RNA–Protein interactions for RNA: ENST00000476855.5

PSMD4-211, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 1,232 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-211ENST00000476855 ING3Q9NXR8 418 aa13.12□□□□□ -0.31
PSMD4-211ENST00000476855 KLK11Q9UBX7 282 aa13.12□□□□□ -0.31
PSMD4-211ENST00000476855 ZNF230Q9UIE0 474 aaPredicted RBP13.12□□□□□ -0.31
PSMD4-211ENST00000476855 ODAMA1E959 279 aa13.11□□□□□ -0.31
PSMD4-211ENST00000476855 A8MXK9 166 aa13.11□□□□□ -0.31
PSMD4-211ENST00000476855 GPR37O15354 613 aa13.11□□□□□ -0.31
PSMD4-211ENST00000476855 IL2RGP31785 369 aa13.11□□□□□ -0.31
PSMD4-211ENST00000476855 EDDM3BP56851 147 aa13.11□□□□□ -0.31
PSMD4-211ENST00000476855 SRSF7Q16629 238 aaKnown RBP eCLIP13.11□□□□□ -0.31
PSMD4-211ENST00000476855 CR1LQ2VPA4 569 aa13.11□□□□□ -0.31
PSMD4-211ENST00000476855 HOGA1Q86XE5 327 aa13.11□□□□□ -0.31
PSMD4-211ENST00000476855 OR13A1Q8NGR1 328 aa13.11□□□□□ -0.31
PSMD4-211ENST00000476855 MAFIPQ8WZ33 124 aa13.11□□□□□ -0.31
PSMD4-211ENST00000476855 SNAPC3Q92966 411 aa13.11□□□□□ -0.31
PSMD4-211ENST00000476855 RAB39BQ96DA2 213 aa13.11□□□□□ -0.31
PSMD4-211ENST00000476855 THAP7Q9BT49 309 aaPredicted RBP13.11□□□□□ -0.31
PSMD4-211ENST00000476855 DCTN5Q9BTE1 182 aa13.11□□□□□ -0.31
PSMD4-211ENST00000476855 C19orf12Q9NSK7 152 aa13.11□□□□□ -0.31
PSMD4-211ENST00000476855 CLN8Q9UBY8 286 aa13.11□□□□□ -0.31
PSMD4-211ENST00000476855 IGKV1D-8A0A087WSZ0 117 aa13.1□□□□□ -0.31
PSMD4-211ENST00000476855 MEIKINA0A087WXM9 373 aa13.1□□□□□ -0.31
PSMD4-211ENST00000476855 TRAV39A0A0B4J263 110 aa13.1□□□□□ -0.31
PSMD4-211ENST00000476855 FUOMA2VDF0 154 aa13.1□□□□□ -0.31
PSMD4-211ENST00000476855 ORC5O43913 435 aa13.1□□□□□ -0.31
PSMD4-211ENST00000476855 RBBP9O75884 186 aa13.1□□□□□ -0.31
PSMD4-211ENST00000476855 CGB3P0DN86 165 aa13.1□□□□□ -0.31
PSMD4-211ENST00000476855 CGB7P0DN87 165 aa13.1□□□□□ -0.31
PSMD4-211ENST00000476855 IL7P13232 177 aa13.1□□□□□ -0.31
PSMD4-211ENST00000476855 RCC1P18754 421 aaPredicted RBP13.1□□□□□ -0.31
PSMD4-211ENST00000476855 RCVRNP35243 200 aa13.1□□□□□ -0.31
PSMD4-211ENST00000476855 GDNFP39905 211 aa13.1□□□□□ -0.31
PSMD4-211ENST00000476855 GNB2P62879 340 aa13.1□□□□□ -0.31
PSMD4-211ENST00000476855 MRPS15P82914 257 aaKnown RBP13.1□□□□□ -0.31
PSMD4-211ENST00000476855 SSBP1Q04837 148 aaKnown RBP13.1□□□□□ -0.31
PSMD4-211ENST00000476855 MEF2CQ06413 473 aaPredicted RBP13.1□□□□□ -0.31
PSMD4-211ENST00000476855 MOB1BQ7L9L4 216 aa13.1□□□□□ -0.31
PSMD4-211ENST00000476855 MAPK1IP1LQ8NDC0 245 aa13.1□□□□□ -0.31
PSMD4-211ENST00000476855 C8orf46Q8TAG6 207 aa13.1□□□□□ -0.31
PSMD4-211ENST00000476855 CCDC107Q8WV48 283 aa13.1□□□□□ -0.31
PSMD4-211ENST00000476855 CORO2AQ92828 525 aa13.1□□□□□ -0.31
PSMD4-211ENST00000476855 SSBP3Q9BWW4 388 aaPredicted RBP13.1□□□□□ -0.31
PSMD4-211ENST00000476855 CHMP1AQ9HD42 196 aaPredicted RBP13.1□□□□□ -0.31
PSMD4-211ENST00000476855 C22orf46C9J442 243 aa13.09□□□□□ -0.31
PSMD4-211ENST00000476855 RNF223E7ERA6 249 aa13.09□□□□□ -0.31
PSMD4-211ENST00000476855 PHF1O43189 567 aaPredicted RBP13.09□□□□□ -0.31
PSMD4-211ENST00000476855 IFITM3Q01628 133 aa13.09□□□□□ -0.31
PSMD4-211ENST00000476855 HMGN3Q15651 99 aa13.09□□□□□ -0.31
PSMD4-211ENST00000476855 ESCO2Q56NI9 601 aa13.09□□□□□ -0.31
PSMD4-211ENST00000476855 BTN2A1Q7KYR7 527 aa13.09□□□□□ -0.31
PSMD4-211ENST00000476855 C5orf24Q7Z6I8 188 aa13.09□□□□□ -0.31
PSMD4-211ENST00000476855 H1FXQ92522 213 aaKnown RBP13.09□□□□□ -0.31
PSMD4-211ENST00000476855 DACT3Q96B18 629 aaPredicted RBP13.09□□□□□ -0.31
PSMD4-211ENST00000476855 IFT46Q9NQC8 304 aa13.09□□□□□ -0.31
PSMD4-211ENST00000476855 TRAPPC2LQ9UL33 140 aa13.09□□□□□ -0.31
PSMD4-211ENST00000476855 LINC00312Q9Y6C7 94 aa13.09□□□□□ -0.31
PSMD4-211ENST00000476855 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.08□□□□□ -0.313e-6■■■□□ 16
PSMD4-211ENST00000476855 ANK2Q01484 3957 aa13.08□□□□□ -0.31
PSMD4-211ENST00000476855 TRBV23-1A0A0A0MS06 115 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 ANKRD20A5PA0PJZ0 165 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 FAM157AC9JC47 383 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 UPK1BO75841 260 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 FCER2P06734 321 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 USF1P22415 310 aaPredicted RBP13.08□□□□□ -0.32
PSMD4-211ENST00000476855 ZFP36P26651 326 aaKnown RBP13.08□□□□□ -0.32
PSMD4-211ENST00000476855 GLP1RP43220 463 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 ACTBP60709 375 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 RPL31P62899 125 aaKnown RBP13.08□□□□□ -0.32
PSMD4-211ENST00000476855 ACTG1P63261 375 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 HLA-DRB3P79483 266 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 PAX2Q02962 417 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 ZNF273Q14593 569 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 C11orf91Q3C1V1 193 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 OR52W1Q6IF63 320 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 LYSMD2Q8IV50 215 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 LY6G5BQ8NDX9 201 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 BEST4Q8NFU0 473 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 SETD6Q8TBK2 473 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 MRGPRDQ8TDS7 321 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 BORCS5Q969J3 196 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 C1orf159Q96HA4 380 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 ST6GALNAC5Q9BVH7 336 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 ZNF286AQ9HBT8 521 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 OR6C3Q9NZP0 311 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 LPAR3Q9UBY5 353 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 ZNF107Q9UII5 783 aaPredicted RBP13.08□□□□□ -0.32
PSMD4-211ENST00000476855 RPUSD1Q9UJJ7 312 aaKnown RBP13.08□□□□□ -0.32
PSMD4-211ENST00000476855 POLR3KQ9Y2Y1 108 aaPredicted RBP13.08□□□□□ -0.32
PSMD4-211ENST00000476855 WNK2Q9Y3S1 2297 aa13.08□□□□□ -0.32
PSMD4-211ENST00000476855 A0A1W2PQ09 198 aa13.07□□□□□ -0.32
PSMD4-211ENST00000476855 hADV38S2A0JD32 116 aa13.07□□□□□ -0.32
PSMD4-211ENST00000476855 MEX3AA1L020 520 aaKnown RBP13.07□□□□□ -0.32
PSMD4-211ENST00000476855 C12orf77C9JDV5 145 aa13.07□□□□□ -0.32
PSMD4-211ENST00000476855 C15orf65H3BRN8 121 aa13.07□□□□□ -0.32
PSMD4-211ENST00000476855 ECDO95905 644 aaPredicted RBP13.07□□□□□ -0.32
PSMD4-211ENST00000476855 DLX6P56179 175 aa13.07□□□□□ -0.32
PSMD4-211ENST00000476855 LOXL1Q08397 574 aaPredicted RBP13.07□□□□□ -0.32
PSMD4-211ENST00000476855 KLF9Q13886 244 aaPredicted RBP13.07□□□□□ -0.32
PSMD4-211ENST00000476855 C6orf183Q5T699 404 aa13.07□□□□□ -0.32
PSMD4-211ENST00000476855 TMEM200BQ69YZ2 307 aa13.07□□□□□ -0.32
PSMD4-211ENST00000476855 TRAT1Q6PIZ9 186 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms