RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 PPP1R1CQ8WVI7 109 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 FUCA1P04066 466 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 SLC25A1P53007 311 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 SCAND1P57086 179 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 SLC38A11Q08AI6 406 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 GPNMBQ14956 572 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 NHLRC1Q6VVB1 395 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 FAM219AQ8IW50 185 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 PATE1Q8WXA2 126 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 IGKV3-20P01619 116 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 FABP5Q01469 135 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 SNAI3Q3KNW1 292 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 RAB40CQ96S21 281 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 ZFP30Q9Y2G7 519 aa10.72□□□□□ -0.69
PCF11-201ENST00000298281 LIMK1P53667 647 aa10.71□□□□□ -0.69
PCF11-201ENST00000298281 LINC01465Q8N7H1 131 aa10.71□□□□□ -0.69
PCF11-201ENST00000298281 CADM4Q8NFZ8 388 aa10.71□□□□□ -0.69
PCF11-201ENST00000298281 GPR35Q9HC97 309 aa10.71□□□□□ -0.69
PCF11-201ENST00000298281 BCL2L11O43521 198 aa10.71□□□□□ -0.69
PCF11-201ENST00000298281 PSMG3Q9BT73 122 aaPredicted RBP10.71□□□□□ -0.69
PCF11-201ENST00000298281 CXXC4Q9H2H0 198 aa10.71□□□□□ -0.69
PCF11-201ENST00000298281 MMP24Q9Y5R2 645 aa10.71□□□□□ -0.69
PCF11-201ENST00000298281 DIRC3C9JPN6 131 aa10.71□□□□□ -0.69
PCF11-201ENST00000298281 RELQ04864 619 aaPredicted RBP10.71□□□□□ -0.69
PCF11-201ENST00000298281 OTPQ5XKR4 325 aa10.71□□□□□ -0.69
PCF11-201ENST00000298281 CADM3Q8N126 398 aa10.71□□□□□ -0.69
PCF11-201ENST00000298281 OR8G5Q8NG78 346 aa10.71□□□□□ -0.69
PCF11-201ENST00000298281 NEU1Q99519 415 aa10.71□□□□□ -0.69
PCF11-201ENST00000298281 RHNO1Q9BSD3 238 aa10.71□□□□□ -0.69
PCF11-201ENST00000298281 SLC25A37Q9NYZ2 338 aa10.71□□□□□ -0.69
PCF11-201ENST00000298281 MAST2Q6P0Q8 1798 aa10.71□□□□□ -0.69
PCF11-201ENST00000298281 METTL12A8MUP2 240 aa10.71□□□□□ -0.7
PCF11-201ENST00000298281 PTOV1Q86YD1 416 aa10.71□□□□□ -0.7
PCF11-201ENST00000298281 ADTRPQ96IZ2 230 aa10.71□□□□□ -0.7
PCF11-201ENST00000298281 OR52M1Q8NGK5 317 aa10.71□□□□□ -0.7
PCF11-201ENST00000298281 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.71□□□□□ -0.73e-6■■■■□ 23.1
PCF11-201ENST00000298281 SP6Q3SY56 376 aa10.71□□□□□ -0.7
PCF11-201ENST00000298281 TEX29Q8N6K0 151 aa10.71□□□□□ -0.7
PCF11-201ENST00000298281 OR52B4Q8NGK2 314 aa10.71□□□□□ -0.7
PCF11-201ENST00000298281 OTOSQ8NHW6 89 aa10.71□□□□□ -0.7
PCF11-201ENST00000298281 C2orf88Q9BSF0 95 aa10.71□□□□□ -0.7
PCF11-201ENST00000298281 SPTBN2O15020 2390 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 CEACAM5P06731 702 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 TDGF1P13385 188 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 DNASE2BQ8WZ79 361 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 RAX2Q96IS3 184 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 PRELID3AQ96N28 172 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 TMEM38BQ9NVV0 291 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 ISLRO14498 428 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 FABP2P12104 132 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 RSPO2Q6UXX9 243 aaPredicted RBP10.7□□□□□ -0.7
PCF11-201ENST00000298281 ERRFI1Q9UJM3 462 aaPredicted RBP10.7□□□□□ -0.7
PCF11-201ENST00000298281 CCL21O00585 134 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 APCSP02743 223 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 LPAR6P43657 344 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 RPS4Y2Q8TD47 263 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 COL25A1Q9BXS0 654 aaPredicted RBP10.7□□□□□ -0.7
PCF11-201ENST00000298281 SPTY2D1-AS1A0A0U1RR47 76 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 PSG5Q15238 335 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 FAAP20Q6NZ36 180 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 ZBTB44Q8NCP5 570 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 MRGPRDQ8TDS7 321 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 MCM3APO60318 1980 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 FOXF1Q12946 379 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 ANKRD55Q3KP44 614 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 KIRREL2Q6UWL6 708 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 BHLHA15Q7RTS1 189 aaPredicted RBP10.7□□□□□ -0.7
PCF11-201ENST00000298281 SFTPCP11686 197 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 MYOGP15173 224 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 ZNF56Q15929 161 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 TMEM78Q5T7P6 136 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 ORAI1Q96D31 301 aa10.7□□□□□ -0.7
PCF11-201ENST00000298281 B4GALT3O60512 393 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 SMPD2O60906 423 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 PSG6Q00889 435 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 ZNF383Q8NA42 475 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 PAM16Q9Y3D7 125 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 IGHA1P01876 353 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 IGHA2P01877 340 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 HLA-DRB5Q30154 266 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 OR2T10Q8NGZ9 312 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 MED12Q93074 2177 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 LRRC29Q8WV35 223 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 A0A0A6YYD5 115 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 FCGR3AP08637 254 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 FAM74A4Q5TZK3 123 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 SLC25A42Q86VD7 318 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 OR4X1Q8NH49 305 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 TMEM167BQ9NRX6 74 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 PITPNC1Q9UKF7 332 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 ZDHHC8Q9ULC8 765 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 WNK2Q9Y3S1 2297 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 WNT1P04628 370 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 JMJD6Q6NYC1 403 aaPredicted RBP10.69□□□□□ -0.7
PCF11-201ENST00000298281 Q6ZNB5 142 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 ZNF680Q8NEM1 530 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 CACNA1BQ00975 2339 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 CXCL10P02778 98 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 CD96P40200 585 aa10.69□□□□□ -0.7
PCF11-201ENST00000298281 GFERP55789 205 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms