RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 SNRPGP15A8MWD9 76 aa14.82□□□□□ -0.04
SHKBP1-224ENST00000600718 PSPNO60542 156 aa14.82□□□□□ -0.04
SHKBP1-224ENST00000600718 SLC22A5O76082 557 aa14.82□□□□□ -0.04
SHKBP1-224ENST00000600718 VSIG10L2P0DP72 767 aa14.82□□□□□ -0.04
SHKBP1-224ENST00000600718 COL10A1Q03692 680 aa14.82□□□□□ -0.04
SHKBP1-224ENST00000600718 CD177Q8N6Q3 437 aa14.82□□□□□ -0.04
SHKBP1-224ENST00000600718 OR5T2Q8NGG2 359 aa14.82□□□□□ -0.04
SHKBP1-224ENST00000600718 MED28Q9H204 178 aa14.82□□□□□ -0.04
SHKBP1-224ENST00000600718 SAP30LQ9HAJ7 183 aa14.82□□□□□ -0.04
SHKBP1-224ENST00000600718 PRELID1Q9Y255 219 aa14.82□□□□□ -0.04
SHKBP1-224ENST00000600718 VSIG4Q9Y279 399 aa14.82□□□□□ -0.04
SHKBP1-224ENST00000600718 CACNA1BQ00975 2339 aa14.81□□□□□ -0.04
SHKBP1-224ENST00000600718 SMLR1H3BR10 107 aa14.81□□□□□ -0.04
SHKBP1-224ENST00000600718 ECI1P42126 302 aa14.81□□□□□ -0.04
SHKBP1-224ENST00000600718 C20orf204Q6ZNR8 217 aa14.81□□□□□ -0.04
SHKBP1-224ENST00000600718 MOB1BQ7L9L4 216 aa14.81□□□□□ -0.04
SHKBP1-224ENST00000600718 OR8H1Q8NGG4 311 aa14.81□□□□□ -0.04
SHKBP1-224ENST00000600718 NARFLQ9H6Q4 476 aa14.81□□□□□ -0.04
SHKBP1-224ENST00000600718 RANBP3Q9H6Z4 567 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-224ENST00000600718 USP24Q9UPU5 2620 aa14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 IGKV1D-17A0A075B6S4 117 aa14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 FABP7O15540 132 aa14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 HPXP02790 462 aa14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 CTXN2P0C2S0 81 aa14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 RBMXP38159 391 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 AADACL3Q5VUY0 350 aa14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 CD276Q5ZPR3 534 aa14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 ZNF660Q6AZW8 331 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 SLC35E4Q6ICL7 350 aa14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 TMED4Q7Z7H5 227 aa14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 SLC51BQ86UW2 128 aa14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 MARCH1Q8TCQ1 289 aa14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 SEC22CQ9BRL7 303 aa14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 ZNF2Q9BSG1 426 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 FBXO9Q9UK97 447 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 GPR132Q9UNW8 380 aa14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 IGHV3OR15-7A0A075B7D8 119 aa14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 TMEM30CPA0ZSE6 113 aa14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 CREBL2O60519 120 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 CYB5R3P00387 301 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 FPR2P25090 351 aa14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 CD80P33681 288 aa14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 NPY4RP50391 375 aa14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 ATXN7L3Q14CW9 347 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 SURF2Q15527 256 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 C17orf107Q6ZR85 190 aa14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 SLC25A42Q86VD7 318 aa14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 PPP1R35Q8TAP8 253 aa14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 METRNQ9UJH8 293 aa14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 TRAPPC2LQ9UL33 140 aa14.8□□□□□ -0.04
SHKBP1-224ENST00000600718 SCTP09683 121 aa14.79□□□□□ -0.04
SHKBP1-224ENST00000600718 MUC1P15941 1255 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-224ENST00000600718 IGFBP2P18065 325 aa14.79□□□□□ -0.04
SHKBP1-224ENST00000600718 GLP1RP43220 463 aa14.79□□□□□ -0.04
SHKBP1-224ENST00000600718 GABRA2P47869 451 aa14.79□□□□□ -0.04
SHKBP1-224ENST00000600718 OR3A1P47881 315 aa14.79□□□□□ -0.04
SHKBP1-224ENST00000600718 ZNF626Q68DY1 528 aa14.79□□□□□ -0.04
SHKBP1-224ENST00000600718 TEX261Q6UWH6 196 aa14.79□□□□□ -0.04
SHKBP1-224ENST00000600718 C1orf87Q8N0U7 546 aa14.79□□□□□ -0.04
SHKBP1-224ENST00000600718 SNX22Q96L94 193 aa14.79□□□□□ -0.04
SHKBP1-224ENST00000600718 ZNF222Q9UK12 451 aa14.79□□□□□ -0.04
SHKBP1-224ENST00000600718 U3KQ87 197 aa14.79□□□□□ -0.04
SHKBP1-224ENST00000600718 OR5H14A6NHG9 310 aa14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 C19orf84I3L1E1 186 aa14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 SSNA1O43805 119 aa14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 C1QL1O75973 258 aa14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 OR4E1P0C645 316 aa14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 RCC1P18754 421 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 HLA-DRB3P79483 266 aa14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 C4orf46Q504U0 113 aa14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 TEX36Q5VZQ5 186 aa14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 FAHD2BQ6P2I3 314 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 PEG10Q86TG7 708 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 OR4A4PQ8NGN8 299 aa14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 LRRC20Q8TCA0 184 aa14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 ZNF431Q8TF32 576 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 FAHD2AQ96GK7 314 aa14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 SHARPINQ9H0F6 387 aa14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 MBNL3Q9NUK0 354 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 CHD3Q12873 2000 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 DIDO1Q9BTC0 2240 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 ZNF737O75373 536 aa14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 TFF1P04155 84 aa14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 FCGR2CP31995 323 aa14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 TAS2R31P59538 309 aa14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 TAGLNQ01995 201 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 PAX5Q02548 391 aa14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 IGSF11Q5DX21 431 aa14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 FAM201AQ5SY85 155 aa14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 TMEM185AQ8NFB2 350 aa14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 ZNF69Q9UC07 566 aa14.78□□□□□ -0.04
SHKBP1-224ENST00000600718 NBASA2RRP1 2371 aa14.77□□□□□ -0.04
SHKBP1-224ENST00000600718 OOEPA6NGQ2 149 aa14.77□□□□□ -0.04
SHKBP1-224ENST00000600718 TK1P04183 234 aa14.77□□□□□ -0.04
SHKBP1-224ENST00000600718 PPOXP50336 477 aa14.77□□□□□ -0.04
SHKBP1-224ENST00000600718 SEC61A1P61619 476 aaKnown RBP14.77□□□□□ -0.04
SHKBP1-224ENST00000600718 FCN2Q15485 313 aa14.77□□□□□ -0.04
SHKBP1-224ENST00000600718 STUMQ69YW2 141 aa14.77□□□□□ -0.04
SHKBP1-224ENST00000600718 TGIF2LYQ8IUE0 185 aa14.77□□□□□ -0.04
SHKBP1-224ENST00000600718 ZNF680Q8NEM1 530 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms