RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 ST8SIA2Q92186 375 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 DMRTA2Q96SC8 542 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 TMEM100Q9NV29 134 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 GSKIPQ9P0R6 139 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 SSUH2Q9Y2M2 353 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 ACACAQ13085 2346 aa16.21■□□□□ 0.19
SMPD3-203ENST00000563226 KANTRA0A1W2PQU2 76 aa16.21■□□□□ 0.19
SMPD3-203ENST00000563226 TRDCB7Z8K6 153 aa16.21■□□□□ 0.19
SMPD3-203ENST00000563226 SIRPB1O00241 398 aa16.21■□□□□ 0.19
SMPD3-203ENST00000563226 DEGS1O15121 323 aa16.21■□□□□ 0.19
SMPD3-203ENST00000563226 RCC1P18754 421 aaPredicted RBP16.21■□□□□ 0.19
SMPD3-203ENST00000563226 FABP6P51161 128 aa16.21■□□□□ 0.19
SMPD3-203ENST00000563226 Q6ZR03 302 aa16.21■□□□□ 0.19
SMPD3-203ENST00000563226 COMMD7Q86VX2 200 aa16.21■□□□□ 0.19
SMPD3-203ENST00000563226 SPACA3Q8IXA5 215 aa16.21■□□□□ 0.19
SMPD3-203ENST00000563226 IFT22Q9H7X7 185 aa16.21■□□□□ 0.19
SMPD3-203ENST00000563226 RASL12Q9NYN1 266 aa16.21■□□□□ 0.19
SMPD3-203ENST00000563226 POLDIP2Q9Y2S7 368 aa16.21■□□□□ 0.19
SMPD3-203ENST00000563226 ATP23Q9Y6H3 246 aa16.21■□□□□ 0.19
SMPD3-203ENST00000563226 SLC34A2O95436 690 aa16.2■□□□□ 0.18
SMPD3-203ENST00000563226 LUMP51884 338 aaPredicted RBP16.2■□□□□ 0.18
SMPD3-203ENST00000563226 ESCO2Q56NI9 601 aa16.2■□□□□ 0.18
SMPD3-203ENST00000563226 GGNBP1Q5YKI7 109 aa16.2■□□□□ 0.18
SMPD3-203ENST00000563226 ZNF826PQ6ZT77 177 aa16.2■□□□□ 0.18
SMPD3-203ENST00000563226 INO80EQ8NBZ0 244 aaPredicted RBP16.2■□□□□ 0.18
SMPD3-203ENST00000563226 S100PBPQ96BU1 408 aa16.2■□□□□ 0.18
SMPD3-203ENST00000563226 GALNT14Q96FL9 552 aa16.2■□□□□ 0.18
SMPD3-203ENST00000563226 TRAV39A0A0B4J263 110 aa16.2■□□□□ 0.18
SMPD3-203ENST00000563226 IGKV1D-13A0A0B4J2D9 117 aa16.2■□□□□ 0.18
SMPD3-203ENST00000563226 MSGN1A6NI15 193 aa16.2■□□□□ 0.18
SMPD3-203ENST00000563226 TIMM8AO60220 97 aaPredicted RBP16.2■□□□□ 0.18
SMPD3-203ENST00000563226 OR2H2O95918 312 aa16.2■□□□□ 0.18
SMPD3-203ENST00000563226 NMBP08949 121 aa16.2■□□□□ 0.18
SMPD3-203ENST00000563226 IGKV1-13P0DP09 117 aa16.2■□□□□ 0.18
SMPD3-203ENST00000563226 IAH1Q2TAA2 248 aaPredicted RBP16.2■□□□□ 0.18
SMPD3-203ENST00000563226 FAM180AQ6UWF9 173 aa16.2■□□□□ 0.18
SMPD3-203ENST00000563226 C11orf53Q8IXP5 236 aa16.2■□□□□ 0.18
SMPD3-203ENST00000563226 PLPPR1Q8TBJ4 325 aa16.2■□□□□ 0.18
SMPD3-203ENST00000563226 GTF3AQ92664 365 aaKnown RBP16.2■□□□□ 0.18
SMPD3-203ENST00000563226 CXorf58Q96LI9 332 aa16.2■□□□□ 0.18
SMPD3-203ENST00000563226 MSL2Q9HCI7 577 aa16.2■□□□□ 0.18
SMPD3-203ENST00000563226 AMDHD2Q9Y303 409 aa16.2■□□□□ 0.18
SMPD3-203ENST00000563226 KIR2DS1A0A191URI9 304 aa16.19■□□□□ 0.18
SMPD3-203ENST00000563226 SLC33A1O00400 549 aaPredicted RBP16.19■□□□□ 0.18
SMPD3-203ENST00000563226 NXPH2O95156 264 aa16.19■□□□□ 0.18
SMPD3-203ENST00000563226 TK1P04183 234 aa16.19■□□□□ 0.18
SMPD3-203ENST00000563226 GNRHRP30968 328 aa16.19■□□□□ 0.18
SMPD3-203ENST00000563226 KIR2DS4P43632 304 aa16.19■□□□□ 0.18
SMPD3-203ENST00000563226 ZNF83P51522 516 aa16.19■□□□□ 0.18
SMPD3-203ENST00000563226 UBA52P62987 128 aaKnown RBP16.19■□□□□ 0.18
SMPD3-203ENST00000563226 KIR2DS1Q14954 304 aa16.19■□□□□ 0.18
SMPD3-203ENST00000563226 MSMPQ1L6U9 139 aa16.19■□□□□ 0.18
SMPD3-203ENST00000563226 ZNF324BQ6AW86 544 aaPredicted RBP16.19■□□□□ 0.18
SMPD3-203ENST00000563226 ZNF880Q6PDB4 577 aa16.19■□□□□ 0.18
SMPD3-203ENST00000563226 PRSS54Q6PEW0 395 aa16.19■□□□□ 0.18
SMPD3-203ENST00000563226 FAM57AQ8TBR7 257 aa16.19■□□□□ 0.18
SMPD3-203ENST00000563226 BCL2L14Q9BZR8 327 aa16.19■□□□□ 0.18
SMPD3-203ENST00000563226 RHOFQ9HBH0 211 aa16.19■□□□□ 0.18
SMPD3-203ENST00000563226 KIF25Q9UIL4 384 aa16.19■□□□□ 0.18
SMPD3-203ENST00000563226 KCNIP3Q9Y2W7 256 aa16.19■□□□□ 0.18
SMPD3-203ENST00000563226 TRBV6-6A0A0A6YYG2 114 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 TUBAL3A6NHL2 446 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 TMEM210A6NLX4 147 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 LYL1P12980 280 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 KITLGP21583 273 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 TIMP3P35625 211 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 KCNJ3P48549 501 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 CEBPDP49716 269 aaPredicted RBP16.18■□□□□ 0.18
SMPD3-203ENST00000563226 S100A10P60903 97 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 PAN3Q58A45 887 aaKnown RBP16.18■□□□□ 0.18
SMPD3-203ENST00000563226 PRAMEF6Q5VXH4 476 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 PCSK4Q6UW60 755 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 Q8IYB0 196 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 RELL2Q8NC24 303 aaPredicted RBP16.18■□□□□ 0.18
SMPD3-203ENST00000563226 LHFPL5Q8TAF8 219 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 GLYATL2Q8WU03 294 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 SECTM1Q8WVN6 248 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 TP53RKQ96S44 253 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 ZNF471Q9BX82 626 aaPredicted RBP16.18■□□□□ 0.18
SMPD3-203ENST00000563226 RIMS4Q9H426 269 aaPredicted RBP16.18■□□□□ 0.18
SMPD3-203ENST00000563226 CEP295Q9C0D2 2601 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 WNT9BO14905 357 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 TUSC2O75896 110 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 GLAP06280 429 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 NAAAQ02083 359 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 KRTCAP3Q53RY4 240 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 LYZL2Q7Z4W2 148 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 FOXRED2Q8IWF2 684 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 OR1S1Q8NH92 325 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 MSI2Q96DH6 328 aaKnown RBP16.18■□□□□ 0.18
SMPD3-203ENST00000563226 GPHA2Q96T91 129 aa16.18■□□□□ 0.18
SMPD3-203ENST00000563226 PHF1O43189 567 aaPredicted RBP16.17■□□□□ 0.18
SMPD3-203ENST00000563226 DIRAS3O95661 229 aa16.17■□□□□ 0.18
SMPD3-203ENST00000563226 RRASP10301 218 aa16.17■□□□□ 0.18
SMPD3-203ENST00000563226 HLA-DRB3P79483 266 aa16.17■□□□□ 0.18
SMPD3-203ENST00000563226 ZNF146Q15072 292 aa16.17■□□□□ 0.18
SMPD3-203ENST00000563226 ZNF718Q3SXZ3 478 aa16.17■□□□□ 0.18
SMPD3-203ENST00000563226 UNQ6126/PRO20091Q6UXV3 157 aa16.17■□□□□ 0.18
SMPD3-203ENST00000563226 LIAT1Q6ZQX7 453 aa16.17■□□□□ 0.18
SMPD3-203ENST00000563226 ZNF818PQ6ZRF7 136 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms