RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 GATA4P43694 442 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 TAS2R31P59538 309 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 MUC20Q8N307 709 aaPredicted RBP15.31■□□□□ 0.04
VIM-201ENST00000224237 SPICQ8N5J4 248 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 LRRC29Q8WV35 223 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 PLPPR2Q96GM1 343 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 ZNF2Q9BSG1 426 aaPredicted RBP15.31■□□□□ 0.04
VIM-201ENST00000224237 GON7Q9BXV9 100 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 RASL12Q9NYN1 266 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 OR14J1Q9UGF5 321 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 ROS1P08922 2347 aa15.3■□□□□ 0.04
VIM-201ENST00000224237 KIR2DS1A0A191URI9 304 aa15.3■□□□□ 0.04
VIM-201ENST00000224237 OR5H14A6NHG9 310 aa15.3■□□□□ 0.04
VIM-201ENST00000224237 SRRM5B3KS81 715 aa15.3■□□□□ 0.04
VIM-201ENST00000224237 H7C1Q1 480 aa15.3■□□□□ 0.04
VIM-201ENST00000224237 GNLYP22749 145 aa15.3■□□□□ 0.04
VIM-201ENST00000224237 KIR2DS4P43632 304 aa15.3■□□□□ 0.04
VIM-201ENST00000224237 DHRS2Q13268 280 aa15.3■□□□□ 0.04
VIM-201ENST00000224237 KIR2DS1Q14954 304 aa15.3■□□□□ 0.04
VIM-201ENST00000224237 ZNF660Q6AZW8 331 aaPredicted RBP15.3■□□□□ 0.04
VIM-201ENST00000224237 DHRS11Q6UWP2 260 aa15.3■□□□□ 0.04
VIM-201ENST00000224237 MRPL30Q8TCC3 161 aaKnown RBP15.3■□□□□ 0.04
VIM-201ENST00000224237 MEIKINA0A087WXM9 373 aa15.29■□□□□ 0.04
VIM-201ENST00000224237 SHISA9B4DS77 424 aa15.29■□□□□ 0.04
VIM-201ENST00000224237 FABP7O15540 132 aa15.29■□□□□ 0.04
VIM-201ENST00000224237 IGHV1-46P01743 117 aa15.29■□□□□ 0.04
VIM-201ENST00000224237 HLA-AP01891 365 aaKnown RBP15.29■□□□□ 0.04
VIM-201ENST00000224237 GSTT2P0CG29 244 aa15.29■□□□□ 0.04
VIM-201ENST00000224237 LMO1P25800 156 aa15.29■□□□□ 0.04
VIM-201ENST00000224237 RBMXP38159 391 aaKnown RBP15.29■□□□□ 0.04
VIM-201ENST00000224237 UBE2MP61081 183 aaKnown RBP15.29■□□□□ 0.04
VIM-201ENST00000224237 TNFAIP6P98066 277 aaPredicted RBP15.29■□□□□ 0.04
VIM-201ENST00000224237 LINC01560Q8TB33 94 aa15.29■□□□□ 0.04
VIM-201ENST00000224237 ITLN1Q8WWA0 313 aa15.29■□□□□ 0.04
VIM-201ENST00000224237 DIRC2Q96SL1 478 aa15.29■□□□□ 0.04
VIM-201ENST00000224237 C5orf66Q9H5L9 145 aa15.29■□□□□ 0.04
VIM-201ENST00000224237 TMEM165Q9HC07 324 aa15.29■□□□□ 0.04
VIM-201ENST00000224237 MGAT4CQ9UBM8 478 aa15.29■□□□□ 0.04
VIM-201ENST00000224237 BOLA1Q9Y3E2 137 aa15.29■□□□□ 0.04
VIM-201ENST00000224237 EPG5Q9HCE0 2579 aa15.29■□□□□ 0.04
VIM-201ENST00000224237 CHD3Q12873 2000 aaKnown RBP15.29■□□□□ 0.04
VIM-201ENST00000224237 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.29■□□□□ 0.04
VIM-201ENST00000224237 CD3EP07766 207 aa15.29■□□□□ 0.04
VIM-201ENST00000224237 GLP1RP43220 463 aa15.29■□□□□ 0.04
VIM-201ENST00000224237 FAM90A1Q86YD7 464 aa15.29■□□□□ 0.04
VIM-201ENST00000224237 DMRTC2Q8IXT2 367 aaPredicted RBP15.29■□□□□ 0.04
VIM-201ENST00000224237 TMEM185AQ8NFB2 350 aa15.29■□□□□ 0.04
VIM-201ENST00000224237 PLSCR3Q9NRY6 295 aa15.29■□□□□ 0.04
VIM-201ENST00000224237 DECR2Q9NUI1 292 aa15.29■□□□□ 0.04
VIM-201ENST00000224237 ANKHD1Q8IWZ3 2542 aaKnown RBP15.28■□□□□ 0.04
VIM-201ENST00000224237 IFNL4K9M1U5 179 aa15.28■□□□□ 0.04
VIM-201ENST00000224237 HOXA4Q00056 320 aaPredicted RBP15.28■□□□□ 0.04
VIM-201ENST00000224237 TLE1Q04724 770 aa15.28■□□□□ 0.04
VIM-201ENST00000224237 TMEM128Q5BJH2 165 aa15.28■□□□□ 0.04
VIM-201ENST00000224237 ZNF880Q6PDB4 577 aa15.28■□□□□ 0.04
VIM-201ENST00000224237 MOB1BQ7L9L4 216 aa15.28■□□□□ 0.04
VIM-201ENST00000224237 LYG2Q86SG7 212 aa15.28■□□□□ 0.04
VIM-201ENST00000224237 MOGAT3Q86VF5 341 aa15.28■□□□□ 0.04
VIM-201ENST00000224237 ADAD2Q8NCV1 583 aaKnown RBP15.28■□□□□ 0.04
VIM-201ENST00000224237 ERGIC1Q969X5 290 aa15.28■□□□□ 0.04
VIM-201ENST00000224237 DHRS9Q9BPW9 319 aa15.28■□□□□ 0.04
VIM-201ENST00000224237 ZNF436Q9C0F3 470 aaPredicted RBP15.28■□□□□ 0.04
VIM-201ENST00000224237 NPTNQ9Y639 398 aa15.28■□□□□ 0.04
VIM-201ENST00000224237 TUBAL3A6NHL2 446 aa15.27■□□□□ 0.04
VIM-201ENST00000224237 TRDCB7Z8K6 153 aa15.27■□□□□ 0.04
VIM-201ENST00000224237 ADH4P08319 380 aa15.27■□□□□ 0.04
VIM-201ENST00000224237 AKR1C4P17516 323 aa15.27■□□□□ 0.04
VIM-201ENST00000224237 ZBTB25P24278 435 aa15.27■□□□□ 0.04
VIM-201ENST00000224237 CEBPDP49716 269 aaPredicted RBP15.27■□□□□ 0.04
VIM-201ENST00000224237 IL13RA1P78552 427 aa15.27■□□□□ 0.04
VIM-201ENST00000224237 BAMBIQ13145 260 aa15.27■□□□□ 0.04
VIM-201ENST00000224237 PPP1R1AQ13522 171 aa15.27■□□□□ 0.04
VIM-201ENST00000224237 BEX5Q5H9J7 111 aa15.27■□□□□ 0.04
VIM-201ENST00000224237 ZNF497Q6ZNH5 498 aa15.27■□□□□ 0.04
VIM-201ENST00000224237 GAPTQ8N292 157 aa15.27■□□□□ 0.04
VIM-201ENST00000224237 GALNT11Q8NCW6 608 aa15.27■□□□□ 0.04
VIM-201ENST00000224237 OR2AK2Q8NG84 335 aa15.27■□□□□ 0.04
VIM-201ENST00000224237 CTXN2P0C2S0 81 aa15.27■□□□□ 0.03
VIM-201ENST00000224237 SERPINF1P36955 418 aa15.27■□□□□ 0.03
VIM-201ENST00000224237 C4orf17Q53FE4 359 aa15.27■□□□□ 0.03
VIM-201ENST00000224237 SPRNQ5BIV9 151 aa15.27■□□□□ 0.03
VIM-201ENST00000224237 Q5BKY6 102 aa15.27■□□□□ 0.03
VIM-201ENST00000224237 C20orf204Q6ZNR8 217 aa15.27■□□□□ 0.03
VIM-201ENST00000224237 C12orf45Q8N5I9 185 aaPredicted RBP15.27■□□□□ 0.03
VIM-201ENST00000224237 GCSAMQ8N6F7 178 aa15.27■□□□□ 0.03
VIM-201ENST00000224237 PLPPR1Q8TBJ4 325 aa15.27■□□□□ 0.03
VIM-201ENST00000224237 RTBDNQ9BSG5 229 aaPredicted RBP15.27■□□□□ 0.03
VIM-201ENST00000224237 LIME1Q9H400 295 aa15.27■□□□□ 0.03
VIM-201ENST00000224237 MGAT4AQ9UM21 535 aa15.27■□□□□ 0.03
VIM-201ENST00000224237 C14orf166Q9Y224 244 aaKnown RBP15.27■□□□□ 0.03
VIM-201ENST00000224237 C9orf170A2RU37 121 aa15.26■□□□□ 0.03
VIM-201ENST00000224237 RFPL4AA6NLU0 287 aa15.26■□□□□ 0.03
VIM-201ENST00000224237 C17orf100A8MU93 164 aa15.26■□□□□ 0.03
VIM-201ENST00000224237 RFPL4AL1F8VTS6 287 aa15.26■□□□□ 0.03
VIM-201ENST00000224237 M0R233 179 aa15.26■□□□□ 0.03
VIM-201ENST00000224237 PSPNO60542 156 aa15.26■□□□□ 0.03
VIM-201ENST00000224237 PGAM2P15259 253 aa15.26■□□□□ 0.03
VIM-201ENST00000224237 EGR1P18146 543 aa15.26■□□□□ 0.03
VIM-201ENST00000224237 FCGR2CP31995 323 aa15.26■□□□□ 0.03
VIM-201ENST00000224237 KCNJ3P48549 501 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 768.4 ms