RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W TOF2Q02208 771 aa2.31□□□□□ -2.04
SEC16YPL085W ECM11Q04110 302 aa2.31□□□□□ -2.04
SEC16YPL085W UFO1Q04511 668 aa2.31□□□□□ -2.04
SEC16YPL085W YOR214CQ12282 236 aa2.31□□□□□ -2.04
SEC16YPL085W SPO21Q12411 609 aa2.31□□□□□ -2.04
SEC16YPL085W AI2P03876 854 aa2.31□□□□□ -2.04
SEC16YPL085W KAR1P11927 433 aa2.31□□□□□ -2.04
SEC16YPL085W PTK1P36002 662 aaPredicted RBP2.31□□□□□ -2.04
SEC16YPL085W APN2P38207 520 aa2.31□□□□□ -2.04
SEC16YPL085W FZO1P38297 855 aa2.31□□□□□ -2.04
SEC16YPL085W HSM3P38348 480 aa2.31□□□□□ -2.04
SEC16YPL085W YHB1P39676 399 aaKnown RBP2.31□□□□□ -2.04
SEC16YPL085W YJL049WP47048 450 aa2.31□□□□□ -2.04
SEC16YPL085W RFX1P48743 811 aa2.31□□□□□ -2.04
SEC16YPL085W PAN2P53010 1115 aaPredicted RBP2.31□□□□□ -2.04
SEC16YPL085W NCS6P53088 359 aa2.31□□□□□ -2.04
SEC16YPL085W DSE4P53753 1117 aa2.31□□□□□ -2.04
SEC16YPL085W YNL193WP53870 558 aa2.31□□□□□ -2.04
SEC16YPL085W ALO1P54783 526 aaKnown RBP2.31□□□□□ -2.04
SEC16YPL085W MRS2Q01926 470 aa2.31□□□□□ -2.04
SEC16YPL085W PPN1Q04119 674 aa2.31□□□□□ -2.04
SEC16YPL085W SHE9Q04172 456 aa2.31□□□□□ -2.04
SEC16YPL085W MLC2Q06580 163 aa2.31□□□□□ -2.04
SEC16YPL085W THI3Q07471 609 aa2.31□□□□□ -2.04
SEC16YPL085W YLL054CQ12244 843 aa2.31□□□□□ -2.04
SEC16YPL085W QCR7P00128 127 aa2.31□□□□□ -2.04
SEC16YPL085W BI4P03879 638 aa2.31□□□□□ -2.04
SEC16YPL085W PPR1P07272 904 aaPredicted RBP2.31□□□□□ -2.04
SEC16YPL085W RPP1BP10622 106 aaKnown RBP2.31□□□□□ -2.04
SEC16YPL085W VMA4P22203 233 aaKnown RBP2.31□□□□□ -2.04
SEC16YPL085W NAM7P30771 971 aaKnown RBP2.31□□□□□ -2.04
SEC16YPL085W SAF1P38352 637 aa2.31□□□□□ -2.04
SEC16YPL085W SAE2P46946 345 aa2.31□□□□□ -2.04
SEC16YPL085W VTC4P47075 721 aa2.31□□□□□ -2.04
SEC16YPL085W TWF1P53250 332 aa2.31□□□□□ -2.04
SEC16YPL085W SSL2Q00578 843 aa2.31□□□□□ -2.04
SEC16YPL085W CEG1Q01159 459 aaPredicted RBP2.31□□□□□ -2.04
SEC16YPL085W RLI1Q03195 608 aaKnown RBP2.31□□□□□ -2.04
SEC16YPL085W GPI13Q07830 1017 aa2.31□□□□□ -2.04
SEC16YPL085W CPA2P03965 1118 aaKnown RBP2.31□□□□□ -2.04
SEC16YPL085W GPA1P08539 472 aa2.31□□□□□ -2.04
SEC16YPL085W HVG1P0CE11 249 aa2.31□□□□□ -2.04
SEC16YPL085W MCM1P11746 286 aa2.31□□□□□ -2.04
SEC16YPL085W PHO81P17442 1178 aa2.31□□□□□ -2.04
SEC16YPL085W ADY2P25613 283 aa2.31□□□□□ -2.04
SEC16YPL085W ECM32P32644 1121 aaKnown RBP2.31□□□□□ -2.04
SEC16YPL085W MDL2P33311 773 aa2.31□□□□□ -2.04
SEC16YPL085W CTF13P35203 478 aa2.31□□□□□ -2.04
SEC16YPL085W YKR078WP36158 585 aaKnown RBP2.31□□□□□ -2.04
SEC16YPL085W PCS60P38137 543 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
SEC16YPL085W ACF4P47129 309 aa2.31□□□□□ -2.04
SEC16YPL085W NAS6P50086 228 aa2.31□□□□□ -2.04
SEC16YPL085W UBA2P52488 636 aa2.31□□□□□ -2.04
SEC16YPL085W MAL11P53048 616 aa2.31□□□□□ -2.04
SEC16YPL085W NUT1P53114 1132 aa2.31□□□□□ -2.04
SEC16YPL085W YNR021WP53723 404 aaKnown RBP2.31□□□□□ -2.04
SEC16YPL085W BRE5P53741 515 aaKnown RBP2.31□□□□□ -2.04
SEC16YPL085W VPS9P54787 451 aa2.31□□□□□ -2.04
SEC16YPL085W ORC3P54790 616 aa2.31□□□□□ -2.04
SEC16YPL085W SPP2Q02521 185 aa2.31□□□□□ -2.04
SEC16YPL085W TAF11Q04226 346 aa2.31□□□□□ -2.04
SEC16YPL085W KRE28Q04431 385 aa2.31□□□□□ -2.04
SEC16YPL085W HFD1Q04458 532 aa2.31□□□□□ -2.04
SEC16YPL085W KAP95Q06142 861 aaKnown RBP2.31□□□□□ -2.04
SEC16YPL085W RPL17AP05740 184 aaKnown RBP2.31□□□□□ -2.04
SEC16YPL085W INO1P11986 533 aa2.31□□□□□ -2.04
SEC16YPL085W ERG6P25087 383 aaKnown RBP2.31□□□□□ -2.04
SEC16YPL085W SUV3P32580 737 aa2.31□□□□□ -2.04
SEC16YPL085W PEP12P32854 288 aa2.31□□□□□ -2.04
SEC16YPL085W MFT1P33441 392 aaKnown RBP2.31□□□□□ -2.04
SEC16YPL085W APE3P37302 537 aaKnown RBP2.31□□□□□ -2.04
SEC16YPL085W APM3P38153 483 aa2.31□□□□□ -2.04
SEC16YPL085W STP2P38704 541 aa2.31□□□□□ -2.04
SEC16YPL085W OCA5P38738 679 aa2.31□□□□□ -2.04
SEC16YPL085W BZZ1P38822 633 aa2.31□□□□□ -2.04
SEC16YPL085W CCT6P39079 546 aa2.31□□□□□ -2.04
SEC16YPL085W PAC1P39946 494 aaKnown RBP2.31□□□□□ -2.04
SEC16YPL085W NTA1P40354 457 aa2.31□□□□□ -2.04
SEC16YPL085W SEC26P41810 973 aaKnown RBP2.31□□□□□ -2.04
SEC16YPL085W POP1P41812 875 aa2.31□□□□□ -2.04
SEC16YPL085W RPL17BP46990 184 aaKnown RBP2.31□□□□□ -2.04
SEC16YPL085W VPS16Q03308 798 aa2.31□□□□□ -2.04
SEC16YPL085W MSC2Q03455 724 aa2.31□□□□□ -2.04
SEC16YPL085W ADI1Q03677 179 aa2.31□□□□□ -2.04
SEC16YPL085W YDR514CQ04408 483 aa2.31□□□□□ -2.04
SEC16YPL085W MCP2Q06567 569 aa2.31□□□□□ -2.04
SEC16YPL085W YAP7Q08182 245 aa2.31□□□□□ -2.04
SEC16YPL085W AAD15Q08361 143 aa2.31□□□□□ -2.04
SEC16YPL085W MNL2Q12205 849 aa2.31□□□□□ -2.04
SEC16YPL085W GPR1Q12361 961 aa2.31□□□□□ -2.04
SEC16YPL085W REP1P03871 373 aa2.3□□□□□ -2.04
SEC16YPL085W MEF1P25039 761 aa2.3□□□□□ -2.04
SEC16YPL085W DBF4P32325 704 aa2.3□□□□□ -2.04
SEC16YPL085W SLD2P34252 453 aa2.3□□□□□ -2.04
SEC16YPL085W GIC1P38785 314 aa2.3□□□□□ -2.04
SEC16YPL085W BOL3P39724 118 aa2.3□□□□□ -2.04
SEC16YPL085W YEL023CP39992 682 aa2.3□□□□□ -2.04
SEC16YPL085W MPH1P40562 993 aa2.3□□□□□ -2.04
SEC16YPL085W CWH41P53008 833 aa2.3□□□□□ -2.04
SEC16YPL085W MCM6P53091 1017 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 82.7 ms