RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeastyeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDE1YPL110C TIM23P32897 222 aa4.66□□□□□ -1.66
GDE1YPL110C TYE7P33122 291 aaPredicted RBP4.66□□□□□ -1.66
GDE1YPL110C SDH8P38345 138 aa4.66□□□□□ -1.66
GDE1YPL110C STB4P50104 949 aa4.66□□□□□ -1.66
GDE1YPL110C SPC19Q03954 165 aa4.66□□□□□ -1.66
GDE1YPL110C VHS3Q08438 674 aa4.66□□□□□ -1.66
GDE1YPL110C MCD1Q12158 566 aa4.66□□□□□ -1.66
GDE1YPL110C PRE10P21242 288 aaKnown RBP RIP-Chip data4.65□□□□□ -1.66 RIP-Chip
GDE1YPL110C STO1P34160 861 aaKnown RBP4.65□□□□□ -1.66
GDE1YPL110C PXL1P36166 706 aa4.65□□□□□ -1.66
GDE1YPL110C BCD1P38772 366 aa4.65□□□□□ -1.66
GDE1YPL110C BNA3P47039 444 aaKnown RBP4.65□□□□□ -1.66
GDE1YPL110C BBC1P47068 1157 aa4.65□□□□□ -1.66
GDE1YPL110C BNA1P47096 177 aa4.65□□□□□ -1.66
GDE1YPL110C NCS6P53088 359 aa4.65□□□□□ -1.66
GDE1YPL110C MEC3Q02574 474 aa4.65□□□□□ -1.66
GDE1YPL110C SEY1Q99287 776 aa4.65□□□□□ -1.66
GDE1YPL110C CDC19P00549 500 aaKnown RBP4.65□□□□□ -1.67
GDE1YPL110C ATP4P05626 244 aa4.65□□□□□ -1.67
GDE1YPL110C DCD1P06773 312 aa4.65□□□□□ -1.67
GDE1YPL110C HCA4P20448 770 aaKnown RBP4.65□□□□□ -1.67
GDE1YPL110C CNN1P43618 361 aa4.65□□□□□ -1.67
GDE1YPL110C MNN11P46985 422 aaKnown RBP4.65□□□□□ -1.67
GDE1YPL110C RNR4P49723 345 aaKnown RBP4.65□□□□□ -1.67
GDE1YPL110C MAL13P53338 473 aa4.65□□□□□ -1.67
GDE1YPL110C DXO1Q06349 442 aa4.65□□□□□ -1.67
GDE1YPL110C SNA4Q07549 140 aa4.65□□□□□ -1.67
GDE1YPL110C ADY3Q07732 790 aa4.65□□□□□ -1.67
GDE1YPL110C REX3Q12090 404 aa4.65□□□□□ -1.67
GDE1YPL110C SIR4P11978 1358 aa4.65□□□□□ -1.67
GDE1YPL110C CET1O13297 549 aaPredicted RBP4.65□□□□□ -1.67
GDE1YPL110C FBP1P09201 348 aa4.65□□□□□ -1.67
GDE1YPL110C PRP6P19735 899 aaPredicted RBP4.65□□□□□ -1.67
GDE1YPL110C MRP4P32902 394 aa4.65□□□□□ -1.67
GDE1YPL110C KAP104P38217 918 aaKnown RBP4.65□□□□□ -1.67
GDE1YPL110C RSC30P38781 883 aa4.65□□□□□ -1.67
GDE1YPL110C EDC3P39998 551 aaKnown RBP4.65□□□□□ -1.67
GDE1YPL110C SIW14P53965 281 aa4.65□□□□□ -1.67
GDE1YPL110C ECM23Q02710 187 aa4.65□□□□□ -1.67
GDE1YPL110C PML39Q03760 334 aa4.65□□□□□ -1.67
GDE1YPL110C SHE9Q04172 456 aa4.65□□□□□ -1.67
GDE1YPL110C PAB1P04147 577 aaKnown RBP RIP-Chip data4.64□□□□□ -1.67not detected
GDE1YPL110C STF2P16965 84 aa4.64□□□□□ -1.67
GDE1YPL110C NPL6P32832 435 aa4.64□□□□□ -1.67
GDE1YPL110C TYS1P36421 394 aaKnown RBP4.64□□□□□ -1.67
GDE1YPL110C DED81P38707 554 aaKnown RBP4.64□□□□□ -1.67
GDE1YPL110C LSM12P38828 187 aaKnown RBP4.64□□□□□ -1.67
GDE1YPL110C FOL2P51601 243 aaKnown RBP4.64□□□□□ -1.67
GDE1YPL110C VPS64Q03944 604 aa4.64□□□□□ -1.67
GDE1YPL110C RTN1Q04947 295 aaKnown RBP4.64□□□□□ -1.67
GDE1YPL110C YOR223WQ12015 292 aa4.64□□□□□ -1.67
GDE1YPL110C OCA6Q12454 224 aa4.64□□□□□ -1.67
GDE1YPL110C KRE5P22023 1365 aa4.64□□□□□ -1.67
GDE1YPL110C TRP2P00899 507 aaKnown RBP4.64□□□□□ -1.67
GDE1YPL110C MRPL37P36532 105 aa4.64□□□□□ -1.67
GDE1YPL110C CRP1P38845 465 aaKnown RBP4.64□□□□□ -1.67
GDE1YPL110C HRQ1Q05549 1077 aa4.64□□□□□ -1.67
GDE1YPL110C PDR8Q06149 701 aa4.64□□□□□ -1.67
GDE1YPL110C YCS4Q06156 1176 aa4.64□□□□□ -1.67
GDE1YPL110C ARG81P05085 880 aa4.64□□□□□ -1.67
GDE1YPL110C GPA2P10823 449 aa4.64□□□□□ -1.67
GDE1YPL110C RAD57P25301 460 aa4.64□□□□□ -1.67
GDE1YPL110C GFD2P25370 566 aaKnown RBP4.64□□□□□ -1.67
GDE1YPL110C RDS1P25611 832 aa4.64□□□□□ -1.67
GDE1YPL110C APL1P27351 700 aa4.64□□□□□ -1.67
GDE1YPL110C YBL010CP32788 280 aa4.64□□□□□ -1.67
GDE1YPL110C YKL050CP35736 922 aa4.64□□□□□ -1.67
GDE1YPL110C UBP11P36026 717 aa4.64□□□□□ -1.67
GDE1YPL110C THO1P40040 218 aaKnown RBP4.64□□□□□ -1.67
GDE1YPL110C YER137CP40083 148 aaKnown RBP4.64□□□□□ -1.67
GDE1YPL110C YJR120WP47157 116 aa4.64□□□□□ -1.67
GDE1YPL110C FMS1P50264 508 aa4.64□□□□□ -1.67
GDE1YPL110C YNL146WP53906 100 aa4.64□□□□□ -1.67
GDE1YPL110C RGC1Q06108 1083 aaKnown RBP4.64□□□□□ -1.67
GDE1YPL110C SFH1Q06168 426 aa4.64□□□□□ -1.67
GDE1YPL110C RTR2Q12378 196 aa4.64□□□□□ -1.67
GDE1YPL110C CIT1P00890 479 aa4.63□□□□□ -1.67
GDE1YPL110C PFK2P16862 959 aaKnown RBP RIP-Chip data4.63□□□□□ -1.67not detected
GDE1YPL110C SRO9P25567 434 aaKnown RBP4.63□□□□□ -1.67
GDE1YPL110C YMR262WP38430 313 aa4.63□□□□□ -1.67
GDE1YPL110C YHI9P38765 294 aa4.63□□□□□ -1.67
GDE1YPL110C CCT6P39079 546 aa4.63□□□□□ -1.67
GDE1YPL110C MRX1P40050 688 aa4.63□□□□□ -1.67
GDE1YPL110C SER3P40054 469 aa4.63□□□□□ -1.67
GDE1YPL110C TFB2Q02939 513 aa4.63□□□□□ -1.67
GDE1YPL110C GCN5Q03330 439 aa4.63□□□□□ -1.67
GDE1YPL110C YML082WQ04533 649 aaKnown RBP4.63□□□□□ -1.67
GDE1YPL110C TSR2Q06672 205 aaKnown RBP4.63□□□□□ -1.67
GDE1YPL110C AKR2Q12013 749 aa4.63□□□□□ -1.67
GDE1YPL110C FBP26P32604 452 aa4.63□□□□□ -1.67
GDE1YPL110C PTC3P34221 468 aaKnown RBP4.63□□□□□ -1.67
GDE1YPL110C KES1P35844 434 aaKnown RBP4.63□□□□□ -1.67
GDE1YPL110C CHK1P38147 527 aa4.63□□□□□ -1.67
GDE1YPL110C MGE1P38523 228 aa4.63□□□□□ -1.67
GDE1YPL110C EMP65P40085 556 aa4.63□□□□□ -1.67
GDE1YPL110C NDE1P40215 560 aa4.63□□□□□ -1.67
GDE1YPL110C YTA12P40341 825 aa4.63□□□□□ -1.67
GDE1YPL110C PCL10P53124 433 aa4.63□□□□□ -1.67
GDE1YPL110C RSC4Q02206 625 aa4.63□□□□□ -1.67
GDE1YPL110C VPS36Q06696 566 aa4.63□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms