RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C RKI1Q12189 258 aa3.08□□□□□ -1.92
VTI1YMR197C RGT2Q12300 763 aa3.08□□□□□ -1.92
VTI1YMR197C MDM20Q12387 796 aaKnown RBP3.08□□□□□ -1.92
VTI1YMR197C YOL098CQ12496 1037 aa3.08□□□□□ -1.92
VTI1YMR197C SRP40P32583 406 aaPredicted RBP3.07□□□□□ -1.92
VTI1YMR197C PBP2P38151 413 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
VTI1YMR197C SSZ1P38788 538 aaKnown RBP3.07□□□□□ -1.92
VTI1YMR197C HFD1Q04458 532 aa3.07□□□□□ -1.92
VTI1YMR197C ISA1Q07821 250 aaPredicted RBP3.07□□□□□ -1.92
VTI1YMR197C TPK2P06245 380 aa3.06□□□□□ -1.92
VTI1YMR197C ERG20P08524 352 aaKnown RBP3.06□□□□□ -1.92
VTI1YMR197C APN1P22936 367 aa3.06□□□□□ -1.92
VTI1YMR197C YKL091CP33324 310 aaKnown RBP3.06□□□□□ -1.92
VTI1YMR197C AIM14P53109 570 aa3.06□□□□□ -1.92
VTI1YMR197C DIP5P53388 608 aa3.06□□□□□ -1.92
VTI1YMR197C RPN4Q03465 531 aa3.06□□□□□ -1.92
VTI1YMR197C YDR179W-AQ03983 463 aa3.06□□□□□ -1.92
VTI1YMR197C VPS36Q06696 566 aa3.06□□□□□ -1.92
VTI1YMR197C POM34Q12445 299 aa3.06□□□□□ -1.92
VTI1YMR197C HMG1P12683 1054 aa3.05□□□□□ -1.92
VTI1YMR197C SEC15P22224 910 aa3.05□□□□□ -1.92
VTI1YMR197C NTH1P32356 751 aa3.05□□□□□ -1.92
VTI1YMR197C MSS1P32559 526 aaPredicted RBP3.05□□□□□ -1.92
VTI1YMR197C AKL1P38080 1108 aaKnown RBP3.05□□□□□ -1.92
VTI1YMR197C COS111P38308 924 aa3.05□□□□□ -1.92
VTI1YMR197C YHR202WP38887 602 aa3.05□□□□□ -1.92
VTI1YMR197C SCS3P53012 380 aa3.05□□□□□ -1.92
VTI1YMR197C SNF12P53628 566 aa3.05□□□□□ -1.92
VTI1YMR197C MBR1P23493 339 aa3.04□□□□□ -1.92
VTI1YMR197C ELF1P36053 145 aa3.04□□□□□ -1.92
VTI1YMR197C HOT13P36078 116 aa3.04□□□□□ -1.92
VTI1YMR197C NUP82P40368 713 aa3.04□□□□□ -1.92
VTI1YMR197C YJR039WP47107 1121 aa3.04□□□□□ -1.92
VTI1YMR197C MPS1P54199 764 aa3.04□□□□□ -1.92
VTI1YMR197C UFO1Q04511 668 aa3.04□□□□□ -1.92
VTI1YMR197C ATG33Q06485 197 aa3.04□□□□□ -1.92
VTI1YMR197C YFT2Q06676 274 aa3.04□□□□□ -1.92
VTI1YMR197C DCS2Q12123 353 aa3.04□□□□□ -1.92
VTI1YMR197C YLR125WQ12138 136 aa3.04□□□□□ -1.92
VTI1YMR197C YTA7P40340 1379 aa3.03□□□□□ -1.92
VTI1YMR197C RPS9BP05755 195 aaKnown RBP3.03□□□□□ -1.92
VTI1YMR197C PHO8P11491 566 aa3.03□□□□□ -1.92
VTI1YMR197C PCL2P25693 308 aa3.03□□□□□ -1.92
VTI1YMR197C MSH2P25847 964 aa3.03□□□□□ -1.92
VTI1YMR197C PEX6P33760 1030 aa3.03□□□□□ -1.92
VTI1YMR197C NUG1P40010 520 aaKnown RBP3.03□□□□□ -1.92
VTI1YMR197C CCT5P40413 562 aaKnown RBP3.03□□□□□ -1.92
VTI1YMR197C BUD6P41697 788 aa3.03□□□□□ -1.92
VTI1YMR197C BIT61P47041 543 aa3.03□□□□□ -1.92
VTI1YMR197C GPD1Q00055 391 aaKnown RBP3.03□□□□□ -1.92
VTI1YMR197C NGL2Q03264 515 aaKnown RBP3.03□□□□□ -1.92
VTI1YMR197C VHS3Q08438 674 aa3.03□□□□□ -1.92
VTI1YMR197C FRS1P15624 595 aaKnown RBP3.02□□□□□ -1.93
VTI1YMR197C KIN82P25341 720 aa3.02□□□□□ -1.93
VTI1YMR197C AAD3P25612 363 aa3.02□□□□□ -1.93
VTI1YMR197C BRN1P38170 754 aa3.02□□□□□ -1.93
VTI1YMR197C PCM1P38628 557 aaKnown RBP3.02□□□□□ -1.93
VTI1YMR197C UGO1Q03327 502 aa3.02□□□□□ -1.93
VTI1YMR197C COG8Q04632 607 aa3.02□□□□□ -1.93
VTI1YMR197C ARG7Q04728 441 aa3.02□□□□□ -1.93
VTI1YMR197C GIN4Q12263 1142 aa3.02□□□□□ -1.93
VTI1YMR197C AI5_ALPHAQ9ZZX1 630 aa3.02□□□□□ -1.93
VTI1YMR197C SFL1P20134 766 aa3.01□□□□□ -1.93
VTI1YMR197C IMG2P25642 146 aaPredicted RBP3.01□□□□□ -1.93
VTI1YMR197C THI4P32318 326 aa3.01□□□□□ -1.93
VTI1YMR197C PET127P32606 800 aa3.01□□□□□ -1.93
VTI1YMR197C YPT7P32939 208 aa3.01□□□□□ -1.93
VTI1YMR197C ULP2P40537 1034 aaPredicted RBP3.01□□□□□ -1.93
VTI1YMR197C PIP2P52960 996 aa3.01□□□□□ -1.93
VTI1YMR197C STP1Q00947 519 aa3.01□□□□□ -1.93
VTI1YMR197C TRS23Q03784 219 aa3.01□□□□□ -1.93
VTI1YMR197C IZH3Q07959 543 aa3.01□□□□□ -1.93
VTI1YMR197C TOP1P04786 769 aa3□□□□□ -1.93
VTI1YMR197C STE4P18851 423 aa3□□□□□ -1.93
VTI1YMR197C YEL1P34225 687 aa3□□□□□ -1.93
VTI1YMR197C YKR075CP36155 307 aa3□□□□□ -1.93
VTI1YMR197C BPL1P48445 690 aaPredicted RBP3□□□□□ -1.93
VTI1YMR197C YGL117WP53133 265 aa3□□□□□ -1.93
VTI1YMR197C RCR2Q03446 210 aaKnown RBP3□□□□□ -1.93
VTI1YMR197C VBA4Q04602 768 aaKnown RBP3□□□□□ -1.93
VTI1YMR197C OCA5P38738 679 aa2.99□□□□□ -1.93
VTI1YMR197C BEM4P39011 633 aa2.99□□□□□ -1.93
VTI1YMR197C PSA1P41940 361 aaKnown RBP2.99□□□□□ -1.93
VTI1YMR197C CPR8P53728 308 aa2.99□□□□□ -1.93
VTI1YMR197C DAK1P54838 584 aaKnown RBP2.99□□□□□ -1.93
VTI1YMR197C ORM2Q06144 216 aa2.99□□□□□ -1.93
VTI1YMR197C FPR4Q06205 392 aaPredicted RBP2.99□□□□□ -1.93
VTI1YMR197C CIR2Q08822 631 aa2.99□□□□□ -1.93
VTI1YMR197C LEU2P04173 364 aaPredicted RBP2.98□□□□□ -1.93
VTI1YMR197C YUR1P26725 428 aa2.98□□□□□ -1.93
VTI1YMR197C YKU70P32807 602 aa2.98□□□□□ -1.93
VTI1YMR197C MAL31P38156 614 aa2.98□□□□□ -1.93
VTI1YMR197C RIM4P38741 713 aa2.98□□□□□ -1.93
VTI1YMR197C DOS2P54858 310 aa2.98□□□□□ -1.93
VTI1YMR197C YMR210WQ03649 449 aa2.98□□□□□ -1.93
VTI1YMR197C GEP3Q08622 556 aa2.98□□□□□ -1.93
VTI1YMR197C IME1P21190 360 aa2.97□□□□□ -1.93
VTI1YMR197C THI6P41835 540 aa2.97□□□□□ -1.93
VTI1YMR197C TDA9Q04545 1251 aa2.97□□□□□ -1.93
VTI1YMR197C YLR407WQ06070 228 aa2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms