RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 MCHR2Q969V1 340 aa17.36■□□□□ 0.37
SHANK1-203ENST00000391813 SERTM2A0A1B0GWG4 89 aa17.35■□□□□ 0.37
SHANK1-203ENST00000391813 DEFA4P12838 97 aa17.35■□□□□ 0.37
SHANK1-203ENST00000391813 LYZL2Q7Z4W2 148 aa17.35■□□□□ 0.37
SHANK1-203ENST00000391813 ZNF738Q8NE65 137 aa17.35■□□□□ 0.37
SHANK1-203ENST00000391813 OR10G3Q8NGC4 313 aa17.35■□□□□ 0.37
SHANK1-203ENST00000391813 MRPL30Q8TCC3 161 aaKnown RBP17.35■□□□□ 0.37
SHANK1-203ENST00000391813 CBR3O75828 277 aa17.35■□□□□ 0.37
SHANK1-203ENST00000391813 CD8AP01732 235 aa17.35■□□□□ 0.37
SHANK1-203ENST00000391813 INSM1Q01101 510 aaPredicted RBP17.35■□□□□ 0.37
SHANK1-203ENST00000391813 SPACA9Q96E40 222 aaPredicted RBP17.35■□□□□ 0.37
SHANK1-203ENST00000391813 GINS3Q9BRX5 216 aa17.35■□□□□ 0.37
SHANK1-203ENST00000391813 GGACTQ9BVM4 153 aa17.35■□□□□ 0.37
SHANK1-203ENST00000391813 ELOVL1Q9BW60 279 aa17.35■□□□□ 0.37
SHANK1-203ENST00000391813 CTXND1A0A1B0GTU2 59 aa17.35■□□□□ 0.37
SHANK1-203ENST00000391813 PPYP01298 95 aa17.35■□□□□ 0.37
SHANK1-203ENST00000391813 ETV3LQ6ZN32 361 aa17.35■□□□□ 0.37
SHANK1-203ENST00000391813 NDFIP1Q9BT67 221 aa17.35■□□□□ 0.37
SHANK1-203ENST00000391813 OR5AC2Q9NZP5 309 aa17.35■□□□□ 0.37
SHANK1-203ENST00000391813 SCN10AQ9Y5Y9 1956 aa17.35■□□□□ 0.37
SHANK1-203ENST00000391813 OR2M5A3KFT3 312 aa17.35■□□□□ 0.37
SHANK1-203ENST00000391813 STARD6P59095 220 aa17.35■□□□□ 0.37
SHANK1-203ENST00000391813 TSPO2Q5TGU0 170 aa17.35■□□□□ 0.37
SHANK1-203ENST00000391813 VSTM2LQ96N03 204 aa17.35■□□□□ 0.37
SHANK1-203ENST00000391813 WDR61Q9GZS3 305 aaKnown RBP17.35■□□□□ 0.37
SHANK1-203ENST00000391813 MSL2Q9HCI7 577 aa17.35■□□□□ 0.37
SHANK1-203ENST00000391813 ZMIZ1Q9ULJ6 1067 aa17.35■□□□□ 0.37
SHANK1-203ENST00000391813 GPR132Q9UNW8 380 aa17.35■□□□□ 0.37
SHANK1-203ENST00000391813 LNP1A1A4G5 178 aa17.34■□□□□ 0.37
SHANK1-203ENST00000391813 LRRC30A6NM36 301 aa17.34■□□□□ 0.37
SHANK1-203ENST00000391813 MPZL1O95297 269 aa17.34■□□□□ 0.37
SHANK1-203ENST00000391813 CRYABP02511 175 aaKnown RBP17.34■□□□□ 0.37
SHANK1-203ENST00000391813 NHLH1Q02575 133 aa17.34■□□□□ 0.37
SHANK1-203ENST00000391813 ZNF600Q6ZNG1 722 aa17.34■□□□□ 0.37
SHANK1-203ENST00000391813 RNF133Q8WVZ7 376 aa17.34■□□□□ 0.37
SHANK1-203ENST00000391813 GSN-AS1Q9NRJ2 163 aa17.34■□□□□ 0.37
SHANK1-203ENST00000391813 ZNF835Q9Y2P0 537 aa17.34■□□□□ 0.37
SHANK1-203ENST00000391813 TRAV17A0A0B4J275 112 aa17.34■□□□□ 0.37
SHANK1-203ENST00000391813 TMEM255AQ5JRV8 349 aa17.34■□□□□ 0.37
SHANK1-203ENST00000391813 UNQ9370/PRO34162Q6UXP9 181 aa17.34■□□□□ 0.37
SHANK1-203ENST00000391813 TMEM167BQ9NRX6 74 aa17.34■□□□□ 0.37
SHANK1-203ENST00000391813 RPS4Y1P22090 263 aaKnown RBP17.34■□□□□ 0.37
SHANK1-203ENST00000391813 PRSS27Q9BQR3 290 aa17.34■□□□□ 0.37
SHANK1-203ENST00000391813 GPR61Q9BZJ8 451 aa17.34■□□□□ 0.37
SHANK1-203ENST00000391813 OR2W5A6NFC9 320 aa17.33■□□□□ 0.37
SHANK1-203ENST00000391813 ZNF729A6NN14 1252 aaPredicted RBP17.33■□□□□ 0.37
SHANK1-203ENST00000391813 DEDDO75618 318 aa17.33■□□□□ 0.37
SHANK1-203ENST00000391813 SMIM21Q3B7S5 101 aa17.33■□□□□ 0.37
SHANK1-203ENST00000391813 KCNK7Q9Y2U2 307 aa17.33■□□□□ 0.37
SHANK1-203ENST00000391813 A0A0B4J293 547 aa17.33■□□□□ 0.37
SHANK1-203ENST00000391813 M0R2Z0 102 aa17.33■□□□□ 0.37
SHANK1-203ENST00000391813 SPINK4O60575 86 aa17.33■□□□□ 0.37
SHANK1-203ENST00000391813 MMP9P14780 707 aa17.33■□□□□ 0.37
SHANK1-203ENST00000391813 PCP4P48539 62 aa17.33■□□□□ 0.37
SHANK1-203ENST00000391813 OR1P1Q8NH06 330 aa17.33■□□□□ 0.37
SHANK1-203ENST00000391813 C8orf44Q96CB5 159 aa17.33■□□□□ 0.37
SHANK1-203ENST00000391813 TAAR3PQ9P1P4 343 aa17.33■□□□□ 0.37
SHANK1-203ENST00000391813 LSM6P62312 80 aaKnown RBP17.33■□□□□ 0.36
SHANK1-203ENST00000391813 OR6X1Q8NH79 312 aa17.33■□□□□ 0.36
SHANK1-203ENST00000391813 A0A1B0GU03 582 aa17.33■□□□□ 0.36
SHANK1-203ENST00000391813 TRDCB7Z8K6 153 aa17.33■□□□□ 0.36
SHANK1-203ENST00000391813 PMS2CLQ68D20 193 aa17.33■□□□□ 0.36
SHANK1-203ENST00000391813 TMEM211Q6ICI0 200 aa17.33■□□□□ 0.36
SHANK1-203ENST00000391813 VHLLQ6RSH7 139 aa17.33■□□□□ 0.36
SHANK1-203ENST00000391813 PRSS41Q7RTY9 318 aa17.33■□□□□ 0.36
SHANK1-203ENST00000391813 GMPPAQ96IJ6 420 aaPredicted RBP17.33■□□□□ 0.36
SHANK1-203ENST00000391813 PMS2P1A4D2B8 440 aa17.32■□□□□ 0.36
SHANK1-203ENST00000391813 CIDEAO60543 219 aa17.32■□□□□ 0.36
SHANK1-203ENST00000391813 DSCR4P56555 118 aaPredicted RBP17.32■□□□□ 0.36
SHANK1-203ENST00000391813 HIST3H3Q16695 136 aa17.32■□□□□ 0.36
SHANK1-203ENST00000391813 VN1R17PQ8TDU5 208 aa17.32■□□□□ 0.36
SHANK1-203ENST00000391813 ASB10Q8WXI3 467 aa17.32■□□□□ 0.36
SHANK1-203ENST00000391813 NAGKQ9UJ70 344 aa17.32■□□□□ 0.36
SHANK1-203ENST00000391813 TRBV23-1A0A0A0MS06 115 aa17.32■□□□□ 0.36
SHANK1-203ENST00000391813 A0A1W2PQD3 144 aa17.32■□□□□ 0.36
SHANK1-203ENST00000391813 HES3Q5TGS1 186 aa17.32■□□□□ 0.36
SHANK1-203ENST00000391813 DHRS11Q6UWP2 260 aa17.32■□□□□ 0.36
SHANK1-203ENST00000391813 ALKBH3Q96Q83 286 aaPredicted RBP17.32■□□□□ 0.36
SHANK1-203ENST00000391813 FAM117AQ9C073 453 aa17.32■□□□□ 0.36
SHANK1-203ENST00000391813 SH2D2AQ9NP31 389 aa17.32■□□□□ 0.36
SHANK1-203ENST00000391813 IL2RAP01589 272 aa17.32■□□□□ 0.36
SHANK1-203ENST00000391813 HOXB3P14651 431 aaPredicted RBP17.32■□□□□ 0.36
SHANK1-203ENST00000391813 SRSF5Q13243 272 aaKnown RBP17.32■□□□□ 0.36
SHANK1-203ENST00000391813 SKP2Q13309 424 aa17.32■□□□□ 0.36
SHANK1-203ENST00000391813 MBD1Q9UIS9 605 aaPredicted RBP17.32■□□□□ 0.36
SHANK1-203ENST00000391813 A0A1W2PQF6 199 aa17.32■□□□□ 0.36
SHANK1-203ENST00000391813 MYF5P13349 255 aa17.32■□□□□ 0.36
SHANK1-203ENST00000391813 CEACAM6P40199 344 aa17.32■□□□□ 0.36
SHANK1-203ENST00000391813 DDA1Q9BW61 102 aa17.32■□□□□ 0.36
SHANK1-203ENST00000391813 MYOZ1Q9NP98 299 aaPredicted RBP17.32■□□□□ 0.36
SHANK1-203ENST00000391813 A0A096LPE4 126 aa17.31■□□□□ 0.36
SHANK1-203ENST00000391813 A0A1W2PPZ6 126 aa17.31■□□□□ 0.36
SHANK1-203ENST00000391813 NKX2-6A6NCS4 301 aa17.31■□□□□ 0.36
SHANK1-203ENST00000391813 BMPR1BO00238 502 aa17.31■□□□□ 0.36
SHANK1-203ENST00000391813 OR4B1Q8NGF8 309 aa17.31■□□□□ 0.36
SHANK1-203ENST00000391813 C12orf49Q9H741 205 aa17.31■□□□□ 0.36
SHANK1-203ENST00000391813 HSF4Q9ULV5 492 aa17.31■□□□□ 0.36
SHANK1-203ENST00000391813 PRF1P14222 555 aa17.31■□□□□ 0.36
SHANK1-203ENST00000391813 CHRNB4P30926 498 aa17.31■□□□□ 0.36
SHANK1-203ENST00000391813 SRP14P37108 136 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms