RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 BPIFB3P59826 476 aa14.58□□□□□ -0.08
PHRF1-201ENST00000264555 TMEM65Q6PI78 240 aa14.58□□□□□ -0.08
PHRF1-201ENST00000264555 OR4A4PQ8NGN8 299 aa14.58□□□□□ -0.08
PHRF1-201ENST00000264555 OR51I2Q9H344 312 aa14.58□□□□□ -0.08
PHRF1-201ENST00000264555 IGHV3-43A0A0B4J1X8 118 aa14.58□□□□□ -0.08
PHRF1-201ENST00000264555 OR7C2O60412 319 aa14.58□□□□□ -0.08
PHRF1-201ENST00000264555 IGHV3-43DP0DP04 118 aa14.58□□□□□ -0.08
PHRF1-201ENST00000264555 PMELP40967 661 aa14.58□□□□□ -0.08
PHRF1-201ENST00000264555 HLA-DRB3P79483 266 aa14.58□□□□□ -0.08
PHRF1-201ENST00000264555 CEACAM21Q3KPI0 293 aa14.58□□□□□ -0.08
PHRF1-201ENST00000264555 BAGE3Q86Y29 109 aa14.58□□□□□ -0.08
PHRF1-201ENST00000264555 BAGE2Q86Y30 109 aa14.58□□□□□ -0.08
PHRF1-201ENST00000264555 NARFLQ9H6Q4 476 aa14.58□□□□□ -0.08
PHRF1-201ENST00000264555 OR2W1Q9Y3N9 320 aa14.58□□□□□ -0.08
PHRF1-201ENST00000264555 A0A1W2PP11 408 aa14.57□□□□□ -0.08
PHRF1-201ENST00000264555 SCGB1D1O95968 90 aa14.57□□□□□ -0.08
PHRF1-201ENST00000264555 SPINK2P20155 84 aa14.57□□□□□ -0.08
PHRF1-201ENST00000264555 UBE2G1P62253 170 aa14.57□□□□□ -0.08
PHRF1-201ENST00000264555 ZNF429Q86V71 674 aa14.57□□□□□ -0.08
PHRF1-201ENST00000264555 SLC35B3Q9H1N7 401 aa14.57□□□□□ -0.08
PHRF1-201ENST00000264555 VWA8A3KMH1 1905 aa14.57□□□□□ -0.08
PHRF1-201ENST00000264555 ZNF205O95201 554 aa14.57□□□□□ -0.08
PHRF1-201ENST00000264555 DYRK2Q92630 601 aa14.57□□□□□ -0.08
PHRF1-201ENST00000264555 PLXNA3P51805 1871 aa14.57□□□□□ -0.08
PHRF1-201ENST00000264555 DOCK6Q96HP0 2047 aa14.57□□□□□ -0.08
PHRF1-201ENST00000264555 OR5G3P0C626 314 aa14.57□□□□□ -0.08
PHRF1-201ENST00000264555 METTL15P1P0C7V9 234 aa14.57□□□□□ -0.08
PHRF1-201ENST00000264555 PRF1P14222 555 aa14.57□□□□□ -0.08
PHRF1-201ENST00000264555 TIGITQ495A1 244 aa14.57□□□□□ -0.08
PHRF1-201ENST00000264555 LRRC75AQ8NAA5 344 aa14.57□□□□□ -0.08
PHRF1-201ENST00000264555 NPDC1Q9NQX5 325 aaPredicted RBP14.57□□□□□ -0.08
PHRF1-201ENST00000264555 DHRS7CA6NNS2 312 aa14.57□□□□□ -0.08
PHRF1-201ENST00000264555 AGFG2O95081 481 aa14.57□□□□□ -0.08
PHRF1-201ENST00000264555 LYZL2Q7Z4W2 148 aa14.57□□□□□ -0.08
PHRF1-201ENST00000264555 OR13D1Q8NGV5 346 aa14.57□□□□□ -0.08
PHRF1-201ENST00000264555 hADV38S2A0JD32 116 aa14.56□□□□□ -0.08
PHRF1-201ENST00000264555 C3orf80F5H4A9 247 aa14.56□□□□□ -0.08
PHRF1-201ENST00000264555 SSX2Q16385 188 aa14.56□□□□□ -0.08
PHRF1-201ENST00000264555 ATP6V1FQ16864 119 aa14.56□□□□□ -0.08
PHRF1-201ENST00000264555 DCAF12L2Q5VW00 463 aa14.56□□□□□ -0.08
PHRF1-201ENST00000264555 GAL3ST2Q9H3Q3 398 aa14.56□□□□□ -0.08
PHRF1-201ENST00000264555 WSB1Q9Y6I7 421 aa14.56□□□□□ -0.08
PHRF1-201ENST00000264555 MEX3AA1L020 520 aaKnown RBP14.56□□□□□ -0.08
PHRF1-201ENST00000264555 SYNGR2O43760 224 aa14.56□□□□□ -0.08
PHRF1-201ENST00000264555 NUDT16L1Q9BRJ7 211 aaKnown RBP14.56□□□□□ -0.08
PHRF1-201ENST00000264555 FAM96BQ9Y3D0 163 aa14.56□□□□□ -0.08
PHRF1-201ENST00000264555 VMA21Q3ZAQ7 101 aa14.56□□□□□ -0.08
PHRF1-201ENST00000264555 ZNF574Q6ZN55 896 aaPredicted RBP14.56□□□□□ -0.08
PHRF1-201ENST00000264555 ZNRF4Q8WWF5 429 aa14.56□□□□□ -0.08
PHRF1-201ENST00000264555 PPP1R14DQ9NXH3 145 aa14.56□□□□□ -0.08
PHRF1-201ENST00000264555 MTCL1Q9Y4B5 1905 aaKnown RBP14.56□□□□□ -0.08
PHRF1-201ENST00000264555 OR10J4P0C629 311 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 GNG10P50151 68 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 C10orf128Q5T292 105 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 STPG2Q8N412 459 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 KDF1Q8NAX2 398 aaPredicted RBP14.55□□□□□ -0.08
PHRF1-201ENST00000264555 ARID1AO14497 2285 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 CHST1O43916 411 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 CXCL2P19875 107 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 GZMHP20718 246 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 FFAR4Q5NUL3 377 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 LINC00052Q96N35 136 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 GPR132Q9UNW8 380 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 BRWD1Q9NSI6 2320 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 SP9P0CG40 484 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 ADAM11O75078 769 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 MBPP02686 304 aaPredicted RBP14.55□□□□□ -0.08
PHRF1-201ENST00000264555 GABRA6Q16445 453 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 BTNL8Q6UX41 500 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 CHCHD2Q9Y6H1 151 aaPredicted RBP14.55□□□□□ -0.08
PHRF1-201ENST00000264555 A0A0G2JK05 382 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 LYPD3O95274 346 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 DYNLT3P51808 116 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 ZNF90Q03938 601 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 NECAP1Q8NC96 275 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 SRXN1Q9BYN0 137 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 OR2J1Q9GZK6 312 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 LPAR3Q9UBY5 353 aa14.55□□□□□ -0.08
PHRF1-201ENST00000264555 FGF2P09038 288 aa14.54□□□□□ -0.08
PHRF1-201ENST00000264555 AKR1C3P42330 323 aa14.54□□□□□ -0.08
PHRF1-201ENST00000264555 FGF12P61328 243 aa14.54□□□□□ -0.08
PHRF1-201ENST00000264555 TMEM54Q969K7 222 aa14.54□□□□□ -0.08
PHRF1-201ENST00000264555 TMEM56Q96MV1 263 aa14.54□□□□□ -0.08
PHRF1-201ENST00000264555 ATP5SQ99766 215 aa14.54□□□□□ -0.08
PHRF1-201ENST00000264555 SPTBP11277 2137 aa14.54□□□□□ -0.08
PHRF1-201ENST00000264555 H3F3AP84243 136 aa14.54□□□□□ -0.08
PHRF1-201ENST00000264555 CCL17Q92583 94 aa14.54□□□□□ -0.08
PHRF1-201ENST00000264555 ZNF331Q9NQX6 463 aaPredicted RBP14.54□□□□□ -0.08
PHRF1-201ENST00000264555 TMEM218A2RU14 115 aa14.54□□□□□ -0.08
PHRF1-201ENST00000264555 STUMQ69YW2 141 aa14.54□□□□□ -0.08
PHRF1-201ENST00000264555 ADTRPQ96IZ2 230 aa14.54□□□□□ -0.08
PHRF1-201ENST00000264555 DUXBA0A1W2PPF3 345 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 MAP1LC3B2A6NCE7 125 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 NKX2-6A6NCS4 301 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 SNAI3Q3KNW1 292 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 FAM214BQ7L5A3 538 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 ZBTB34Q8NCN2 500 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 RGP1Q92546 391 aaPredicted RBP14.53□□□□□ -0.08
PHRF1-201ENST00000264555 MAP1LC3BQ9GZQ8 125 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 RNF122Q9H9V4 155 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms