RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCL1	YPR025C	RCR2	Q03446	210 aa	Known RBP	4.8	□□□□□ -1.64
CCL1	YPR025C	STP4	Q07351	490 aa		4.8	□□□□□ -1.64
CCL1	YPR025C	ZRT2	Q12436	422 aa		4.8	□□□□□ -1.64
CCL1	YPR025C	POM34	Q12445	299 aa		4.8	□□□□□ -1.64
CCL1	YPR025C	RPS9B	P05755	195 aa	Known RBP	4.79	□□□□□ -1.64
CCL1	YPR025C	PLC1	P32383	869 aa		4.79	□□□□□ -1.64
CCL1	YPR025C	BCS1	P32839	456 aa		4.79	□□□□□ -1.64
CCL1	YPR025C	YPT7	P32939	208 aa		4.79	□□□□□ -1.64
CCL1	YPR025C	TFC4	P33339	1025 aa		4.79	□□□□□ -1.64
CCL1	YPR025C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
CCL1	YPR025C	RNR4	P49723	345 aa	Known RBP	4.79	□□□□□ -1.64
CCL1	YPR025C	STB4	P50104	949 aa		4.79	□□□□□ -1.64
CCL1	YPR025C	MUK1	Q02866	612 aa		4.79	□□□□□ -1.64
CCL1	YPR025C	THI22	Q06490	572 aa		4.79	□□□□□ -1.64
CCL1	YPR025C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
CCL1	YPR025C	YKL033W-A	Q86ZR7	236 aa		4.79	□□□□□ -1.64
CCL1	YPR025C	CDC26	P14724	124 aa		4.78	□□□□□ -1.64
CCL1	YPR025C	HCA4	P20448	770 aa	Known RBP	4.78	□□□□□ -1.64
CCL1	YPR025C	IME1	P21190	360 aa		4.78	□□□□□ -1.64
CCL1	YPR025C	ATP12	P22135	325 aa		4.78	□□□□□ -1.64
CCL1	YPR025C	KIN82	P25341	720 aa		4.78	□□□□□ -1.64
CCL1	YPR025C	DGR2	P32330	852 aa		4.78	□□□□□ -1.64
CCL1	YPR025C	PCL5	P38794	229 aa		4.78	□□□□□ -1.64
CCL1	YPR025C	YIL077C	P40508	320 aa		4.78	□□□□□ -1.64
CCL1	YPR025C	BUD8	P41698	603 aa		4.78	□□□□□ -1.64
CCL1	YPR025C	IES1	P43579	692 aa		4.78	□□□□□ -1.64
CCL1	YPR025C	DAS1	P47005	663 aa		4.78	□□□□□ -1.64
CCL1	YPR025C	TEL2	P53038	688 aa		4.78	□□□□□ -1.64
CCL1	YPR025C	SLD3	P53135	668 aa		4.78	□□□□□ -1.64
CCL1	YPR025C	RIA1	P53893	1110 aa		4.78	□□□□□ -1.64
CCL1	YPR025C	ACF2	Q12168	779 aa		4.78	□□□□□ -1.64
CCL1	YPR025C	PRP22	P24384	1145 aa	Known RBP	4.77	□□□□□ -1.65
CCL1	YPR025C	FEN2	P25621	512 aa	Known RBP	4.77	□□□□□ -1.65
CCL1	YPR025C	PHO11	P35842	467 aa		4.77	□□□□□ -1.65
CCL1	YPR025C	COS111	P38308	924 aa		4.77	□□□□□ -1.65
CCL1	YPR025C	CBR1	P38626	284 aa	Known RBP	4.77	□□□□□ -1.65
CCL1	YPR025C	PHO12	P38693	467 aa		4.77	□□□□□ -1.65
CCL1	YPR025C	PIG2	P40187	538 aa		4.77	□□□□□ -1.65
CCL1	YPR025C	SSL2	Q00578	843 aa		4.77	□□□□□ -1.65
CCL1	YPR025C	NGL1	Q08213	363 aa	Known RBP	4.77	□□□□□ -1.65
CCL1	YPR025C	MLH3	Q12083	715 aa		4.77	□□□□□ -1.65
CCL1	YPR025C	SIR3	P06701	978 aa		4.76	□□□□□ -1.65
CCL1	YPR025C	COX11	P19516	300 aa	Known RBP	4.76	□□□□□ -1.65
CCL1	YPR025C	HEM12	P32347	362 aa	Predicted RBP	4.76	□□□□□ -1.65
CCL1	YPR025C	YHL017W	P38745	532 aa		4.76	□□□□□ -1.65
CCL1	YPR025C	TAF4	P50105	388 aa		4.76	□□□□□ -1.65
CCL1	YPR025C	YAP1802	P53309	568 aa		4.76	□□□□□ -1.65
CCL1	YPR025C	PPN1	Q04119	674 aa		4.76	□□□□□ -1.65
CCL1	YPR025C	OMS1	Q06668	471 aa		4.76	□□□□□ -1.65
CCL1	YPR025C	YFT2	Q06676	274 aa		4.76	□□□□□ -1.65
CCL1	YPR025C	KAR1	P11927	433 aa		4.75	□□□□□ -1.65
CCL1	YPR025C	PRP28	P23394	588 aa		4.75	□□□□□ -1.65
CCL1	YPR025C	HXT4	P32467	576 aa		4.75	□□□□□ -1.65
CCL1	YPR025C	SEC6	P32844	805 aa		4.75	□□□□□ -1.65
CCL1	YPR025C	GRX7	P38068	203 aa		4.75	□□□□□ -1.65
CCL1	YPR025C	YHR033W	P38690	423 aa		4.75	□□□□□ -1.65
CCL1	YPR025C	EMP65	P40085	556 aa		4.75	□□□□□ -1.65
CCL1	YPR025C	TIM44	Q01852	431 aa		4.75	□□□□□ -1.65
CCL1	YPR025C	IOC4	Q04213	475 aa		4.75	□□□□□ -1.65
CCL1	YPR025C	MCH5	Q08777	521 aa		4.75	□□□□□ -1.65
CCL1	YPR025C	CHS5	Q12114	671 aa	Known RBP	4.75	□□□□□ -1.65
CCL1	YPR025C	PRE4	P30657	266 aa		4.74	□□□□□ -1.65
CCL1	YPR025C	MF(ALPHA)2	P32435	120 aa		4.74	□□□□□ -1.65
CCL1	YPR025C	MOH1	P38191	138 aa		4.74	□□□□□ -1.65
CCL1	YPR025C	PEA2	P40091	420 aa		4.74	□□□□□ -1.65
CCL1	YPR025C	RFX1	P48743	811 aa		4.74	□□□□□ -1.65
CCL1	YPR025C	FHN1	P53279	174 aa		4.74	□□□□□ -1.65
CCL1	YPR025C	SND1	Q04007	877 aa		4.74	□□□□□ -1.65
CCL1	YPR025C	ECM38	Q05902	660 aa	Predicted RBP	4.74	□□□□□ -1.65
CCL1	YPR025C	HBT1	Q07653	1046 aa	Known RBP	4.74	□□□□□ -1.65
CCL1	YPR025C	CLF1	Q12309	687 aa	Predicted RBP	4.74	□□□□□ -1.65
CCL1	YPR025C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
CCL1	YPR025C	OAR1	P35731	278 aa		4.73	□□□□□ -1.65
CCL1	YPR025C	MPS3	P47069	682 aa		4.73	□□□□□ -1.65
CCL1	YPR025C	ENP2	P48234	707 aa	Known RBP	4.73	□□□□□ -1.65
CCL1	YPR025C	PEX8	P53248	589 aa		4.73	□□□□□ -1.65
CCL1	YPR025C	NSE5	Q03718	556 aa		4.73	□□□□□ -1.65
CCL1	YPR025C	CWC2	Q12046	339 aa	Predicted RBP	4.73	□□□□□ -1.65
CCL1	YPR025C	USV1	Q12132	391 aa		4.73	□□□□□ -1.65
CCL1	YPR025C	SRP68	P38687	599 aa	Known RBP	4.72	□□□□□ -1.65
CCL1	YPR025C	UBA2	P52488	636 aa		4.72	□□□□□ -1.65
CCL1	YPR025C	SPO1	P53541	631 aa		4.72	□□□□□ -1.65
CCL1	YPR025C	PHM6	Q05637	104 aa		4.72	□□□□□ -1.65
CCL1	YPR025C	PEX15	Q08215	383 aa		4.72	□□□□□ -1.65
CCL1	YPR025C	TMA7	Q3E764	64 aa	Known RBP	4.72	□□□□□ -1.65
CCL1	YPR025C	YEL076C-A	P0CX16	216 aa		4.71	□□□□□ -1.66
CCL1	YPR025C	YLR464W	P0CX17	216 aa		4.71	□□□□□ -1.66
CCL1	YPR025C	THR1	P17423	357 aa	Known RBP	4.71	□□□□□ -1.66
CCL1	YPR025C	CDS1	P38221	457 aa		4.71	□□□□□ -1.66
CCL1	YPR025C	YHR097C	P38809	366 aa	Known RBP	4.71	□□□□□ -1.66
CCL1	YPR025C	CRG1	P38892	291 aa	RIP-Chip data	4.71	□□□□□ -1.66	RIP-Chip
CCL1	YPR025C	YEL076C	P39971	216 aa		4.71	□□□□□ -1.66
CCL1	YPR025C	EAF5	P39995	279 aa		4.71	□□□□□ -1.66
CCL1	YPR025C	NDC80	P40460	691 aa		4.71	□□□□□ -1.66
CCL1	YPR025C	CTR1	P49573	406 aa		4.71	□□□□□ -1.66
CCL1	YPR025C	YGR151C	P53287	111 aa		4.71	□□□□□ -1.66
CCL1	YPR025C	ATG4	P53867	494 aa		4.71	□□□□□ -1.66
CCL1	YPR025C	TMN2	Q04562	672 aa		4.71	□□□□□ -1.66
CCL1	YPR025C	MPD2	Q99316	277 aa		4.71	□□□□□ -1.66
CCL1	YPR025C	ABF1	P14164	731 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms