RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C RPT5P33297 434 aaKnown RBP9.82□□□□□ -0.84
SPT20YOL148C SHC1P39000 512 aa9.82□□□□□ -0.84
SPT20YOL148C RIC1P40395 1056 aa9.82□□□□□ -0.84
SPT20YOL148C AIM21P40563 679 aa9.82□□□□□ -0.84
SPT20YOL148C PAN2P53010 1115 aaPredicted RBP9.82□□□□□ -0.84
SPT20YOL148C YDL057WQ07379 328 aa9.82□□□□□ -0.84
SPT20YOL148C SSC1P0CS90 654 aaKnown RBP9.82□□□□□ -0.84
SPT20YOL148C MGT1P26188 188 aa9.82□□□□□ -0.84
SPT20YOL148C ITR2P30606 609 aa9.82□□□□□ -0.84
SPT20YOL148C RAD54P32863 898 aa9.82□□□□□ -0.84
SPT20YOL148C SWP82P43554 623 aa9.82□□□□□ -0.84
SPT20YOL148C POL31P46957 487 aa9.82□□□□□ -0.84
SPT20YOL148C UBP3Q01477 912 aaKnown RBP RIP-Chip data9.82□□□□□ -0.84 RIP-Chip
SPT20YOL148C MMT1Q03218 510 aa9.82□□□□□ -0.84
SPT20YOL148C ADI1Q03677 179 aa9.82□□□□□ -0.84
SPT20YOL148C YDR239CQ03780 787 aa9.82□□□□□ -0.84
SPT20YOL148C YIG1Q08956 461 aa9.82□□□□□ -0.84
SPT20YOL148C YLR125WQ12138 136 aa9.82□□□□□ -0.84
SPT20YOL148C BRR1Q99177 341 aaPredicted RBP9.82□□□□□ -0.84
SPT20YOL148C PMS1P14242 873 aa9.81□□□□□ -0.84
SPT20YOL148C CLN1P20437 546 aa9.81□□□□□ -0.84
SPT20YOL148C MEF1P25039 761 aa9.81□□□□□ -0.84
SPT20YOL148C HSP78P33416 811 aa9.81□□□□□ -0.84
SPT20YOL148C YEL1P34225 687 aa9.81□□□□□ -0.84
SPT20YOL148C LEM3P42838 414 aa9.81□□□□□ -0.84
SPT20YOL148C BNA3P47039 444 aaKnown RBP9.81□□□□□ -0.84
SPT20YOL148C MRM2P53123 320 aa9.81□□□□□ -0.84
SPT20YOL148C LSC1P53598 329 aaKnown RBP9.81□□□□□ -0.84
SPT20YOL148C SMC5Q08204 1093 aa9.81□□□□□ -0.84
SPT20YOL148C BUD7Q08754 746 aa9.81□□□□□ -0.84
SPT20YOL148C YPL277CQ08989 487 aa9.81□□□□□ -0.84
SPT20YOL148C SLX4Q12098 748 aa9.81□□□□□ -0.84
SPT20YOL148C RRP36Q12481 300 aaPredicted RBP9.81□□□□□ -0.84
SPT20YOL148C NOT5Q12514 560 aaPredicted RBP9.81□□□□□ -0.84
SPT20YOL148C ADF1Q2V2Q1 113 aa9.81□□□□□ -0.84
SPT20YOL148C LSO1Q3E827 93 aa9.81□□□□□ -0.84
SPT20YOL148C CDC33P07260 213 aaKnown RBP9.8□□□□□ -0.84
SPT20YOL148C HEM1P09950 548 aaPredicted RBP9.8□□□□□ -0.84
SPT20YOL148C SFL1P20134 766 aa9.8□□□□□ -0.84
SPT20YOL148C RRN6P32786 894 aa9.8□□□□□ -0.84
SPT20YOL148C SMF2P38778 549 aa9.8□□□□□ -0.84
SPT20YOL148C YEL023CP39992 682 aa9.8□□□□□ -0.84
SPT20YOL148C ICP55P40051 511 aa9.8□□□□□ -0.84
SPT20YOL148C IES5P40060 125 aa9.8□□□□□ -0.84
SPT20YOL148C SNL1P40548 159 aa9.8□□□□□ -0.84
SPT20YOL148C FMP32P43557 207 aa9.8□□□□□ -0.84
SPT20YOL148C YGR111WP53265 400 aa9.8□□□□□ -0.84
SPT20YOL148C ASI2P53895 289 aa9.8□□□□□ -0.84
SPT20YOL148C AAD16Q02895 342 aa9.8□□□□□ -0.84
SPT20YOL148C RAD30Q04049 632 aa9.8□□□□□ -0.84
SPT20YOL148C AIM33Q04516 312 aa9.8□□□□□ -0.84
SPT20YOL148C MCM21Q06675 368 aa9.8□□□□□ -0.84
SPT20YOL148C UIP4Q08926 304 aa9.8□□□□□ -0.84
SPT20YOL148C TUB1P09733 447 aaKnown RBP9.79□□□□□ -0.84
SPT20YOL148C TEC1P18412 486 aa9.79□□□□□ -0.84
SPT20YOL148C UBA1P22515 1024 aaKnown RBP9.79□□□□□ -0.84
SPT20YOL148C SRO9P25567 434 aaKnown RBP9.79□□□□□ -0.84
SPT20YOL148C TFC1P32367 649 aa9.79□□□□□ -0.84
SPT20YOL148C SIP2P34164 415 aaKnown RBP9.79□□□□□ -0.84
SPT20YOL148C DUG2P38149 878 aa9.79□□□□□ -0.84
SPT20YOL148C VMA22P38784 181 aa9.79□□□□□ -0.84
SPT20YOL148C GAA1P39012 614 aa9.79□□□□□ -0.84
SPT20YOL148C EMC2P47133 292 aaKnown RBP9.79□□□□□ -0.84
SPT20YOL148C PGA2P53903 129 aa9.79□□□□□ -0.84
SPT20YOL148C YDL114WQ07530 308 aa9.79□□□□□ -0.84
SPT20YOL148C TRE1Q08919 783 aa9.79□□□□□ -0.84
SPT20YOL148C RKM1Q08961 583 aaPredicted RBP9.79□□□□□ -0.84
SPT20YOL148C NYV1Q12255 253 aa9.79□□□□□ -0.84
SPT20YOL148C ILS1P09436 1072 aaKnown RBP9.79□□□□□ -0.84
SPT20YOL148C MSD1P15179 658 aaKnown RBP9.79□□□□□ -0.84
SPT20YOL148C RCN1P36054 211 aa9.79□□□□□ -0.84
SPT20YOL148C PDX3P38075 228 aaKnown RBP9.79□□□□□ -0.84
SPT20YOL148C PEA2P40091 420 aa9.79□□□□□ -0.84
SPT20YOL148C TY4A-JP47023 414 aa9.79□□□□□ -0.84
SPT20YOL148C NUP84P52891 726 aa9.79□□□□□ -0.84
SPT20YOL148C FOL1P53848 824 aa9.79□□□□□ -0.84
SPT20YOL148C FUS2Q05670 677 aa9.79□□□□□ -0.84
SPT20YOL148C REP1P03871 373 aa9.78□□□□□ -0.84
SPT20YOL148C MSS116P15424 664 aaKnown RBP9.78□□□□□ -0.84
SPT20YOL148C POL30P15873 258 aaKnown RBP9.78□□□□□ -0.84
SPT20YOL148C FTR1P40088 404 aa9.78□□□□□ -0.84
SPT20YOL148C YTA12P40341 825 aa9.78□□□□□ -0.84
SPT20YOL148C YJL055WP47044 245 aa9.78□□□□□ -0.84
SPT20YOL148C NUT1P53114 1132 aa9.78□□□□□ -0.84
SPT20YOL148C YGR273CP53329 174 aa9.78□□□□□ -0.84
SPT20YOL148C BIO4P53630 237 aa9.78□□□□□ -0.84
SPT20YOL148C SWP1Q02795 286 aa9.78□□□□□ -0.84
SPT20YOL148C SMP3Q04174 516 aa9.78□□□□□ -0.84
SPT20YOL148C YAH1Q12184 172 aaKnown RBP9.78□□□□□ -0.84
SPT20YOL148C VCX1Q99385 411 aa9.78□□□□□ -0.84
SPT20YOL148C ACE2P21192 770 aa9.77□□□□□ -0.84
SPT20YOL148C AEP2P22136 580 aa9.77□□□□□ -0.84
SPT20YOL148C OCT1P35999 772 aa9.77□□□□□ -0.84
SPT20YOL148C GIP1P38229 639 aa9.77□□□□□ -0.84
SPT20YOL148C YBR138CP38277 524 aa9.77□□□□□ -0.84
SPT20YOL148C ASG1P40467 964 aa9.77□□□□□ -0.84
SPT20YOL148C RGD2P43556 714 aa9.77□□□□□ -0.84
SPT20YOL148C YFH7P43591 353 aa9.77□□□□□ -0.84
SPT20YOL148C YML6P51998 286 aa9.77□□□□□ -0.84
SPT20YOL148C COG2P53271 262 aa9.77□□□□□ -0.84
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms