RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 TMEM238LA0A1B0GVL6 79 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 FAM221AA4D161 298 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 FAM172BPA6NC97 362 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 OOEPA6NGQ2 149 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 PPIAL4DF5H284 164 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 SLC33A1O00400 549 aaPredicted RBP5.22□□□□□ -1.57
LIG3-206ENST00000586058 MGST3O14880 152 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 SPINT2O43291 252 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 SSX4O60224 188 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 SSX5O60225 188 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 PRB1P04280 392 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 HNRNPCP07910 306 aaKnown RBP eCLIP5.22□□□□□ -1.57
LIG3-206ENST00000586058 TRAPPC2P0DI81 140 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 TRAPPC2BP0DI82 140 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 PPIAL4FP0DN26 164 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 OR5H8P0DN80 308 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 ANXA3P12429 323 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 NAT1P18440 290 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 FPR2P25090 351 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 CD80P33681 288 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 UBE2MP61081 183 aaKnown RBP5.22□□□□□ -1.57
LIG3-206ENST00000586058 SEC61A1P61619 476 aaKnown RBP5.22□□□□□ -1.57
LIG3-206ENST00000586058 IL13RA1P78552 427 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 COL10A1Q03692 680 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 EDDM3AQ14507 147 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 PDCD1Q15116 288 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 PLA1AQ53H76 456 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 TMEM255AQ5JRV8 349 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 KRBOX4Q5JUW0 171 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 ZNF826PQ6ZT77 177 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 C22orf34Q6ZV56 151 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 DMRTC2Q8IXT2 367 aaPredicted RBP5.22□□□□□ -1.57
LIG3-206ENST00000586058 ZNF565Q8N9K5 539 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 TMEM185AQ8NFB2 350 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 OR4A4PQ8NGN8 299 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 OR10J5Q8NHC4 309 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 LILRB1Q8NHL6 650 aaPredicted RBP5.22□□□□□ -1.57
LIG3-206ENST00000586058 ZFAND1Q8TCF1 268 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 NEU4Q8WWR8 484 aaPredicted RBP5.22□□□□□ -1.57
LIG3-206ENST00000586058 MAFIPQ8WZ33 124 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 RAB39BQ96DA2 213 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 MED30Q96HR3 178 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 KIRREL1Q96J84 757 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 SNX22Q96L94 193 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 TINAGL1Q9GZM7 467 aaPredicted RBP5.22□□□□□ -1.57
LIG3-206ENST00000586058 TMEM165Q9HC07 324 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 GCM1Q9NP62 436 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 DLL4Q9NR61 685 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 LPAR3Q9UBY5 353 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 ZNF69Q9UC07 566 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 ZNF230Q9UIE0 474 aaPredicted RBP5.22□□□□□ -1.57
LIG3-206ENST00000586058 ELF5Q9UKW6 265 aaPredicted RBP5.22□□□□□ -1.57
LIG3-206ENST00000586058 ANAPC10Q9UM13 185 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 PPIAL4AQ9Y536 164 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 ALG5Q9Y673 324 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 DSCAMO60469 2012 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 MGAQ8IWI9 3026 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 POLEQ07864 2286 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 CACNA1DQ01668 2161 aa5.22□□□□□ -1.57
LIG3-206ENST00000586058 CFAP47Q6ZTR5 3102 aa5.21□□□□□ -1.57
LIG3-206ENST00000586058 MAP1BP46821 2468 aaKnown RBP5.21□□□□□ -1.57
LIG3-206ENST00000586058 ARFGEF3Q5TH69 2177 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 PIEZO2Q9H5I5 2752 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 MEIKINA0A087WXM9 373 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 TRBV6-6A0A0A6YYG2 114 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 A0A1B0GVG6 124 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 A0A1W2PPH5 198 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 RFPL4AA6NLU0 287 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 A6NNC1 897 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 DEFB108AA8MXU0 73 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 TRDCB7Z8K6 153 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 RFPL4AL1F8VTS6 287 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 LGALS8O00214 317 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 WNT9BO14905 357 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 BET1O15155 118 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 FABP7O15540 132 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 NDUFA2O43678 99 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 CCNKO75909 580 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 CYB5R3P00387 301 aaPredicted RBP5.21□□□□□ -1.58
LIG3-206ENST00000586058 HLA-AP01891 365 aaKnown RBP5.21□□□□□ -1.58
LIG3-206ENST00000586058 COX6B1P14854 86 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 SPNP16150 400 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 IL2RGP31785 369 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 PRDX2P32119 198 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 BTCP35070 178 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 EDDM3BP56851 147 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 FXYD4P59646 89 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 MSMPQ1L6U9 139 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 TMEM30BQ3MIR4 351 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 LRRC10Q5BKY1 277 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 SIGIRRQ6IA17 410 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 SLC35E4Q6ICL7 350 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 LIN54Q6MZP7 749 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 C20orf204Q6ZNR8 217 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 Q6ZS49 121 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 NLRC3Q7RTR2 1065 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 ZNF554Q86TJ5 538 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 SLC38A6Q8IZM9 456 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 PRR18Q8N4B5 295 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 GCSAMQ8N6F7 178 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms