RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 C1QTNF5Q9BXJ0 243 aa10.14□□□□□ -0.79
C11orf54-215ENST00000617482 TMEM222Q9H0R3 208 aa10.14□□□□□ -0.79
C11orf54-215ENST00000617482 RNF122Q9H9V4 155 aa10.14□□□□□ -0.79
C11orf54-215ENST00000617482 TCFL5Q9UL49 500 aa10.14□□□□□ -0.79
C11orf54-215ENST00000617482 IGSF23A1L1A6 192 aa10.14□□□□□ -0.79
C11orf54-215ENST00000617482 C5orf49A4QMS7 147 aa10.14□□□□□ -0.79
C11orf54-215ENST00000617482 C1orf196B1AJZ1 125 aa10.14□□□□□ -0.79
C11orf54-215ENST00000617482 RPL36A-HNRNPH2H7BZ11 118 aa10.14□□□□□ -0.79
C11orf54-215ENST00000617482 HSD17B6O14756 317 aa10.14□□□□□ -0.79
C11orf54-215ENST00000617482 SSSCA1O60232 199 aa10.14□□□□□ -0.79
C11orf54-215ENST00000617482 CYTIPO60759 359 aa10.14□□□□□ -0.79
C11orf54-215ENST00000617482 EIF3GO75821 320 aaKnown RBP eCLIP10.14□□□□□ -0.79
C11orf54-215ENST00000617482 HLA-HP01893 362 aa10.14□□□□□ -0.79
C11orf54-215ENST00000617482 NKX2-1P43699 371 aaPredicted RBP10.14□□□□□ -0.79
C11orf54-215ENST00000617482 CYB561P49447 251 aa10.14□□□□□ -0.79
C11orf54-215ENST00000617482 ARF1P84077 181 aaKnown RBP10.14□□□□□ -0.79
C11orf54-215ENST00000617482 TSC22D1Q15714 1073 aa10.14□□□□□ -0.79
C11orf54-215ENST00000617482 ZFP62Q8NB50 900 aaPredicted RBP10.14□□□□□ -0.79
C11orf54-215ENST00000617482 NEK7Q8TDX7 302 aa10.14□□□□□ -0.79
C11orf54-215ENST00000617482 SPSB4Q96A44 273 aa10.14□□□□□ -0.79
C11orf54-215ENST00000617482 FGF23Q9GZV9 251 aaPredicted RBP10.14□□□□□ -0.79
C11orf54-215ENST00000617482 SMOC1Q9H4F8 434 aa10.14□□□□□ -0.79
C11orf54-215ENST00000617482 KCNJ16Q9NPI9 418 aa10.14□□□□□ -0.79
C11orf54-215ENST00000617482 KIAA1549Q9HCM3 1950 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 IGKV1D-13A0A0B4J2D9 117 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 CDRT15L2A8MXV6 281 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 C3orf80F5H4A9 247 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 ADAM20O43506 726 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 CST7O76096 145 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 TK1P04183 234 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 IGKV1-13P0DP09 117 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 FOLR2P14207 255 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 RAB5CP51148 216 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 FOXG1P55316 489 aaPredicted RBP10.13□□□□□ -0.79
C11orf54-215ENST00000617482 CCL20P78556 96 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 PRDX4Q13162 271 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 FAM24BQ8N5W8 94 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 TMEM217Q8N7C4 229 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 OR2G3Q8NGZ4 309 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 CPNE4Q96A23 557 aaPredicted RBP10.13□□□□□ -0.79
C11orf54-215ENST00000617482 EGLN1Q9GZT9 426 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 SLC35B3Q9H1N7 401 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 STRAPQ9Y3F4 350 aaKnown RBP10.13□□□□□ -0.79
C11orf54-215ENST00000617482 hCG_1809904A0A1W2PP81 198 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 A0A1W2PPE3 182 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 A0A1W2PR64 198 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 A0A1W2PRV1 198 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 ZNF724A8MTY0 619 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 TNFSF12O43508 249 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 MT-ND4LP03901 98 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 DUSP3P51452 185 aaPredicted RBP10.13□□□□□ -0.79
C11orf54-215ENST00000617482 GFRA1P56159 465 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 SELENOHQ8IZQ5 122 aaKnown RBP10.13□□□□□ -0.79
C11orf54-215ENST00000617482 TMEM171Q8WVE6 324 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 TECTBQ96PL2 329 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 PRRG4Q9BZD6 226 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 PRDM14Q9GZV8 571 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 CALHM2Q9HA72 323 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 Q9N2K0 584 aa10.13□□□□□ -0.79
C11orf54-215ENST00000617482 PROB1E7EW31 1015 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 K7N7A8 449 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 CDS2O95674 445 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 CELA3AP09093 270 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 PAX6P26367 422 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 ATP6V0CP27449 155 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 HERPUD1Q15011 391 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 LPAL2Q16609 132 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 EIF2S3LQ2VIR3 472 aaKnown RBP10.12□□□□□ -0.79
C11orf54-215ENST00000617482 TRIM61Q5EBN2 209 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 PBDC1Q9BVG4 233 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 CCL28Q9NRJ3 127 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 FAM86C1Q9NVL1 165 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 MTCH1Q9NZJ7 389 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 PUS1Q9Y606 427 aaKnown RBP eCLIP10.12□□□□□ -0.79
C11orf54-215ENST00000617482 ZNF503-AS2A6NEH8 195 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 SLC22A20A6NK97 555 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 ZNF732B4DXR9 585 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 NGFP01138 241 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 IFNA4P05014 189 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 ACAA1P09110 424 aaPredicted RBP10.12□□□□□ -0.79
C11orf54-215ENST00000617482 CEBPGP53567 150 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 FOXO1Q12778 655 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 DCAF12Q5T6F0 453 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 RBMS3Q6XE24 437 aaKnown RBP10.12□□□□□ -0.79
C11orf54-215ENST00000617482 COLCA1Q6ZS62 124 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 TIPARPQ7Z3E1 657 aaKnown RBP10.12□□□□□ -0.79
C11orf54-215ENST00000617482 WDR5BQ86VZ2 330 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 TUSC5Q8IXB3 177 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 TMEM252Q8N6L7 170 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 OR5C1Q8NGR4 320 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 TMEM56Q96MV1 263 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 ZPBPQ9BS86 351 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 C11orf1Q9H5F2 150 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 LRFN1Q9P244 771 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 TMEM56-RWDD3S4R434 201 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 FREM1Q5H8C1 2179 aa10.12□□□□□ -0.79
C11orf54-215ENST00000617482 A0A1W2PPE2 198 aa10.11□□□□□ -0.79
C11orf54-215ENST00000617482 TMEM50AO95807 157 aa10.11□□□□□ -0.79
C11orf54-215ENST00000617482 ZNF14P17017 642 aaPredicted RBP10.11□□□□□ -0.79
C11orf54-215ENST00000617482 LMO1P25800 156 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms