RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 TNFAIP8L1Q8WVP5 186 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 IMP4Q96G21 291 aaKnown RBP3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 OLFM3Q96PB7 478 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 TIPINQ9BVW5 301 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 ZNF436Q9C0F3 470 aaPredicted RBP3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 OR51I1Q9H343 314 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 NEU3Q9UQ49 428 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 POMPQ9Y244 141 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 POLR1DQ9Y2S0 133 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 YTHDF2Q9Y5A9 579 aaKnown RBP3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 CACNG2Q9Y698 323 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 GPATCH8Q9UKJ3 1502 aaKnown RBP3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 SIGLEC1Q9BZZ2 1709 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 NOS1P29475 1434 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 ABCA7Q8IZY2 2146 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 TGIF2-C20orf24A0A0A6YYL0 155 aa3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 TMEM238C9JI98 176 aa3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 M0QYV0 167 aa3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 LY6G6DO95868 133 aa3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 IGLV3-25P01717 112 aa3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 ATP5G1P05496 136 aa3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 IL3P08700 152 aa3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 MT3P25713 68 aa3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 NAA20P61599 178 aa3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 GUK1Q16774 197 aa3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 FAM78AQ5JUQ0 283 aa3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 TEX30Q5JUR7 227 aa3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 MORN3Q6PF18 240 aaPredicted RBP3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 Q6ZRU5 148 aa3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 Q6ZTC4 211 aa3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 OLIG3Q7RTU3 272 aa3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 NEGR1Q7Z3B1 354 aa3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 CIRBP-AS1Q8TBR5 109 aa3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 EEF1AKMT1Q8WVE0 214 aa3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 YPEL4Q96NS1 127 aa3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 EBNA1BP2Q99848 306 aaKnown RBP3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 VPS29Q9UBQ0 182 aa3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 DKKL1Q9UK85 242 aa3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 ZNF706Q9Y5V0 76 aaPredicted RBP3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 ZNF780BQ9Y6R6 833 aa3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 NCAPD3P42695 1498 aa3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 TCF20Q9UGU0 1960 aaKnown RBP3.51□□□□□ -1.85
TM9SF3-202ENST00000443638 WI2-2373I1.2A0A1W2PRP0 233 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 SMIM9A6NGZ8 99 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 CLDN24A6NM45 220 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 C11orf94C9JXX5 98 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 E5RI56 91 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 ZNF861PO60384 105 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 PLIN3O60664 434 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 SERPINA1P01009 418 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 IL6P05231 212 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 REG1AP05451 166 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 SOD3P08294 240 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 ZNF688P0C7X2 276 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 NELFEP18615 380 aaKnown RBP3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 CCR7P32248 378 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 CBX5P45973 191 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 RPS10P46783 165 aaKnown RBP3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 SULT1A1P50225 295 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 SULT1A2P50226 295 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 CMC4P56277 68 aaPredicted RBP3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 MP68P56378 58 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 RAB25P57735 213 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 ARPC4P59998 168 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 RAB5BP61020 215 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 DAD1P61803 113 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 POLR2GP62487 172 aaKnown RBP eCLIP3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 ELOCQ15369 112 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 ZNF239Q16600 458 aaKnown RBP3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 MESTQ5EB52 335 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 ZNF684Q5T5D7 378 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 RSBN1Q5VWQ0 802 aaPredicted RBP3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 TMEM215Q68D42 235 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 RASSF6Q6ZTQ3 369 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 MARCH3Q86UD3 253 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 TMEM86BQ8N661 226 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 CLDN22Q8N7P3 220 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 ARIH2OSQ8N7S6 290 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 OR2M3Q8NG83 312 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 SPPL2BQ8TCT7 592 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 TMBIM1Q969X1 311 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 PDXPQ96GD0 296 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 NARS2Q96I59 477 aaKnown RBP3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 ZSCAN16Q9H4T2 348 aaPredicted RBP3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 NYAP2Q9P242 653 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 HECW2Q9P2P5 1572 aa3.5□□□□□ -1.85
TM9SF3-202ENST00000443638 MRC2Q9UBG0 1479 aa3.49□□□□□ -1.85
TM9SF3-202ENST00000443638 A0A1B0GUA9 196 aa3.49□□□□□ -1.85
TM9SF3-202ENST00000443638 PANO1I0J062 215 aa3.49□□□□□ -1.85
TM9SF3-202ENST00000443638 HAND1O96004 215 aa3.49□□□□□ -1.85
TM9SF3-202ENST00000443638 ZNF823P16415 610 aa3.49□□□□□ -1.85
TM9SF3-202ENST00000443638 SLC6A1P30531 599 aa3.49□□□□□ -1.85
TM9SF3-202ENST00000443638 REG1BP48304 166 aa3.49□□□□□ -1.85
TM9SF3-202ENST00000443638 HSPA13P48723 471 aa3.49□□□□□ -1.85
TM9SF3-202ENST00000443638 ELF3P78545 371 aaPredicted RBP3.49□□□□□ -1.85
TM9SF3-202ENST00000443638 NXNL2Q5VZ03 156 aa3.49□□□□□ -1.85
TM9SF3-202ENST00000443638 OR10K2Q6IF99 312 aa3.49□□□□□ -1.85
TM9SF3-202ENST00000443638 SCGB1D4Q6XE38 83 aa3.49□□□□□ -1.85
TM9SF3-202ENST00000443638 CCDC121Q6ZUS5 278 aa3.49□□□□□ -1.85
TM9SF3-202ENST00000443638 WDR86Q86TI4 376 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms