RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 CNIH2Q6PI25 160 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 RFLNAQ6ZTI6 216 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 P2RY8Q86VZ1 359 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 C10orf107Q8IVU9 208 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 OR4F15Q8NGB8 312 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 OR51G1Q8NGK1 321 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 OR2T29Q8NH02 315 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 CHCHD10Q8WYQ3 142 aaPredicted RBP4.69□□□□□ -1.66
MRE11-209ENST00000540013 MRAP2Q96G30 205 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 PRAC1Q96KF2 57 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 C18orf12Q96KH6 178 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 OLFM3Q96PB7 478 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 SMIM14Q96QK8 99 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 OR2M4Q96R27 311 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 SH3GL3Q99963 347 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 TLNRD1Q9H1K6 362 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 C20orf85Q9H1P6 137 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 ABCB9Q9NP78 766 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 BATF3Q9NR55 127 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 FBXO8Q9NRD0 319 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 OR1A1Q9P1Q5 309 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 SHPKQ9UHJ6 478 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 RAB26Q9ULW5 256 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 KCNE3Q9Y6H6 103 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 CNTRLQ7Z7A1 2325 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 ANKRD12Q6UB98 2062 aa4.69□□□□□ -1.66
MRE11-209ENST00000540013 RP1L1Q8IWN7 2480 aaPredicted RBP4.69□□□□□ -1.66
MRE11-209ENST00000540013 TLN1Q9Y490 2541 aaKnown RBP4.69□□□□□ -1.66
MRE11-209ENST00000540013 IFITM10A6NMD0 228 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 EFCAB9A8MZ26 197 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 C2orf74A8MZ97 194 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 F5H5K5 113 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 FGF17O60258 216 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 CST8O60676 142 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 ZG16O60844 167 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 CTNSO60931 367 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 ENTPD6O75354 484 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 TNFSF15O95150 251 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 RENP00797 406 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 HPNP05981 417 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 MELTFP08582 738 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 CD37P11049 281 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 GRPRP30550 384 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 SSTR5P35346 364 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 IFNGR2P38484 337 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 CDKN2BP42772 138 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 SPINT3P49223 89 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 APOC4P55056 127 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 NUTF2P61970 127 aaKnown RBP4.68□□□□□ -1.66
MRE11-209ENST00000540013 RPL32P62910 135 aaKnown RBP4.68□□□□□ -1.66
MRE11-209ENST00000540013 DYNLT1P63172 113 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 SLC35A1P78382 337 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 TAF1AQ15573 450 aaPredicted RBP4.68□□□□□ -1.66
MRE11-209ENST00000540013 LTB4RQ15722 352 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 PYCR3Q53H96 274 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 TFDP3Q5H9I0 405 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 HENMT1Q5T8I9 393 aaKnown RBP4.68□□□□□ -1.66
MRE11-209ENST00000540013 FAM131AQ6UXB0 335 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 MRPL55Q7Z7F7 128 aaKnown RBP4.68□□□□□ -1.66
MRE11-209ENST00000540013 LYG2Q86SG7 212 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 MYPOPQ86VE0 399 aaPredicted RBP4.68□□□□□ -1.66
MRE11-209ENST00000540013 C17orf82Q86X59 251 aaPredicted RBP4.68□□□□□ -1.66
MRE11-209ENST00000540013 SLC30A8Q8IWU4 369 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 SKA3Q8IX90 412 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 GAPTQ8N292 157 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 CBR4Q8N4T8 237 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 OR10G3Q8NGC4 313 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 STOML3Q8TAV4 291 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 TAF15Q92804 592 aaKnown RBP eCLIP4.68□□□□□ -1.66
MRE11-209ENST00000540013 DDIT4LQ96D03 193 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 COX14Q96I36 57 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 TEAD3Q99594 435 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 DHRS9Q9BPW9 319 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 RIOK2Q9BVS4 552 aaKnown RBP4.68□□□□□ -1.66
MRE11-209ENST00000540013 SLC19A3Q9BZV2 496 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 SLC22A4Q9H015 551 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 EXOSC4Q9NPD3 245 aaKnown RBP4.68□□□□□ -1.66
MRE11-209ENST00000540013 SLC7A11Q9UPY5 501 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 ST3GAL6Q9Y274 331 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 VSIG4Q9Y279 399 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 FARSAQ9Y285 508 aaKnown RBP4.68□□□□□ -1.66
MRE11-209ENST00000540013 CCDC88CQ9P219 2028 aa4.68□□□□□ -1.66
MRE11-209ENST00000540013 SMG1Q96Q15 3661 aaKnown RBP4.67□□□□□ -1.66
MRE11-209ENST00000540013 HELZ2Q9BYK8 2649 aaKnown RBP4.67□□□□□ -1.66
MRE11-209ENST00000540013 MED13Q9UHV7 2174 aa4.67□□□□□ -1.66
MRE11-209ENST00000540013 PCM1Q15154 2024 aa4.67□□□□□ -1.66
MRE11-209ENST00000540013 hCG_1818297A0A087WSY0 165 aa4.67□□□□□ -1.66
MRE11-209ENST00000540013 A0A0G2JRQ6 117 aa4.67□□□□□ -1.66
MRE11-209ENST00000540013 C12orf77C9JDV5 145 aa4.67□□□□□ -1.66
MRE11-209ENST00000540013 TAAR5O14804 337 aa4.67□□□□□ -1.66
MRE11-209ENST00000540013 PIRTP0C851 137 aa4.67□□□□□ -1.66
MRE11-209ENST00000540013 GDF1P27539 372 aa4.67□□□□□ -1.66
MRE11-209ENST00000540013 ALDH3A1P30838 453 aa4.67□□□□□ -1.66
MRE11-209ENST00000540013 RND2P52198 227 aa4.67□□□□□ -1.66
MRE11-209ENST00000540013 RIDAP52758 137 aaKnown RBP4.67□□□□□ -1.66
MRE11-209ENST00000540013 KRR1Q13601 381 aaKnown RBP4.67□□□□□ -1.66
MRE11-209ENST00000540013 FAM53BQ14153 422 aa4.67□□□□□ -1.66
MRE11-209ENST00000540013 CHRFAM7AQ494W8 412 aa4.67□□□□□ -1.66
MRE11-209ENST00000540013 FAM182AQ5T1J6 154 aa4.67□□□□□ -1.66
MRE11-209ENST00000540013 SYT6Q5T7P8 510 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms