RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 FOXS1O43638 330 aa13.05□□□□□ -0.32
LRRK1-201ENST00000388948 CACNA1EQ15878 2313 aa13.05□□□□□ -0.32
LRRK1-201ENST00000388948 CCL13Q99616 98 aa13.05□□□□□ -0.32
LRRK1-201ENST00000388948 PDZD11Q5EBL8 140 aa13.05□□□□□ -0.32
LRRK1-201ENST00000388948 PERPQ96FX8 193 aa13.05□□□□□ -0.32
LRRK1-201ENST00000388948 G0S2P27469 103 aa13.04□□□□□ -0.32
LRRK1-201ENST00000388948 ACAA2P42765 397 aaKnown RBP13.04□□□□□ -0.32
LRRK1-201ENST00000388948 OR4A4PQ8NGN8 299 aa13.04□□□□□ -0.32
LRRK1-201ENST00000388948 ZNF714Q96N38 554 aa13.04□□□□□ -0.32
LRRK1-201ENST00000388948 MESP2Q0VG99 397 aa13.04□□□□□ -0.32
LRRK1-201ENST00000388948 C12orf73Q69YU5 71 aa13.04□□□□□ -0.32
LRRK1-201ENST00000388948 OR5H6Q8NGV6 325 aa13.04□□□□□ -0.32
LRRK1-201ENST00000388948 SCNM1Q9BWG6 230 aa13.04□□□□□ -0.32
LRRK1-201ENST00000388948 RPS4XP62701 263 aaKnown RBP13.04□□□□□ -0.32
LRRK1-201ENST00000388948 LY6EQ16553 131 aa13.04□□□□□ -0.32
LRRK1-201ENST00000388948 C1orf174Q8IYL3 243 aa13.04□□□□□ -0.32
LRRK1-201ENST00000388948 ARAP2Q8WZ64 1704 aa13.04□□□□□ -0.32
LRRK1-201ENST00000388948 IGHV3OR16-12A0A075B7B8 117 aa13.04□□□□□ -0.32
LRRK1-201ENST00000388948 A0A1W2PPQ1 181 aa13.04□□□□□ -0.32
LRRK1-201ENST00000388948 MYO16Q9Y6X6 1858 aa13.04□□□□□ -0.32
LRRK1-201ENST00000388948 ASAH1Q13510 395 aa13.04□□□□□ -0.32
LRRK1-201ENST00000388948 SLC25A42Q86VD7 318 aa13.04□□□□□ -0.32
LRRK1-201ENST00000388948 DNASE2BQ8WZ79 361 aa13.04□□□□□ -0.32
LRRK1-201ENST00000388948 ZNF385AQ96PM9 386 aaKnown RBP13.04□□□□□ -0.32
LRRK1-201ENST00000388948 DUSP21Q9H596 190 aa13.04□□□□□ -0.32
LRRK1-201ENST00000388948 ATAD5Q96QE3 1844 aa13.04□□□□□ -0.32
LRRK1-201ENST00000388948 SNRPGP15A8MWD9 76 aa13.04□□□□□ -0.32
LRRK1-201ENST00000388948 OR5AC1P0C628 307 aa13.04□□□□□ -0.32
LRRK1-201ENST00000388948 SLC17A5Q9NRA2 495 aa13.04□□□□□ -0.32
LRRK1-201ENST00000388948 BOLA1Q9Y3E2 137 aa13.04□□□□□ -0.32
LRRK1-201ENST00000388948 UCP2P55851 309 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 COL10A1Q03692 680 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 OR5A2Q8NGI9 324 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 FLRT3Q9NZU0 649 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 GNG4P50150 75 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 MESTQ5EB52 335 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 ZNF552Q9H707 407 aaPredicted RBP13.03□□□□□ -0.32
LRRK1-201ENST00000388948 SIRT5Q9NXA8 310 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 OR10Z1Q8NGY1 313 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 WNT2BQ93097 391 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 TMPRSS5Q9H3S3 457 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 IGHV3-21A0A0B4J1V1 117 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 A0A1W2PPE3 182 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 FXYD1O00168 92 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 CD40P25942 277 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 MMP15P51511 669 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 LINC00303Q3SY05 128 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 SMIM4Q8WVI0 70 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 A0A0J9YW62 118 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 A0A1W2PPV9 198 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 PEBP1P30086 187 aaKnown RBP13.03□□□□□ -0.32
LRRK1-201ENST00000388948 KIAA0141Q14154 515 aaPredicted RBP13.03□□□□□ -0.32
LRRK1-201ENST00000388948 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.03□□□□□ -0.32
LRRK1-201ENST00000388948 FADS6Q8N9I5 356 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 PITPNC1Q9UKF7 332 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 CDC42EP2O14613 210 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 NAT2P11245 290 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 PRDX2P32119 198 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 CDC34P49427 236 aaPredicted RBP13.03□□□□□ -0.32
LRRK1-201ENST00000388948 C21orf58P58505 322 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 ZNF770Q6IQ21 691 aaPredicted RBP13.03□□□□□ -0.32
LRRK1-201ENST00000388948 CXorf58Q96LI9 332 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 ZDHHC11Q9H8X9 412 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 ZNF586Q9NXT0 402 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 IL17BQ9UHF5 180 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 ABCA3Q99758 1704 aa13.03□□□□□ -0.32
LRRK1-201ENST00000388948 PYCARD-AS1I3L0S3 204 aa13.02□□□□□ -0.32
LRRK1-201ENST00000388948 UBE2L3P68036 154 aaKnown RBP13.02□□□□□ -0.32
LRRK1-201ENST00000388948 DRAXINQ8NBI3 349 aaPredicted RBP13.02□□□□□ -0.32
LRRK1-201ENST00000388948 NAA60Q9H7X0 242 aa13.02□□□□□ -0.32
LRRK1-201ENST00000388948 WIPI2Q9Y4P8 454 aa13.02□□□□□ -0.32
LRRK1-201ENST00000388948 OR5C1Q8NGR4 320 aa13.02□□□□□ -0.32
LRRK1-201ENST00000388948 WDR89Q96FK6 387 aaPredicted RBP13.02□□□□□ -0.32
LRRK1-201ENST00000388948 STRCP1A6NGW2 1772 aa13.02□□□□□ -0.32
LRRK1-201ENST00000388948 ORM1P02763 201 aa13.02□□□□□ -0.33
LRRK1-201ENST00000388948 PTHLHP12272 177 aa13.02□□□□□ -0.33
LRRK1-201ENST00000388948 CENPVQ7Z7K6 275 aaPredicted RBP13.02□□□□□ -0.33
LRRK1-201ENST00000388948 BAP18Q8IXM2 172 aa13.02□□□□□ -0.33
LRRK1-201ENST00000388948 EAF1Q96JC9 268 aaPredicted RBP13.02□□□□□ -0.33
LRRK1-201ENST00000388948 PLPP2O43688 288 aa13.02□□□□□ -0.33
LRRK1-201ENST00000388948 PLAURQ03405 335 aa13.02□□□□□ -0.33
LRRK1-201ENST00000388948 CDCP2Q5VXM1 449 aa13.02□□□□□ -0.33
LRRK1-201ENST00000388948 LINC01560Q8TB33 94 aa13.02□□□□□ -0.33
LRRK1-201ENST00000388948 PLPPR5Q32ZL2 321 aa13.02□□□□□ -0.33
LRRK1-201ENST00000388948 LIAT1Q6ZQX7 453 aa13.02□□□□□ -0.33
LRRK1-201ENST00000388948 FDCSPQ8NFU4 85 aa13.02□□□□□ -0.33
LRRK1-201ENST00000388948 GPR137Q96N19 417 aa13.02□□□□□ -0.33
LRRK1-201ENST00000388948 SPINK4O60575 86 aa13.02□□□□□ -0.33
LRRK1-201ENST00000388948 CLDN14O95500 239 aa13.02□□□□□ -0.33
LRRK1-201ENST00000388948 OR10AC1Q8NH08 325 aa13.02□□□□□ -0.33
LRRK1-201ENST00000388948 RBPMSQ93062 196 aaKnown RBP13.02□□□□□ -0.33
LRRK1-201ENST00000388948 KCNK17Q96T54 332 aa13.02□□□□□ -0.33
LRRK1-201ENST00000388948 TMEFF2Q9UIK5 374 aaPredicted RBP13.02□□□□□ -0.33
LRRK1-201ENST00000388948 UPK3AO75631 287 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 ZNF519Q8TB69 540 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 C10orf35Q96D05 121 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 STARD4Q96DR4 205 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 CACNA1BQ00975 2339 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 CKAP5Q14008 2032 aa13.01□□□□□ -0.33
LRRK1-201ENST00000388948 GSTZ1O43708 216 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms