RNA–Protein interactions for RNA: YOL124C

TRM11, Transcript of Catalytic subunit of adoMet-dependent tRNA methyltransferase complex, yeast

Gene TRM11, Length 1,302 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM11	YOL124C	PEP7	P32609	515 aa		4.69	□□□□□ -1.66
TRM11	YOL124C	UTR4	P32626	227 aa		4.69	□□□□□ -1.66
TRM11	YOL124C	GAA1	P39012	614 aa		4.69	□□□□□ -1.66
TRM11	YOL124C	FYV10	P40492	516 aa		4.69	□□□□□ -1.66
TRM11	YOL124C	RSM25	P40496	264 aa		4.69	□□□□□ -1.66
TRM11	YOL124C	DUS1	P53759	423 aa	Known RBP	4.69	□□□□□ -1.66
TRM11	YOL124C	SIW14	P53965	281 aa		4.69	□□□□□ -1.66
TRM11	YOL124C	BUL2	Q03758	920 aa	Known RBP	4.69	□□□□□ -1.66
TRM11	YOL124C	YAP6	Q03935	383 aa		4.69	□□□□□ -1.66
TRM11	YOL124C	COG8	Q04632	607 aa		4.69	□□□□□ -1.66
TRM11	YOL124C	FUS2	Q05670	677 aa		4.69	□□□□□ -1.66
TRM11	YOL124C	YLR224W	Q05947	369 aa		4.69	□□□□□ -1.66
TRM11	YOL124C	YLR225C	Q05948	407 aa	Known RBP	4.69	□□□□□ -1.66
TRM11	YOL124C	DUS3	Q06053	668 aa	Known RBP	4.69	□□□□□ -1.66
TRM11	YOL124C	NOP12	Q08208	459 aa	Known RBP	4.69	□□□□□ -1.66
TRM11	YOL124C	SLK19	Q08581	821 aa	Known RBP	4.69	□□□□□ -1.66
TRM11	YOL124C	MCD1	Q12158	566 aa		4.69	□□□□□ -1.66
TRM11	YOL124C	NBL1	Q3E7Y6	73 aa		4.69	□□□□□ -1.66
TRM11	YOL124C	RIF1	P29539	1916 aa		4.68	□□□□□ -1.66
TRM11	YOL124C	HIS4	P00815	799 aa	Known RBP	4.68	□□□□□ -1.66
TRM11	YOL124C	DCG1	P32460	244 aa		4.68	□□□□□ -1.66
TRM11	YOL124C	HIR1	P32479	840 aa		4.68	□□□□□ -1.66
TRM11	YOL124C	YKT6	P36015	200 aa	Known RBP	4.68	□□□□□ -1.66
TRM11	YOL124C	MXR1	P40029	184 aa		4.68	□□□□□ -1.66
TRM11	YOL124C	MRPS18	P42847	217 aa		4.68	□□□□□ -1.66
TRM11	YOL124C	YGL081W	P53156	320 aa		4.68	□□□□□ -1.66
TRM11	YOL124C	ORC4	P54791	529 aa		4.68	□□□□□ -1.66
TRM11	YOL124C	AIM33	Q04516	312 aa		4.68	□□□□□ -1.66
TRM11	YOL124C	CSM3	Q04659	317 aa		4.68	□□□□□ -1.66
TRM11	YOL124C	ARP6	Q12509	438 aa		4.68	□□□□□ -1.66
TRM11	YOL124C	PGK1	P00560	416 aa	Known RBP	4.67	□□□□□ -1.66
TRM11	YOL124C	YEL076C-A	P0CX16	216 aa		4.67	□□□□□ -1.66
TRM11	YOL124C	YLR464W	P0CX17	216 aa		4.67	□□□□□ -1.66
TRM11	YOL124C	TKL1	P23254	680 aa	Known RBP	4.67	□□□□□ -1.66
TRM11	YOL124C	PRE9	P23638	258 aa	Known RBP	4.67	□□□□□ -1.66
TRM11	YOL124C	PRP22	P24384	1145 aa	Known RBP	4.67	□□□□□ -1.66
TRM11	YOL124C	MKK2	P32491	506 aa		4.67	□□□□□ -1.66
TRM11	YOL124C	RGT1	P32862	1170 aa		4.67	□□□□□ -1.66
TRM11	YOL124C	TIM23	P32897	222 aa		4.67	□□□□□ -1.66
TRM11	YOL124C	SHP1	P34223	423 aa		4.67	□□□□□ -1.66
TRM11	YOL124C	DBP7	P36120	742 aa	Known RBP	4.67	□□□□□ -1.66
TRM11	YOL124C	CHS7	P38843	316 aa		4.67	□□□□□ -1.66
TRM11	YOL124C	YEL076C	P39971	216 aa		4.67	□□□□□ -1.66
TRM11	YOL124C	NUP82	P40368	713 aa		4.67	□□□□□ -1.66
TRM11	YOL124C	GPD2	P41911	440 aa	Known RBP	4.67	□□□□□ -1.66
TRM11	YOL124C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
TRM11	YOL124C	ROD1	Q02805	837 aa		4.67	□□□□□ -1.66
TRM11	YOL124C	PHM6	Q05637	104 aa		4.67	□□□□□ -1.66
TRM11	YOL124C	SMD2	Q06217	110 aa	Known RBP	4.67	□□□□□ -1.66
TRM11	YOL124C	HMI1	Q12039	706 aa		4.67	□□□□□ -1.66
TRM11	YOL124C	ERP3	Q12403	225 aa		4.67	□□□□□ -1.66
TRM11	YOL124C	SES1	P07284	462 aa	Known RBP	4.66	□□□□□ -1.66
TRM11	YOL124C	GPA1	P08539	472 aa		4.66	□□□□□ -1.66
TRM11	YOL124C	CYC8	P14922	966 aa		4.66	□□□□□ -1.66
TRM11	YOL124C	ISY1	P21374	235 aa	Predicted RBP	4.66	□□□□□ -1.66
TRM11	YOL124C	GSY1	P23337	708 aa		4.66	□□□□□ -1.66
TRM11	YOL124C	UBP11	P36026	717 aa		4.66	□□□□□ -1.66
TRM11	YOL124C	RKM3	P38222	552 aa		4.66	□□□□□ -1.66
TRM11	YOL124C	NPR3	P38742	1146 aa		4.66	□□□□□ -1.66
TRM11	YOL124C	YER130C	P39959	443 aa		4.66	□□□□□ -1.66
TRM11	YOL124C	VTC2	P43585	828 aa		4.66	□□□□□ -1.66
TRM11	YOL124C	CTR1	P49573	406 aa		4.66	□□□□□ -1.66
TRM11	YOL124C	PHO23	P50947	330 aa		4.66	□□□□□ -1.66
TRM11	YOL124C	GTF1	P53260	183 aa	Predicted RBP	4.66	□□□□□ -1.66
TRM11	YOL124C	CNM67	P53865	581 aa	Known RBP	4.66	□□□□□ -1.66
TRM11	YOL124C	CBK1	P53894	756 aa		4.66	□□□□□ -1.66
TRM11	YOL124C	YMR321C	Q04898	105 aa		4.66	□□□□□ -1.66
TRM11	YOL124C	EIS1	Q05050	843 aa	Known RBP	4.66	□□□□□ -1.66
TRM11	YOL124C	ICL2	Q12031	575 aa		4.66	□□□□□ -1.66
TRM11	YOL124C	SMC6	Q12749	1114 aa		4.66	□□□□□ -1.66
TRM11	YOL124C	ILV1	P00927	576 aa	Known RBP	4.65	□□□□□ -1.67
TRM11	YOL124C	EMC1	P25574	760 aa		4.65	□□□□□ -1.67
TRM11	YOL124C	YUR1	P26725	428 aa		4.65	□□□□□ -1.67
TRM11	YOL124C	TFC4	P33339	1025 aa		4.65	□□□□□ -1.67
TRM11	YOL124C	DEF1	P35732	738 aa	Known RBP	4.65	□□□□□ -1.67
TRM11	YOL124C	YFL054C	P43549	646 aa		4.65	□□□□□ -1.67
TRM11	YOL124C	UBA2	P52488	636 aa		4.65	□□□□□ -1.67
TRM11	YOL124C	NCS6	P53088	359 aa		4.65	□□□□□ -1.67
TRM11	YOL124C	SDA1	P53313	767 aa	Known RBP	4.65	□□□□□ -1.67
TRM11	YOL124C	MSC2	Q03455	724 aa		4.65	□□□□□ -1.67
TRM11	YOL124C	VPS13	Q07878	3144 aa		4.64	□□□□□ -1.67
TRM11	YOL124C	TUF1	P02992	437 aa	Known RBP	4.64	□□□□□ -1.67
TRM11	YOL124C	YER152C	P10356	443 aa		4.64	□□□□□ -1.67
TRM11	YOL124C	SYP1	P25623	870 aa	Known RBP	4.64	□□□□□ -1.67
TRM11	YOL124C	SRP40	P32583	406 aa	Predicted RBP	4.64	□□□□□ -1.67
TRM11	YOL124C	DID4	P36108	232 aa		4.64	□□□□□ -1.67
TRM11	YOL124C	REG2	P38232	338 aa		4.64	□□□□□ -1.67
TRM11	YOL124C	BCD1	P38772	366 aa		4.64	□□□□□ -1.67
TRM11	YOL124C	HMF1	P40037	129 aa	Known RBP	4.64	□□□□□ -1.67
TRM11	YOL124C	FIS1	P40515	155 aa		4.64	□□□□□ -1.67
TRM11	YOL124C	CNN1	P43618	361 aa		4.64	□□□□□ -1.67
TRM11	YOL124C	SEC5	P89102	971 aa		4.64	□□□□□ -1.67
TRM11	YOL124C	ADY4	Q05955	493 aa		4.64	□□□□□ -1.67
TRM11	YOL124C	MET7	Q08645	548 aa		4.64	□□□□□ -1.67
TRM11	YOL124C	RPP2A	P05319	106 aa	Known RBP	4.63	□□□□□ -1.67
TRM11	YOL124C	SRD1	P09007	221 aa		4.63	□□□□□ -1.67
TRM11	YOL124C	CLN3	P13365	580 aa		4.63	□□□□□ -1.67
TRM11	YOL124C	CLC1	P17891	233 aa		4.63	□□□□□ -1.67
TRM11	YOL124C	GSY2	P27472	705 aa		4.63	□□□□□ -1.67
TRM11	YOL124C	RME1	P32338	300 aa	Known RBP	4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms