RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 ERVFRD-1P60508 538 aa13.72□□□□□ -0.21
CCNA1-203ENST00000625767 ZNF273Q14593 569 aa13.72□□□□□ -0.21
CCNA1-203ENST00000625767 ESCO2Q56NI9 601 aa13.72□□□□□ -0.21
CCNA1-203ENST00000625767 GAPTQ8N292 157 aa13.72□□□□□ -0.21
CCNA1-203ENST00000625767 OR5D13Q8NGL4 314 aa13.72□□□□□ -0.21
CCNA1-203ENST00000625767 OR13A1Q8NGR1 328 aa13.72□□□□□ -0.21
CCNA1-203ENST00000625767 ABCA1O95477 2261 aa13.72□□□□□ -0.21
CCNA1-203ENST00000625767 TLN2Q9Y4G6 2542 aa13.71□□□□□ -0.21
CCNA1-203ENST00000625767 MEIKINA0A087WXM9 373 aa13.71□□□□□ -0.21
CCNA1-203ENST00000625767 SERPINE3A8MV23 424 aa13.71□□□□□ -0.21
CCNA1-203ENST00000625767 GLAP06280 429 aa13.71□□□□□ -0.21
CCNA1-203ENST00000625767 ETV6P41212 452 aa13.71□□□□□ -0.21
CCNA1-203ENST00000625767 GNG2P59768 71 aa13.71□□□□□ -0.21
CCNA1-203ENST00000625767 SPANXN2Q5MJ10 180 aa13.71□□□□□ -0.21
CCNA1-203ENST00000625767 SLC35E4Q6ICL7 350 aa13.71□□□□□ -0.21
CCNA1-203ENST00000625767 OR52I2Q8NH67 350 aa13.71□□□□□ -0.21
CCNA1-203ENST00000625767 PPP1R35Q8TAP8 253 aa13.71□□□□□ -0.21
CCNA1-203ENST00000625767 MRGPRDQ8TDS7 321 aa13.71□□□□□ -0.21
CCNA1-203ENST00000625767 RAB39BQ96DA2 213 aa13.71□□□□□ -0.21
CCNA1-203ENST00000625767 SDHCQ99643 169 aaPredicted RBP13.71□□□□□ -0.21
CCNA1-203ENST00000625767 CHMP1AQ9HD42 196 aaPredicted RBP13.71□□□□□ -0.21
CCNA1-203ENST00000625767 MMP26Q9NRE1 261 aa13.71□□□□□ -0.21
CCNA1-203ENST00000625767 CSPG4Q6UVK1 2322 aa13.7□□□□□ -0.22
CCNA1-203ENST00000625767 IGKV1D-8A0A087WSZ0 117 aa13.7□□□□□ -0.22
CCNA1-203ENST00000625767 ODAMA1E959 279 aa13.7□□□□□ -0.22
CCNA1-203ENST00000625767 H7C1Q1 480 aa13.7□□□□□ -0.22
CCNA1-203ENST00000625767 LANCL1O43813 399 aa13.7□□□□□ -0.22
CCNA1-203ENST00000625767 FCGR3AP08637 254 aa13.7□□□□□ -0.22
CCNA1-203ENST00000625767 INHBBP09529 407 aa13.7□□□□□ -0.22
CCNA1-203ENST00000625767 CD3GP09693 182 aa13.7□□□□□ -0.22
CCNA1-203ENST00000625767 CCL3L1P16619 93 aa13.7□□□□□ -0.22
CCNA1-203ENST00000625767 RPL31P62899 125 aaKnown RBP13.7□□□□□ -0.22
CCNA1-203ENST00000625767 LOXL1Q08397 574 aaPredicted RBP13.7□□□□□ -0.22
CCNA1-203ENST00000625767 LSAMPQ13449 338 aa13.7□□□□□ -0.22
CCNA1-203ENST00000625767 PYHIN1Q6K0P9 492 aa13.7□□□□□ -0.22
CCNA1-203ENST00000625767 TRAPPC6BQ86SZ2 158 aa13.7□□□□□ -0.22
CCNA1-203ENST00000625767 FAM185AQ8N0U4 392 aa13.7□□□□□ -0.22
CCNA1-203ENST00000625767 SETD6Q8TBK2 473 aa13.7□□□□□ -0.22
CCNA1-203ENST00000625767 C12orf4Q9NQ89 552 aa13.7□□□□□ -0.22
CCNA1-203ENST00000625767 TMEM30CPA0ZSE6 113 aa13.69□□□□□ -0.22
CCNA1-203ENST00000625767 SMAD7O15105 426 aaKnown RBP13.69□□□□□ -0.22
CCNA1-203ENST00000625767 ERP29P30040 261 aaKnown RBP13.69□□□□□ -0.22
CCNA1-203ENST00000625767 PRSS3P35030 304 aa13.69□□□□□ -0.22
CCNA1-203ENST00000625767 GLP1RP43220 463 aa13.69□□□□□ -0.22
CCNA1-203ENST00000625767 KCNJ3P48549 501 aa13.69□□□□□ -0.22
CCNA1-203ENST00000625767 DLX1P56177 255 aa13.69□□□□□ -0.22
CCNA1-203ENST00000625767 PAX2Q02962 417 aa13.69□□□□□ -0.22
CCNA1-203ENST00000625767 PNLIPRP3Q17RR3 467 aa13.69□□□□□ -0.22
CCNA1-203ENST00000625767 TMEM200BQ69YZ2 307 aa13.69□□□□□ -0.22
CCNA1-203ENST00000625767 SRRQ9GZT4 340 aa13.69□□□□□ -0.22
CCNA1-203ENST00000625767 KLK11Q9UBX7 282 aa13.69□□□□□ -0.22
CCNA1-203ENST00000625767 RPUSD1Q9UJJ7 312 aaKnown RBP13.69□□□□□ -0.22
CCNA1-203ENST00000625767 A8MXK9 166 aa13.69□□□□□ -0.22
CCNA1-203ENST00000625767 SSTR5P35346 364 aa13.69□□□□□ -0.22
CCNA1-203ENST00000625767 NPY4RP50391 375 aa13.69□□□□□ -0.22
CCNA1-203ENST00000625767 PAX5Q02548 391 aa13.69□□□□□ -0.22
CCNA1-203ENST00000625767 PRB3Q04118 309 aaPredicted RBP13.69□□□□□ -0.22
CCNA1-203ENST00000625767 PYDC2Q56P42 97 aa13.69□□□□□ -0.22
CCNA1-203ENST00000625767 FAM53AQ6NSI3 398 aaPredicted RBP13.69□□□□□ -0.22
CCNA1-203ENST00000625767 GPX8Q8TED1 209 aa13.69□□□□□ -0.22
CCNA1-203ENST00000625767 DACT3Q96B18 629 aaPredicted RBP13.69□□□□□ -0.22
CCNA1-203ENST00000625767 ST6GALNAC5Q9BVH7 336 aa13.69□□□□□ -0.22
CCNA1-203ENST00000625767 TRAPPC2LQ9UL33 140 aa13.69□□□□□ -0.22
CCNA1-203ENST00000625767 HIVEP1P15822 2718 aa13.68□□□□□ -0.22
CCNA1-203ENST00000625767 LOC105371242A0A075B767 164 aa13.68□□□□□ -0.22
CCNA1-203ENST00000625767 H3BUI4 141 aa13.68□□□□□ -0.22
CCNA1-203ENST00000625767 J3QRK9 145 aa13.68□□□□□ -0.22
CCNA1-203ENST00000625767 OMGP23515 440 aa13.68□□□□□ -0.22
CCNA1-203ENST00000625767 TMEM249Q2WGJ8 235 aa13.68□□□□□ -0.22
CCNA1-203ENST00000625767 OR52W1Q6IF63 320 aa13.68□□□□□ -0.22
CCNA1-203ENST00000625767 ZNF880Q6PDB4 577 aa13.68□□□□□ -0.22
CCNA1-203ENST00000625767 PRR18Q8N4B5 295 aa13.68□□□□□ -0.22
CCNA1-203ENST00000625767 SNAPC3Q92966 411 aa13.68□□□□□ -0.22
CCNA1-203ENST00000625767 Q9N2K0 584 aa13.68□□□□□ -0.22
CCNA1-203ENST00000625767 A0A1W2PQ09 198 aa13.67□□□□□ -0.22
CCNA1-203ENST00000625767 CA11O75493 328 aa13.67□□□□□ -0.22
CCNA1-203ENST00000625767 IGHV4-31P0DP07 118 aa13.67□□□□□ -0.22
CCNA1-203ENST00000625767 ARL6IP1Q15041 203 aa13.67□□□□□ -0.22
CCNA1-203ENST00000625767 BAK1Q16611 211 aa13.67□□□□□ -0.22
CCNA1-203ENST00000625767 UTF1Q5T230 341 aa13.67□□□□□ -0.22
CCNA1-203ENST00000625767 BAIAP2L2Q6UXY1 529 aa13.67□□□□□ -0.22
CCNA1-203ENST00000625767 LY6G5BQ8NDX9 201 aa13.67□□□□□ -0.22
CCNA1-203ENST00000625767 RFESDQ8TAC1 157 aa13.67□□□□□ -0.22
CCNA1-203ENST00000625767 MSI2Q96DH6 328 aaKnown RBP13.67□□□□□ -0.22
CCNA1-203ENST00000625767 MBNL3Q9NUK0 354 aaKnown RBP13.67□□□□□ -0.22
CCNA1-203ENST00000625767 PPIAL4CA0A0B4J2A2 164 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 C12orf77C9JDV5 145 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 MMP23AO75900 390 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 LPLP06858 475 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 SCTP09683 121 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 PPIAL4GP0DN37 164 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 GDNFP39905 211 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 MRPS15P82914 257 aaKnown RBP13.66□□□□□ -0.22
CCNA1-203ENST00000625767 C17orf58Q2M2W7 97 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 LINC00299Q6ZSB3 139 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 C8orf46Q8TAG6 207 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 SMIM4Q8WVI0 70 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 ANK3Q12955 4377 aaKnown RBP13.66□□□□□ -0.22
CCNA1-203ENST00000625767 TRBV6-6A0A0A6YYG2 114 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 C15orf65H3BRN8 121 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms