RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 GTF2BQ00403 316 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 TMEM42Q69YG0 159 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 TMEM205Q6UW68 189 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 EPGNQ6UW88 154 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 CASP12Q6UXS9 341 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 SLC16A13Q7RTY0 426 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 RIMKLAQ8IXN7 391 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 ZNF738Q8NE65 137 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR2Z1Q8NG97 314 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR1M1Q8NGA1 313 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR10G6Q8NH81 332 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 CD200R1Q8TD46 325 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 TLCD1Q96CP7 247 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 CDCA4Q9BXL8 241 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 TLNRD1Q9H1K6 362 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 ARV1Q9H2C2 271 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 TMEM27Q9HBJ8 222 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 NIT2Q9NQR4 276 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 BIN3Q9NQY0 253 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 DHCR7Q9UBM7 475 aaKnown RBP3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 RPS6KB2Q9UBS0 482 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 ZNF391Q9UJN7 358 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 TFR2Q9UP52 801 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 DHX57Q6P158 1386 aaKnown RBP3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 ABCB11O95342 1321 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 CEP162Q5TB80 1403 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 IGLV1-50A0A075B6I6 118 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 TRAV8-7A0A075B6U6 113 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 CCDC160A6NGH7 325 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 M0R036 132 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 KCNK1O00180 336 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 GLSO94925 669 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 ATP6V1G2O95670 118 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 GPR75O95800 540 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 SLC25A27O95847 323 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 PTTG1O95997 202 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 IFNA10P01566 189 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 ORM1P02763 201 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 S100A8P05109 93 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 ZNF35P13682 527 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 CXCR1P25024 350 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 GGT2P36268 569 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 CD200P41217 278 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 DNASE1L1P49184 302 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 RBP2P50120 134 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 CDKN2DP55273 166 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 GFERP55789 205 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR10A3P58181 314 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 MAXP61244 160 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 SMIM21Q3B7S5 101 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 AKIRIN2Q53H80 203 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 TFDP3Q5H9I0 405 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 TCEAL5Q5H9L2 206 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 FAM27D1Q5T7N8 215 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 LCE3AQ5TA76 89 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 STEAP4Q687X5 459 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 DRAM2Q6UX65 266 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 Q6ZVH6 145 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 GRINAQ7Z429 371 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 ANGPTL5Q86XS5 388 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 SLC30A8Q8IWU4 369 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 CA13Q8N1Q1 262 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 SMIM20Q8N5G0 67 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR2M7Q8NG81 312 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR5AK3PQ8NH89 298 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 C11orf40Q8WZ69 217 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 SMIM12Q96EX1 92 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 RDH12Q96NR8 316 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR2A5Q96R48 311 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 TIMM17AQ99595 171 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 KLF6Q99612 283 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 SLC25A39Q9BZJ4 359 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 VCXQ9H320 206 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 NMNAT1Q9HAN9 279 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 SS18L2Q9UHA2 77 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 VAX2Q9UIW0 290 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 FARSAQ9Y285 508 aaKnown RBP3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 ARL5AQ9Y689 179 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 ZNF532Q9HCE3 1301 aa3.21□□□□□ -1.89
HMGB1P13-201ENST00000406019 CCDC144AA2RUR9 1427 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 CPSF1Q10570 1443 aaKnown RBP3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 FAM135BQ49AJ0 1406 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 ADAMTS13Q76LX8 1427 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 SMIM26A0A096LP01 95 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 TGIF2-C20orf24A0A0A6YYL0 155 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 IGHV5-10-1A0A0J9YXX1 117 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 SMIM9A6NGZ8 99 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 OR11H12B2RN74 326 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 TRIM49D1C9J1S8 452 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 G3V2T6 193 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 PLPP3O14495 311 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 SLC16A4O15374 487 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 MPZL2O60487 215 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 PTHP01270 115 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 OR5AL1P0C617 328 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 AKR1C4P17516 323 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 AKR1C3P42330 323 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 LGALS7P47929 136 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 RHOAP61586 193 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms