RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 Q8NA96 180 aa22.52■■□□□ 1.19
COL13A1-210ENST00000517713 ANKRD34BA5PLL1 514 aa22.51■■□□□ 1.19
COL13A1-210ENST00000517713 DIRAS3O95661 229 aa22.51■■□□□ 1.19
COL13A1-210ENST00000517713 ACAA1P09110 424 aaPredicted RBP22.51■■□□□ 1.19
COL13A1-210ENST00000517713 CLLU1Q5K131 121 aa22.51■■□□□ 1.19
COL13A1-210ENST00000517713 C6orf183Q5T699 404 aa22.51■■□□□ 1.19
COL13A1-210ENST00000517713 Q6ZR03 302 aa22.51■■□□□ 1.19
COL13A1-210ENST00000517713 GALNT14Q96FL9 552 aa22.51■■□□□ 1.19
COL13A1-210ENST00000517713 VRK1Q99986 396 aaPredicted RBP22.51■■□□□ 1.19
COL13A1-210ENST00000517713 SYT3Q9BQG1 590 aa22.51■■□□□ 1.19
COL13A1-210ENST00000517713 RASL12Q9NYN1 266 aa22.51■■□□□ 1.19
COL13A1-210ENST00000517713 LAMA5O15230 3695 aa22.5■■□□□ 1.19
COL13A1-210ENST00000517713 RPS10-NUDT3A0A1W2PQS6 291 aa22.5■■□□□ 1.19
COL13A1-210ENST00000517713 RNF222A6NCQ9 220 aa22.5■■□□□ 1.19
COL13A1-210ENST00000517713 OR2H2O95918 312 aa22.5■■□□□ 1.19
COL13A1-210ENST00000517713 CTXN2P0C2S0 81 aa22.5■■□□□ 1.19
COL13A1-210ENST00000517713 RAB14P61106 215 aa22.5■■□□□ 1.19
COL13A1-210ENST00000517713 HERPUD1Q15011 391 aa22.5■■□□□ 1.19
COL13A1-210ENST00000517713 ZNF146Q15072 292 aa22.5■■□□□ 1.19
COL13A1-210ENST00000517713 ALKBH2Q6NS38 261 aa22.5■■□□□ 1.19
COL13A1-210ENST00000517713 SLC51BQ86UW2 128 aa22.5■■□□□ 1.19
COL13A1-210ENST00000517713 MGAQ8IWI9 3026 aa22.5■■□□□ 1.19
COL13A1-210ENST00000517713 LINC00862A6NCI5 91 aa22.5■■□□□ 1.19
COL13A1-210ENST00000517713 M0R1B8 84 aa22.5■■□□□ 1.19
COL13A1-210ENST00000517713 PAN3Q58A45 887 aaKnown RBP22.5■■□□□ 1.19
COL13A1-210ENST00000517713 ZNF880Q6PDB4 577 aa22.5■■□□□ 1.19
COL13A1-210ENST00000517713 POC1AQ8NBT0 407 aa22.5■■□□□ 1.19
COL13A1-210ENST00000517713 INO80EQ8NBZ0 244 aaPredicted RBP22.5■■□□□ 1.19
COL13A1-210ENST00000517713 MUCL1Q96DR8 90 aa22.5■■□□□ 1.19
COL13A1-210ENST00000517713 GSX2Q9BZM3 304 aa22.5■■□□□ 1.19
COL13A1-210ENST00000517713 SIRPB1O00241 398 aa22.49■■□□□ 1.19
COL13A1-210ENST00000517713 SLC33A1O00400 549 aaPredicted RBP22.49■■□□□ 1.19
COL13A1-210ENST00000517713 PRRG2O14669 202 aa22.49■■□□□ 1.19
COL13A1-210ENST00000517713 SH2D1BO14796 132 aa22.49■■□□□ 1.19
COL13A1-210ENST00000517713 OR5AC1P0C628 307 aa22.49■■□□□ 1.19
COL13A1-210ENST00000517713 MDH2P40926 338 aaKnown RBP22.49■■□□□ 1.19
COL13A1-210ENST00000517713 TMEM187Q14656 261 aa22.49■■□□□ 1.19
COL13A1-210ENST00000517713 DOLPP1Q86YN1 238 aa22.49■■□□□ 1.19
COL13A1-210ENST00000517713 C11orf53Q8IXP5 236 aa22.49■■□□□ 1.19
COL13A1-210ENST00000517713 CCDC71LQ8N9Z2 235 aa22.49■■□□□ 1.19
COL13A1-210ENST00000517713 SPERTQ8NA61 448 aa22.49■■□□□ 1.19
COL13A1-210ENST00000517713 RNF126Q9BV68 326 aa22.49■■□□□ 1.19
COL13A1-210ENST00000517713 BOD1L1Q8NFC6 3051 aa22.49■■□□□ 1.19
COL13A1-210ENST00000517713 B3GALNT1O75752 331 aa22.48■■□□□ 1.19
COL13A1-210ENST00000517713 C3orf36Q3SXR2 165 aa22.48■■□□□ 1.19
COL13A1-210ENST00000517713 SP6Q3SY56 376 aa22.48■■□□□ 1.19
COL13A1-210ENST00000517713 SPIN3Q5JUX0 258 aa22.48■■□□□ 1.19
COL13A1-210ENST00000517713 RGS7BPQ6MZT1 257 aaPredicted RBP22.48■■□□□ 1.19
COL13A1-210ENST00000517713 OR11L1Q8NGX0 322 aa22.48■■□□□ 1.19
COL13A1-210ENST00000517713 SUCNR1Q9BXA5 334 aa22.48■■□□□ 1.19
COL13A1-210ENST00000517713 MSL2Q9HCI7 577 aa22.48■■□□□ 1.19
COL13A1-210ENST00000517713 TREM2Q9NZC2 230 aa22.48■■□□□ 1.19
COL13A1-210ENST00000517713 TRBV6-7A0A0A0MS04 114 aa22.48■■□□□ 1.19
COL13A1-210ENST00000517713 IGKV1-6A0A0C4DH72 117 aa22.48■■□□□ 1.19
COL13A1-210ENST00000517713 PCNPQ8WW12 178 aaKnown RBP22.48■■□□□ 1.19
COL13A1-210ENST00000517713 DCUN1D4Q92564 292 aa22.48■■□□□ 1.19
COL13A1-210ENST00000517713 CITED4Q96RK1 184 aa22.48■■□□□ 1.19
COL13A1-210ENST00000517713 HES4Q9HCC6 221 aa22.48■■□□□ 1.19
COL13A1-210ENST00000517713 MEMO1Q9Y316 297 aa22.48■■□□□ 1.19
COL13A1-210ENST00000517713 KANTRA0A1W2PQU2 76 aa22.47■■□□□ 1.19
COL13A1-210ENST00000517713 IFNA21P01568 189 aa22.47■■□□□ 1.19
COL13A1-210ENST00000517713 RCC1P18754 421 aaPredicted RBP22.47■■□□□ 1.19
COL13A1-210ENST00000517713 IL15RAQ13261 267 aa22.47■■□□□ 1.19
COL13A1-210ENST00000517713 BEX5Q5H9J7 111 aa22.47■■□□□ 1.19
COL13A1-210ENST00000517713 FIP1L1Q6UN15 594 aaKnown RBP22.47■■□□□ 1.19
COL13A1-210ENST00000517713 TLNRD1Q9H1K6 362 aa22.47■■□□□ 1.19
COL13A1-210ENST00000517713 GSKIPQ9P0R6 139 aa22.47■■□□□ 1.19
COL13A1-210ENST00000517713 A8MXE2 369 aa22.47■■□□□ 1.19
COL13A1-210ENST00000517713 BMP5P22003 454 aa22.47■■□□□ 1.19
COL13A1-210ENST00000517713 ALKAL2Q6UX46 152 aa22.47■■□□□ 1.19
COL13A1-210ENST00000517713 ZNF826PQ6ZT77 177 aa22.47■■□□□ 1.19
COL13A1-210ENST00000517713 OR4A4PQ8NGN8 299 aa22.47■■□□□ 1.19
COL13A1-210ENST00000517713 TUBAL3A6NHL2 446 aa22.46■■□□□ 1.19
COL13A1-210ENST00000517713 H0YIZ8 118 aa22.46■■□□□ 1.19
COL13A1-210ENST00000517713 H7C1Q1 480 aa22.46■■□□□ 1.19
COL13A1-210ENST00000517713 BCL2L11O43521 198 aa22.46■■□□□ 1.19
COL13A1-210ENST00000517713 TUSC2O75896 110 aa22.46■■□□□ 1.19
COL13A1-210ENST00000517713 GNRHRP30968 328 aa22.46■■□□□ 1.19
COL13A1-210ENST00000517713 HLA-DRB3P79483 266 aa22.46■■□□□ 1.19
COL13A1-210ENST00000517713 SHEQ5VZ18 495 aa22.46■■□□□ 1.19
COL13A1-210ENST00000517713 SCARB1Q8WTV0 552 aa22.46■■□□□ 1.19
COL13A1-210ENST00000517713 A6NLC8 198 aa22.45■■□□□ 1.18
COL13A1-210ENST00000517713 POM121CA8CG34 1229 aa22.45■■□□□ 1.18
COL13A1-210ENST00000517713 SPDEFO95238 335 aa22.45■■□□□ 1.18
COL13A1-210ENST00000517713 KCNJ3P48549 501 aa22.45■■□□□ 1.18
COL13A1-210ENST00000517713 IAH1Q2TAA2 248 aaPredicted RBP22.45■■□□□ 1.18
COL13A1-210ENST00000517713 PRAMEF6Q5VXH4 476 aa22.45■■□□□ 1.18
COL13A1-210ENST00000517713 GGNBP1Q5YKI7 109 aa22.45■■□□□ 1.18
COL13A1-210ENST00000517713 PRSS54Q6PEW0 395 aa22.45■■□□□ 1.18
COL13A1-210ENST00000517713 GFRALQ6UXV0 394 aa22.45■■□□□ 1.18
COL13A1-210ENST00000517713 FAM185AQ8N0U4 392 aa22.45■■□□□ 1.18
COL13A1-210ENST00000517713 ZNF565Q8N9K5 539 aa22.45■■□□□ 1.18
COL13A1-210ENST00000517713 PLPPR1Q8TBJ4 325 aa22.45■■□□□ 1.18
COL13A1-210ENST00000517713 MRPL24Q96A35 216 aaKnown RBP22.45■■□□□ 1.18
COL13A1-210ENST00000517713 PCDHB10Q9UN67 800 aa22.45■■□□□ 1.18
COL13A1-210ENST00000517713 SPEF1Q9Y4P9 236 aa22.45■■□□□ 1.18
COL13A1-210ENST00000517713 A0A1B0GWJ7 208 aa22.45■■□□□ 1.18
COL13A1-210ENST00000517713 CRYAAP02489 173 aa22.45■■□□□ 1.18
COL13A1-210ENST00000517713 LYL1P12980 280 aa22.45■■□□□ 1.18
COL13A1-210ENST00000517713 UBA52P62987 128 aaKnown RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms