RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 ANKRD37Q7Z713 158 aa12.82□□□□□ -0.36
VPS36-207ENST00000611132 BIVMQ86UB2 503 aa12.82□□□□□ -0.36
VPS36-207ENST00000611132 KCNE4Q8WWG9 221 aa12.82□□□□□ -0.36
VPS36-207ENST00000611132 GNRHR2Q96P88 292 aa12.82□□□□□ -0.36
VPS36-207ENST00000611132 SOX7Q9BT81 388 aa12.82□□□□□ -0.36
VPS36-207ENST00000611132 CCL28Q9NRJ3 127 aa12.82□□□□□ -0.36
VPS36-207ENST00000611132 A0A1B0GV90 55 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 NDUFA2O43678 99 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 IGHEP01854 428 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 LRRC75AQ8NAA5 344 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 FAM117AQ9C073 453 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 SLC7A10Q9NS82 523 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 M0QZK8 103 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 GGCTO75223 188 aaKnown RBP12.81□□□□□ -0.36
VPS36-207ENST00000611132 ZNF17P17021 662 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 CYB561P49447 251 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 ZNF816Q0VGE8 651 aaPredicted RBP12.81□□□□□ -0.36
VPS36-207ENST00000611132 FOXO1Q12778 655 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 SLC10A1Q14973 349 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 REC114Q7Z4M0 266 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 KDF1Q8NAX2 398 aaPredicted RBP12.81□□□□□ -0.36
VPS36-207ENST00000611132 COA4Q9NYJ1 87 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 H0YIZ8 118 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 UBE2CO00762 179 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 DVL1O14640 695 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 TSPAN2O60636 221 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 HNRNPA3P51991 378 aaKnown RBP12.81□□□□□ -0.36
VPS36-207ENST00000611132 FZD5Q13467 585 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 OR8G1Q15617 311 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 OR10V1Q8NGI7 309 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 UBALD1Q8TB05 177 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 ESRP2Q9H6T0 727 aaKnown RBP12.81□□□□□ -0.36
VPS36-207ENST00000611132 GPR27Q9NS67 375 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 PATE4P0C8F1 98 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 PGA4P0DJD7 388 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 PGA5P0DJD9 388 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 CXCL12P48061 93 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 GABRA4P48169 554 aa12.81□□□□□ -0.36
VPS36-207ENST00000611132 RPS16P62249 146 aaKnown RBP12.81□□□□□ -0.36
VPS36-207ENST00000611132 APOBEC3DQ96AK3 386 aaPredicted RBP12.81□□□□□ -0.36
VPS36-207ENST00000611132 IGHV1OR21-1A0A087WYE8 117 aa12.8□□□□□ -0.36
VPS36-207ENST00000611132 MDH2P40926 338 aaKnown RBP12.8□□□□□ -0.36
VPS36-207ENST00000611132 CMTM2Q8TAZ6 248 aa12.8□□□□□ -0.36
VPS36-207ENST00000611132 LANCL2Q9NS86 450 aa12.8□□□□□ -0.36
VPS36-207ENST00000611132 IGHV3-64DA0A0J9YX35 117 aa12.8□□□□□ -0.36
VPS36-207ENST00000611132 ARR3P36575 388 aa12.8□□□□□ -0.36
VPS36-207ENST00000611132 EDDM3AQ14507 147 aa12.8□□□□□ -0.36
VPS36-207ENST00000611132 NUFIP2Q7Z417 695 aaKnown RBP12.8□□□□□ -0.36
VPS36-207ENST00000611132 KNTC1P50748 2209 aa12.8□□□□□ -0.36
VPS36-207ENST00000611132 PTPRDP23468 1912 aa12.8□□□□□ -0.36
VPS36-207ENST00000611132 TRGC1P0CF51 173 aa12.8□□□□□ -0.36
VPS36-207ENST00000611132 IGFBP3P17936 291 aaPredicted RBP12.8□□□□□ -0.36
VPS36-207ENST00000611132 MST1P26927 711 aa12.8□□□□□ -0.36
VPS36-207ENST00000611132 CDC34P49427 236 aaPredicted RBP12.8□□□□□ -0.36
VPS36-207ENST00000611132 MANBALQ9NQG1 85 aa12.8□□□□□ -0.36
VPS36-207ENST00000611132 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.8□□□□□ -0.36
VPS36-207ENST00000611132 A0A0U1RQV5 110 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 COLCA2A8K830 154 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 MS4A18H0YCH9 400 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 LINC01565O15544 149 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 MYF5P13349 255 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 PRDX4Q13162 271 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 ATP6V1FQ16864 119 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 MS4A18Q3C1V0 323 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 RP1L1Q8IWN7 2480 aaPredicted RBP12.79□□□□□ -0.36
VPS36-207ENST00000611132 IRF2P14316 349 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 HOXA5P20719 270 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 ARG2P78540 354 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 GAMTQ14353 236 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 TBC1D28Q2M2D7 210 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 PLAC9Q5JTB6 97 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 MOB1BQ7L9L4 216 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 TIMP4Q99727 224 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 TMEM147Q9BVK8 224 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 RSPO3Q9BXY4 272 aaPredicted RBP12.79□□□□□ -0.36
VPS36-207ENST00000611132 LYRM2Q9NU23 88 aaPredicted RBP12.79□□□□□ -0.36
VPS36-207ENST00000611132 DHRS7CA6NNS2 312 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 VSTM5A8MXK1 200 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 CTSBP07858 339 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 MMP9P14780 707 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 FAM3BP58499 235 aaPredicted RBP12.79□□□□□ -0.36
VPS36-207ENST00000611132 ERVFC1-1P60608 527 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 ZNF343Q6P1L6 599 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 OR52M1Q8NGK5 317 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 OR2V1Q8NHB1 315 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 LHFPL6Q9Y693 200 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 TIMM8AO60220 97 aaPredicted RBP12.79□□□□□ -0.36
VPS36-207ENST00000611132 OR10J1P30954 320 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 GNG3P63215 75 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 IGLV3-21P80748 117 aaPredicted RBP12.79□□□□□ -0.36
VPS36-207ENST00000611132 VAMP3Q15836 100 aa12.79□□□□□ -0.36
VPS36-207ENST00000611132 PTCRAQ6ISU1 281 aaPredicted RBP12.79□□□□□ -0.36
VPS36-207ENST00000611132 MRPL30Q8TCC3 161 aaKnown RBP12.79□□□□□ -0.36
VPS36-207ENST00000611132 C5orf52A6NGY3 159 aa12.78□□□□□ -0.36
VPS36-207ENST00000611132 GLIPR1P48060 266 aa12.78□□□□□ -0.36
VPS36-207ENST00000611132 C16orf82Q7Z2V1 217 aa12.78□□□□□ -0.36
VPS36-207ENST00000611132 CARFQ8N187 725 aa12.78□□□□□ -0.36
VPS36-207ENST00000611132 VPS25Q9BRG1 176 aa12.78□□□□□ -0.36
VPS36-207ENST00000611132 ZNF665Q9H7R5 613 aa12.78□□□□□ -0.36
VPS36-207ENST00000611132 A0A1B0GU03 582 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms