RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 BEST3Q8N1M1 668 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 AMER3Q8N944 861 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR2T12Q8NG77 320 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR4D11Q8NGI4 311 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR2Y1Q8NGV0 311 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR2T29Q8NH02 315 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 FAM110BQ8TC76 370 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 DOK4Q8TEW6 326 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 PSMF1Q92530 271 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 FAM131CQ96AQ9 280 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 APH1AQ96BI3 265 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 IMP4Q96G21 291 aaKnown RBP3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 GPR82Q96P67 336 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 TSSK3Q96PN8 268 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 SIGLEC12Q96PQ1 595 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 ATF6BQ99941 703 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 FAIM2Q9BWQ8 316 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 ULBP2Q9BZM5 246 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 POLR2J2Q9GZM3 115 aaKnown RBP3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 TCEAL2Q9H3H9 227 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 ZDHHC11Q9H8X9 412 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 APOBEC3GQ9HC16 384 aaKnown RBP3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 LYRM4Q9HD34 91 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 A4GALTQ9NPC4 353 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 MEPEQ9NQ76 525 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 SDR39U1Q9NRG7 319 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 CISHQ9NSE2 258 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 ONECUT1Q9UBC0 465 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 MRPS33Q9Y291 106 aaKnown RBP3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 MRPS28Q9Y2Q9 187 aaKnown RBP3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 RPL36Q9Y3U8 105 aaKnown RBP3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 WIPI2Q9Y4P8 454 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 TSSC4Q9Y5U2 329 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 MICAL3Q7RTP6 2002 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 PARP14Q460N5 1801 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 TRBV24-1A0A075B6N3 115 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 C1orf226A1L170 272 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 GLOD5A6NK44 160 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 FAM183AA6NL82 134 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 FAM220BPB1ANY3 271 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 C5orf67F2Z3F1 127 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 GABARAPH6UMI1 98 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 P2RY10O00398 339 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 PTGESO14684 152 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 P2RX6O15547 441 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 XRCC2O43543 280 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 SYNGR3O43761 229 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 FCMRO60667 390 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 NDUFB6O95139 128 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 TRUB2O95900 331 aaKnown RBP3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 HAND1O96004 215 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 APOC2P02655 101 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 MMP7P09237 267 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR4A8P0C604 315 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 CXCL8P10145 99 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 CD99P14209 185 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 FUT3P21217 361 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 ATP6V0CP27449 155 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 GDF1P27539 372 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 SLC6A6P31641 620 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 GUCA1AP43080 201 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 SULT1A2P50226 295 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 UCP2P55851 309 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR12D2P58182 307 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 OSTNP61366 133 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 GNG3P63215 75 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 PAFAH1B2P68402 229 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 SRPXP78539 464 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 ZFP36L1Q07352 338 aaKnown RBP3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 DHRS2Q13268 280 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 SYPL1Q16563 259 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 MRPL54Q6P161 138 aaKnown RBP3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 CD200R1LQ6Q8B3 271 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 TOMM20LQ6UXN7 152 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 MOB1BQ7L9L4 216 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 H2BFWTQ7Z2G1 175 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 TGIF2LYQ8IUE0 185 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 SIAH3Q8IW03 269 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR8I2Q8N0Y5 310 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 SMIM20Q8N5G0 67 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 BMPERQ8N8U9 685 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 FER1L6-AS1Q8NA97 138 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 NOXO1Q8NFA2 376 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR5A1Q8NGJ0 315 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR1N2Q8NGR9 330 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR13G1Q8NGZ3 307 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR52P1PQ8NH57 321 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 HMGCLL1Q8TB92 370 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 VN1R17PQ8TDU5 208 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 GPR119Q8TDV5 335 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 ZNF418Q8TF45 676 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 THEM6Q8WUY1 208 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 SMIM4Q8WVI0 70 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 RXFP2Q8WXD0 754 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 RAB8BQ92930 207 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 MS4A6EQ96DS6 147 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 SEH1LQ96EE3 360 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 GRAMD2BQ96HH9 432 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 ZFP3Q96NJ6 502 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 ASCL2Q99929 193 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms