RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 MsmpB1AWI6 139 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Rnaset2aC0HKG5 259 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Rnaset2bC0HKG6 259 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Vmn1r68E9Q0V3 319 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr715bE9Q725 315 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr152G3X9L8 316 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Kcns1O35173 497 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Wsb1O54927 421 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 GbaP17439 515 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Stfa1P35175 97 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 ElnP54320 860 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Rab3cP62823 227 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Fabp5Q05816 135 aaKnown RBP5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 H2-DMb2Q31099 261 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Il12rb1Q60837 738 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Glra1Q64018 457 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 SprQ64105 261 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 AgaQ64191 346 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr1283Q7TQY4 305 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr714Q7TRN0 317 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr314Q7TRZ7 330 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Q80W69 301 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 CblcQ80XL1 496 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Zfp955aQ80XR7 545 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Plppr1Q8BFZ2 325 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Actrt3Q8BXF8 369 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Nhlrc3Q8CCH2 347 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Esco2Q8CIB9 592 aaKnown RBP5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Cbr3Q8K354 277 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Vmn1r231Q8R2A3 311 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr1277Q8VF41 303 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Ear6Q923L7 155 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Letmd1Q924L1 360 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Rnf2Q9CQJ4 336 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Tmem138Q9D6G5 162 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Bola1Q9D8S9 137 aaKnown RBP5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Trp53tg5Q9D976 238 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Gab1Q9QYY0 695 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Anxa10Q9QZ10 324 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Mnx1Q9QZW9 404 aa5.55□□□□□ -1.52
Lig4-202ENSMUST00000170033 Tcrg-C4A0A075B6C7 190 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Gm4131A0A140LJ24 318 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Vmn1r138D3YTY2 306 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 4930444P10RikD3YUR1 185 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Gm8693E9PW18 306 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Vmn1r174E9PYW5 313 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Vmn2r76E9Q3F5 853 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Gm4498K9J7G4 306 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Vmn2r28L7N203 852 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Vmn1r118L7N273 306 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Irs3O54718 495 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Tcstv3O70518 169 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Ccl5P30882 91 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Snai2P97469 269 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Hspb6Q5EBG6 162 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Fbxw22Q5XG67 466 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Ptpmt1Q66GT5 193 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Znf629Q6A085 867 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Hsh2dQ6VYH9 334 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr1135Q7TR42 310 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr1058Q7TR74 316 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Fam110dQ80X91 271 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Slc25a44Q8BGF9 314 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Ino80cQ8BHA0 191 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Harbi1Q8BR93 349 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Arrb1Q8BWG8 418 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Xkr8Q8C0T0 401 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Krt33aQ8K0Y2 404 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Vmn1r37Q8R2E4 302 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Seh1lQ8R2U0 360 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr1491Q8VEZ5 319 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr402Q8VFX8 315 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr51Q8VGG9 307 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Q9CQT6 229 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Mrps28Q9CY16 186 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Ankrd22Q9D3J5 191 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Fam122cQ9D5J5 180 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 ShpkQ9D5J6 476 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Q9D727 114 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Med8Q9D7W5 268 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Cmtm2bQ9DAC0 210 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Rnf32Q9JIT1 368 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Slco1b2Q9JJL3 689 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Reep6Q9JM62 201 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Mbd2Q9Z2E1 414 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Cabin1G3X8Q1 2187 aaKnown RBP5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Myo7aP97479 2215 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr115B2RTB9 312 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr243E9PV96 316 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr432E9Q8M2 312 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Gm21767J3QPV5 180 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr628K7N6B2 316 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Prrt1O35449 306 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 AdaP03958 352 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Cxcl10P17515 98 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Mmp9P41245 730 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Hcrtr2P58308 460 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Ppp1caP62137 330 aaKnown RBP5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Olfr1136Q0VBI4 310 aa5.54□□□□□ -1.52
Lig4-202ENSMUST00000170033 Cd96Q3U0X8 602 aa5.54□□□□□ -1.52
Retrieved 100 of 22,080 RNA–protein pairs in 66.5 ms