD94 323 aaPredicted RBP15.19■□□□□ 0.02
GNE-204ENST00000539208 ESPL1Q14674 2120 aa15.18■□□□□ 0.02
GNE-204ENST00000539208 AHRRA9YTQ3 701 aa15.18■□□□□ 0.02
GNE-204ENST00000539208 C3orf80F5H4A9 247 aa15.18■□□□□ 0.02
GNE-204ENST00000539208 CDIPTO14735 213 aa15.18■□□□□ 0.02
GNE-204ENST00000539208 DANCRP0C864 163 aa15.18■□□□□ 0.02
GNE-204ENST00000539208 HOXC12P31275 282 aa15.18■□□□□ 0.02
GNE-204ENST00000539208 EWSR1Q01844 656 aaKnown RBP eCLIP15.18■□□□□ 0.02
GNE-204ENST00000539208 OR8G1Q15617 311 aa15.18■□□□□ 0.02
GNE-204ENST00000539208 SWI5Q1ZZU3 235 aa15.18■□□□□ 0.02
GNE-204ENST00000539208 PLPPR1Q8TBJ4 325 aa15.18■□□□□ 0.02
GNE-204ENST00000539208 ERRFI1Q9UJM3 462 aaPredicted RBP15.18■□□□□ 0.02
GNE-204ENST00000539208 WIPI2Q9Y4P8 454 aa15.18■□□□□ 0.02
GNE-204ENST00000539208 NXPH2O95156 264 aa15.18■□□□□ 0.02
GNE-204ENST00000539208 CD5P06127 495 aa15.18■□□□□ 0.02
GNE-204ENST00000539208 RAB5CP51148 216 aa15.18■□□□□ 0.02
GNE-204ENST00000539208 VWA1Q6PCB0 445 aa15.18■□□□□ 0.02
GNE-204ENST00000539208 Q6ZRG5 221 aa15.18■□□□□ 0.02
GNE-204ENST00000539208 PUSL1Q8N0Z8 303 aaKnown RBP15.18■□□□□ 0.02
GNE-204ENST00000539208 OR10V1Q8NGI7 309 aa15.18■□□□□ 0.02
GNE-204ENST00000539208 HES4Q9HCC6 221 aa15.18■□□□□ 0.02
GNE-204ENST00000539208 MBNL3Q9NUK0 354 aaKnown RBP15.18■□□□□ 0.02
GNE-204ENST00000539208 SIRPB1O00241 398 aa15.17■□□□□ 0.02
GNE-204ENST00000539208 SLC25A6P12236 298 aa15.17■□□□□ 0.02
GNE-204ENST00000539208 MUC1P15941 1255 aaPredicted RBP15.17■□□□□ 0.02
GNE-204ENST00000539208 ACSF3Q4G176 576 aaPredicted RBP15.17■□□□□ 0.02
GNE-204ENST00000539208 COMMD1Q8N668 190 aa15.17■□□□□ 0.02
GNE-204ENST00000539208 OR8G5Q8NG78 346 aa15.17■□□□□ 0.02
GNE-204ENST00000539208 AKR1E2Q96JD6 320 aa15.17■□□□□ 0.02
GNE-204ENST00000539208 GPHA2Q96T91 129 aa15.17■□□□□ 0.02
GNE-204ENST00000539208 SLC25A31Q9H0C2 315 aa15.17■□□□□ 0.02
GNE-204ENST00000539208 PLEKHF2Q9H8W4 249 aa15.17■□□□□ 0.02
GNE-204ENST00000539208 LYRM2Q9NU23 88 aaPredicted RBP15.17■□□□□ 0.02
GNE-204ENST00000539208 FAM186AA6NE01 2351 aa15.17■□□□□ 0.02
GNE-204ENST00000539208 ZNF891A8MT65 544 aaPredicted RBP15.17■□□□□ 0.02
GNE-204ENST00000539208 C1QTNF9BB2RNN3 333 aa15.17■□□□□ 0.02
GNE-204ENST00000539208 RNASEK-C17orf49H0YIS7 233 aa15.17■□□□□ 0.02
GNE-204ENST00000539208 NUPL2O15504 423 aaKnown RBP15.17■□□□□ 0.02
GNE-204ENST00000539208 ATF4P18848 351 aaPredicted RBP15.17■□□□□ 0.02
GNE-204ENST00000539208 MPV17P39210 176 aa15.17■□□□□ 0.02
GNE-204ENST00000539208 POLR2GP62487 172 aaKnown RBP eCLIP15.17■□□□□ 0.02
GNE-204ENST00000539208 GUCA2BQ16661 112 aa15.17■□□□□ 0.02
GNE-204ENST00000539208 DEFB109BQ30KR1 87 aa15.17■□□□□ 0.02
GNE-204ENST00000539208 TLNRD1Q9H1K6 362 aa15.17■□□□□ 0.02
GNE-204ENST00000539208 OTOGLQ3ZCN5 2332 aa15.16■□□□□ 0.02
GNE-204ENST00000539208 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.16■□□□□ 0.02
GNE-204ENST00000539208 TESK1Q15569 626 aa15.16■□□□□ 0.02
GNE-204ENST00000539208 CXorf66Q5JRM2 361 aaPredicted RBP15.16■□□□□ 0.02
GNE-204ENST00000539208 FIP1L1Q6UN15 594 aaKnown RBP15.16■□□□□ 0.02
GNE-204ENST00000539208 TMEM231Q9H6L2 316 aa15.16■□□□□ 0.02
GNE-204ENST00000539208 OBP2BQ9NPH6 170 aa15.16■□□□□ 0.02
GNE-204ENST00000539208 LUZP4Q9P127 313 aa15.16■□□□□ 0.02
GNE-204ENST00000539208 TAAR3PQ9P1P4 343 aa15.16■□□□□ 0.02
GNE-204ENST00000539208 OR1A1Q9P1Q5 309 aa15.16■□□□□ 0.02
GNE-204ENST00000539208 PURGQ9UJV8 347 aaKnown RBP15.16■□□□□ 0.02
GNE-204ENST00000539208 TRAPPC2LQ9UL33 140 aa15.16■□□□□ 0.02
GNE-204ENST00000539208 STRAPQ9Y3F4 350 aaKnown RBP15.16■□□□□ 0.02
GNE-204ENST00000539208 FAM24AA6NFZ4 105 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 FAM74A7A6NL05 159 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 H0YL77 283 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 TRIM77I1YAP6 450 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 TNFSF12O43508 249 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 PITX3O75364 302 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 LMO1P25800 156 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 ZNF169Q14929 603 aaPredicted RBP15.15■□□□□ 0.02
GNE-204ENST00000539208 HMGN3Q15651 99 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 FAM74A3Q4VXF1 159 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 IL1F10Q8WWZ1 152 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 CACNA1HO95180 2353 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 ARID1AO14497 2285 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 A0A1B0GU03 582 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 IGSF23A1L1A6 192 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 AGFG2O95081 481 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 IGLV2-14P01704 120 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 HEXAP06865 529 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 GRPP07492 148 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms