Protein–RNA interactions for Protein: O54972

Cbfa2t3, Protein CBFA2T3, mousemouse

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbfa2t3O54972 Gm25239-201ENSMUST00000174915 86 ntBASIC39.72■■■■□ 3.95
Cbfa2t3O54972 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.97■■■■□ 3.51
Cbfa2t3O54972 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
Cbfa2t3O54972 Gm24109-201ENSMUST00000175489 103 ntBASIC34.68■■■■□ 3.14
Cbfa2t3O54972 Gm15042-201ENSMUST00000120212 883 ntBASIC34.21■■■■□ 3.07
Cbfa2t3O54972 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.58■■■□□ 2.97
Cbfa2t3O54972 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
Cbfa2t3O54972 Gm15045-201ENSMUST00000117359 883 ntBASIC33.4■■■□□ 2.94
Cbfa2t3O54972 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
Cbfa2t3O54972 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Cbfa2t3O54972 Gm23366-201ENSMUST00000175022 89 ntBASIC33.09■■■□□ 2.89
Cbfa2t3O54972 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.51■■■□□ 2.79
Cbfa2t3O54972 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.2■■■□□ 2.75
Cbfa2t3O54972 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.18■■■□□ 2.74
Cbfa2t3O54972 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Cbfa2t3O54972 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Cbfa2t3O54972 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Cbfa2t3O54972 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
Cbfa2t3O54972 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Cbfa2t3O54972 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Cbfa2t3O54972 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.53■■■□□ 2.64
Cbfa2t3O54972 Gm25238-201ENSMUST00000174914 89 ntBASIC31.53■■■□□ 2.64
Cbfa2t3O54972 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Cbfa2t3O54972 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Cbfa2t3O54972 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Cbfa2t3O54972 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.88■■■□□ 2.53
Cbfa2t3O54972 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Cbfa2t3O54972 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Cbfa2t3O54972 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
Cbfa2t3O54972 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Cbfa2t3O54972 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.46■■■□□ 2.47
Cbfa2t3O54972 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.45■■■□□ 2.47
Cbfa2t3O54972 Gm25262-201ENSMUST00000174934 133 ntBASIC30.41■■■□□ 2.46
Cbfa2t3O54972 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.4■■■□□ 2.46
Cbfa2t3O54972 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
Cbfa2t3O54972 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
Cbfa2t3O54972 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Cbfa2t3O54972 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Cbfa2t3O54972 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Cbfa2t3O54972 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.06■■■□□ 2.4
Cbfa2t3O54972 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.04■■■□□ 2.4
Cbfa2t3O54972 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.04■■■□□ 2.4
Cbfa2t3O54972 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.92■■■□□ 2.38
Cbfa2t3O54972 Gm27325-201ENSMUST00000175467 74 ntBASIC29.9■■■□□ 2.38
Cbfa2t3O54972 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
Cbfa2t3O54972 Gm26115-201ENSMUST00000175605 87 ntBASIC29.86■■■□□ 2.37
Cbfa2t3O54972 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Cbfa2t3O54972 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.81■■■□□ 2.36
Cbfa2t3O54972 Rab21-202ENSMUST00000218831 843 ntBASIC29.68■■■□□ 2.34
Cbfa2t3O54972 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Cbfa2t3O54972 Gm8109-201ENSMUST00000194076 746 ntBASIC29.65■■■□□ 2.34
Cbfa2t3O54972 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.65■■■□□ 2.34
Cbfa2t3O54972 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Cbfa2t3O54972 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Cbfa2t3O54972 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Cbfa2t3O54972 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Cbfa2t3O54972 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Cbfa2t3O54972 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Cbfa2t3O54972 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.33■■■□□ 2.29
Cbfa2t3O54972 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Cbfa2t3O54972 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
Cbfa2t3O54972 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Cbfa2t3O54972 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.22■■■□□ 2.27
Cbfa2t3O54972 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.15■■■□□ 2.26
Cbfa2t3O54972 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.09■■■□□ 2.25
Cbfa2t3O54972 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Cbfa2t3O54972 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.97■■■□□ 2.23
Cbfa2t3O54972 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Cbfa2t3O54972 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Cbfa2t3O54972 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Cbfa2t3O54972 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.84■■■□□ 2.21
Cbfa2t3O54972 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Cbfa2t3O54972 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Cbfa2t3O54972 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.78■■■□□ 2.2
Cbfa2t3O54972 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Cbfa2t3O54972 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Cbfa2t3O54972 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Cbfa2t3O54972 Gm24804-201ENSMUST00000174982 85 ntBASIC28.67■■■□□ 2.18
Cbfa2t3O54972 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Cbfa2t3O54972 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.66■■■□□ 2.18
Cbfa2t3O54972 Psd-208ENSMUST00000224556 2034 ntBASIC28.59■■■□□ 2.17
Cbfa2t3O54972 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.54■■■□□ 2.16
Cbfa2t3O54972 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.51■■■□□ 2.15
Cbfa2t3O54972 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.46■■■□□ 2.15
Cbfa2t3O54972 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
Cbfa2t3O54972 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Cbfa2t3O54972 Gm27322-201ENSMUST00000184007 104 ntBASIC28.4■■■□□ 2.14
Cbfa2t3O54972 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.39■■■□□ 2.14
Cbfa2t3O54972 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.36■■■□□ 2.13
Cbfa2t3O54972 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
Cbfa2t3O54972 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.34■■■□□ 2.13
Cbfa2t3O54972 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.28■■■□□ 2.12
Cbfa2t3O54972 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
Cbfa2t3O54972 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Cbfa2t3O54972 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Cbfa2t3O54972 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Cbfa2t3O54972 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Cbfa2t3O54972 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.2■■■□□ 2.1
Cbfa2t3O54972 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Cbfa2t3O54972 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms