RNA–Protein interactions for RNA: YOL022C

TSR4, Cytoplasmic protein required for correct processing of 20S pre-rRNA, yeast

Gene TSR4, Length 1,227 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR4	YOL022C	YJR120W	P47157	116 aa		4.1	□□□□□ -1.75
TSR4	YOL022C	VPS36	Q06696	566 aa		4.1	□□□□□ -1.75
TSR4	YOL022C	GUD1	Q07729	489 aa		4.1	□□□□□ -1.75
TSR4	YOL022C	YOL057W	Q08225	711 aa		4.1	□□□□□ -1.75
TSR4	YOL022C	FAP7	Q12055	197 aa	Predicted RBP	4.1	□□□□□ -1.75
TSR4	YOL022C	GRX7	P38068	203 aa		4.09	□□□□□ -1.75
TSR4	YOL022C	RIX1	P38883	763 aa	Predicted RBP	4.09	□□□□□ -1.75
TSR4	YOL022C	YHR202W	P38887	602 aa		4.09	□□□□□ -1.75
TSR4	YOL022C	CTR1	P49573	406 aa		4.09	□□□□□ -1.75
TSR4	YOL022C	LGE1	Q02796	332 aa	Known RBP	4.09	□□□□□ -1.75
TSR4	YOL022C	MTQ2	Q03920	221 aa	Predicted RBP	4.09	□□□□□ -1.75
TSR4	YOL022C	HFD1	Q04458	532 aa		4.09	□□□□□ -1.75
TSR4	YOL022C	ARO10	Q06408	635 aa		4.09	□□□□□ -1.75
TSR4	YOL022C	NDJ1	Q12366	352 aa		4.09	□□□□□ -1.75
TSR4	YOL022C	TUB1	P09733	447 aa	Known RBP	4.08	□□□□□ -1.76
TSR4	YOL022C	PRP28	P23394	588 aa		4.08	□□□□□ -1.76
TSR4	YOL022C	IMG2	P25642	146 aa	Predicted RBP	4.08	□□□□□ -1.76
TSR4	YOL022C	EUG1	P32474	517 aa		4.08	□□□□□ -1.76
TSR4	YOL022C	PPZ2	P33329	710 aa		4.08	□□□□□ -1.76
TSR4	YOL022C	MAL31	P38156	614 aa		4.08	□□□□□ -1.76
TSR4	YOL022C	PEX8	P53248	589 aa		4.08	□□□□□ -1.76
TSR4	YOL022C	GPD1	Q00055	391 aa	Known RBP	4.08	□□□□□ -1.76
TSR4	YOL022C	ISA1	Q07821	250 aa	Predicted RBP	4.08	□□□□□ -1.76
TSR4	YOL022C	DIA2	Q08496	732 aa	Predicted RBP	4.08	□□□□□ -1.76
TSR4	YOL022C	CHS5	Q12114	671 aa	Known RBP	4.08	□□□□□ -1.76
TSR4	YOL022C	TOP1	P04786	769 aa		4.07	□□□□□ -1.76
TSR4	YOL022C	ILV6	P25605	309 aa	Known RBP	4.07	□□□□□ -1.76
TSR4	YOL022C	FEN2	P25621	512 aa	Known RBP	4.07	□□□□□ -1.76
TSR4	YOL022C	FUB1	P25659	250 aa		4.07	□□□□□ -1.76
TSR4	YOL022C	MSS1	P32559	526 aa	Predicted RBP	4.07	□□□□□ -1.76
TSR4	YOL022C	YBR071W	P38243	211 aa		4.07	□□□□□ -1.76
TSR4	YOL022C	CKB2	P38930	258 aa		4.07	□□□□□ -1.76
TSR4	YOL022C	YEL020C	P39994	560 aa		4.07	□□□□□ -1.76
TSR4	YOL022C	PIG2	P40187	538 aa		4.07	□□□□□ -1.76
TSR4	YOL022C	TPM2	P40414	161 aa		4.07	□□□□□ -1.76
TSR4	YOL022C	NOP2	P40991	618 aa	Known RBP	4.07	□□□□□ -1.76
TSR4	YOL022C	BIT61	P47041	543 aa		4.07	□□□□□ -1.76
TSR4	YOL022C	YJR096W	P47137	282 aa		4.07	□□□□□ -1.76
TSR4	YOL022C	RFX1	P48743	811 aa		4.07	□□□□□ -1.76
TSR4	YOL022C	RCR2	Q03446	210 aa	Known RBP	4.07	□□□□□ -1.76
TSR4	YOL022C	POM34	Q12445	299 aa		4.07	□□□□□ -1.76
TSR4	YOL022C	FRS1	P15624	595 aa	Known RBP	4.06	□□□□□ -1.76
TSR4	YOL022C	IME1	P21190	360 aa		4.06	□□□□□ -1.76
TSR4	YOL022C	PRP19	P32523	503 aa	Known RBP	4.06	□□□□□ -1.76
TSR4	YOL022C	PET127	P32606	800 aa		4.06	□□□□□ -1.76
TSR4	YOL022C	PEX2	P32800	271 aa		4.06	□□□□□ -1.76
TSR4	YOL022C	YKU70	P32807	602 aa		4.06	□□□□□ -1.76
TSR4	YOL022C	RET2	P43621	546 aa		4.06	□□□□□ -1.76
TSR4	YOL022C	MPS3	P47069	682 aa		4.06	□□□□□ -1.76
TSR4	YOL022C	IMO32	P53219	342 aa		4.06	□□□□□ -1.76
TSR4	YOL022C	YGR151C	P53287	111 aa		4.06	□□□□□ -1.76
TSR4	YOL022C	COG6	P53959	839 aa		4.06	□□□□□ -1.76
TSR4	YOL022C	APM1	Q00776	475 aa	Predicted RBP	4.06	□□□□□ -1.76
TSR4	YOL022C	VHS3	Q08438	674 aa		4.06	□□□□□ -1.76
TSR4	YOL022C	ERG20	P08524	352 aa	Known RBP	4.05	□□□□□ -1.76
TSR4	YOL022C	SWI6	P09959	803 aa		4.05	□□□□□ -1.76
TSR4	YOL022C	GMH1	P36125	273 aa		4.05	□□□□□ -1.76
TSR4	YOL022C	YHR097C	P38809	366 aa	Known RBP	4.05	□□□□□ -1.76
TSR4	YOL022C	MIT1	P40002	666 aa		4.05	□□□□□ -1.76
TSR4	YOL022C	YIL077C	P40508	320 aa		4.05	□□□□□ -1.76
TSR4	YOL022C	YLR407W	Q06070	228 aa		4.05	□□□□□ -1.76
TSR4	YOL022C	YPS7	Q06325	596 aa		4.05	□□□□□ -1.76
TSR4	YOL022C	YKR075C	P36155	307 aa		4.04	□□□□□ -1.76
TSR4	YOL022C	CTP1	P38152	299 aa		4.04	□□□□□ -1.76
TSR4	YOL022C	MUP3	P38734	546 aa		4.04	□□□□□ -1.76
TSR4	YOL022C	TDA3	P38758	523 aa		4.04	□□□□□ -1.76
TSR4	YOL022C	OAF1	P39720	1047 aa	Predicted RBP	4.04	□□□□□ -1.76
TSR4	YOL022C	KHA1	P40309	873 aa		4.04	□□□□□ -1.76
TSR4	YOL022C	YFT2	Q06676	274 aa		4.04	□□□□□ -1.76
TSR4	YOL022C	YDL086W	Q07505	273 aa		4.04	□□□□□ -1.76
TSR4	YOL022C	TRE2	Q08693	809 aa		4.04	□□□□□ -1.76
TSR4	YOL022C	BMS1	Q08965	1183 aa	Known RBP	4.04	□□□□□ -1.76
TSR4	YOL022C	YTM1	Q12024	460 aa	Predicted RBP	4.04	□□□□□ -1.76
TSR4	YOL022C	RPN13	O13563	156 aa		4.03	□□□□□ -1.76
TSR4	YOL022C	SPO11	P23179	398 aa		4.03	□□□□□ -1.76
TSR4	YOL022C	YMC2	P38087	329 aa		4.03	□□□□□ -1.76
TSR4	YOL022C	COS111	P38308	924 aa		4.03	□□□□□ -1.76
TSR4	YOL022C	KSP1	P38691	1029 aa	Known RBP	4.03	□□□□□ -1.76
TSR4	YOL022C	CCT5	P40413	562 aa	Known RBP	4.03	□□□□□ -1.76
TSR4	YOL022C	SNF12	P53628	566 aa		4.03	□□□□□ -1.76
TSR4	YOL022C	TGL2	P54857	326 aa		4.03	□□□□□ -1.76
TSR4	YOL022C	SND1	Q04007	877 aa		4.03	□□□□□ -1.76
TSR4	YOL022C	COQ11	Q05892	277 aa		4.03	□□□□□ -1.76
TSR4	YOL022C	TMA7	Q3E764	64 aa	Known RBP	4.03	□□□□□ -1.76
TSR4	YOL022C	KIN82	P25341	720 aa		4.02	□□□□□ -1.77
TSR4	YOL022C	PLC1	P32383	869 aa		4.02	□□□□□ -1.77
TSR4	YOL022C	HXT6	P39003	570 aa	Known RBP	4.02	□□□□□ -1.77
TSR4	YOL022C	HXT7	P39004	570 aa		4.02	□□□□□ -1.77
TSR4	YOL022C	PAC2	P39937	518 aa		4.02	□□□□□ -1.77
TSR4	YOL022C	BUD8	P41698	603 aa		4.02	□□□□□ -1.77
TSR4	YOL022C	GZF3	P42944	551 aa	Known RBP	4.02	□□□□□ -1.77
TSR4	YOL022C	DUG1	P43616	481 aa	Known RBP	4.02	□□□□□ -1.77
TSR4	YOL022C	MRK1	P50873	501 aa		4.02	□□□□□ -1.77
TSR4	YOL022C	PEX14	P53112	341 aa		4.02	□□□□□ -1.77
TSR4	YOL022C	YMR210W	Q03649	449 aa		4.02	□□□□□ -1.77
TSR4	YOL022C	YSH1	Q06224	779 aa	Predicted RBP	4.02	□□□□□ -1.77
TSR4	YOL022C	STP4	Q07351	490 aa		4.02	□□□□□ -1.77
TSR4	YOL022C	IZH3	Q07959	543 aa		4.02	□□□□□ -1.77
TSR4	YOL022C	YOR378W	Q08902	515 aa		4.02	□□□□□ -1.77
TSR4	YOL022C	SLX4	Q12098	748 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms