RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Dtd1Q9DD18 209 aaKnown RBP11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Npas3Q9QZQ0 925 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Lama1P19137 3084 aa11.83□□□□□ -0.52
Nup88-201ENSMUST00000035283 Gm14403A2BFU4 402 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Tns1E9Q0S6 1888 aaKnown RBP11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Vmn1r173E9Q8V7 313 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Cbfa2t3O54972 620 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 C1ql1O88992 258 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Atp4bP50992 294 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Vmn1r236Q05A06 334 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Zic4Q61467 341 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Kyat3Q71RI9 455 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Q80X32 188 aaKnown RBP11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Q8BN57 294 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Fam234bQ8BYI8 624 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Pias2Q8C5D8 621 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Nhlrc3Q8CCH2 347 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Iglon5Q8HW98 336 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Depp1Q8K2F3 205 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 MepeQ8K4L6 441 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr497Q8VG08 314 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 CytipQ91VY6 359 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Gdpd3Q99LY2 330 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 MynnQ99MD8 610 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Fbxo36Q9CQ24 188 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Zmat5Q9CQR5 170 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Gins3Q9CY94 216 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Arr3Q9EQP6 381 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Trbv15A0A0A6YYE3 115 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 E030025P04RikA2A6V5 185 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Slc18b1D3Z5L6 459 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Rnf148G3X9R7 316 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Obox6G3X9U1 347 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Gpr27O54897 379 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Saa2P05367 122 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Znf271P15620 580 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 RidaP52760 135 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Il18P70380 192 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Actbl2Q8BFZ3 376 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Actrt3Q8BXF8 369 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Parp11Q8CFF0 331 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Lrrc10Q8K3W2 274 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 SccpdhQ8R127 429 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Phospho1Q8R2H9 267 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr1099Q8VG37 312 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr50Q8VGK5 312 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Mrpl18Q9CQL5 180 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Arrdc2Q9D668 407 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Rcl1Q9JJT0 373 aaKnown RBP11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Fbxw4Q9JMJ2 410 aa11.82□□□□□ -0.52
Nup88-201ENSMUST00000035283 Lrp4Q8VI56 1905 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr31E9Q3K2 317 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr554E9Q546 317 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Fbxw25F7C9P2 466 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Gm11009F7CWA7 138 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 CrygsO35486 178 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Syt3O35681 587 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Wnt1P04426 370 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Irf2P23906 349 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Oprm1P42866 398 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Mfap2P55002 183 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Cldn18P56857 264 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr125Q14AJ9 320 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Fbxo22Q78JE5 402 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Arl14epQ8BIX3 276 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Plekha1Q8BUL6 383 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Mcts1Q9DB27 181 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr632Q9EPN9 317 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Nkx2-4Q9EQM3 354 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Prr19B2RW88 366 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 CymB7ZWD6 379 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 VtnP29788 478 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Zfp772Q3UQL6 416 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 MybphlQ5FW53 355 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Sema6dQ76KF0 1073 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 A930004D18RikQ8C8W7 157 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Slc38a2Q8CFE6 504 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Tmem267Q8VDR5 215 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Znf281Q99LI5 893 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 PecrQ99MZ7 303 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 PinlypQ9CQD7 212 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Rcc1lQ9CYF5 461 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Emc9Q9DB76 206 aa11.81□□□□□ -0.52
Nup88-201ENSMUST00000035283 Ccdc74aE9Q9U8 364 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr66F8VQ01 311 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Gm21783J3QM57 227 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Gm20834J3QM72 227 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Trav13d-3J3QMG8 112 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Igh-VJ558P01758 117 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Zfp36l2P23949 484 aaKnown RBP11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Vmn1r223Q5SSA0 361 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 AdoQ6PDY2 256 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 NaxeQ8K4Z3 282 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Gins1Q9CZ15 196 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Asb5Q9D1A4 329 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Nol3Q9D1X0 220 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Dnajc4Q9D844 244 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 1700025F22RikQ9D9Y7 111 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 PacrgQ9DAK2 241 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Tnfrsf19Q9JLL3 416 aa11.8□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 51.1 ms