RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C YPL277CQ08989 487 aa5.47□□□□□ -1.53
CCS1YMR038C NUM1Q00402 2748 aa5.47□□□□□ -1.53
CCS1YMR038C RPS13P05756 151 aaKnown RBP5.46□□□□□ -1.54
CCS1YMR038C SWI6P09959 803 aa5.46□□□□□ -1.54
CCS1YMR038C SAM1P10659 382 aaKnown RBP5.46□□□□□ -1.54
CCS1YMR038C RAD18P10862 487 aa5.46□□□□□ -1.54
CCS1YMR038C POX1P13711 748 aa5.46□□□□□ -1.54
CCS1YMR038C POT1P27796 417 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
CCS1YMR038C DOM34P33309 386 aa5.46□□□□□ -1.54
CCS1YMR038C VID27P40157 782 aa5.46□□□□□ -1.54
CCS1YMR038C NUP82P40368 713 aa5.46□□□□□ -1.54
CCS1YMR038C MLC1P53141 149 aa5.46□□□□□ -1.54
CCS1YMR038C ART5P53244 586 aaKnown RBP5.46□□□□□ -1.54
CCS1YMR038C YPR196WQ06595 470 aa5.46□□□□□ -1.54
CCS1YMR038C YOR352WQ08816 343 aa5.46□□□□□ -1.54
CCS1YMR038C PDR18P53756 1333 aa5.46□□□□□ -1.54
CCS1YMR038C CHO2P05374 869 aaKnown RBP5.45□□□□□ -1.54
CCS1YMR038C TOM70P07213 617 aaKnown RBP5.45□□□□□ -1.54
CCS1YMR038C ENA1P13587 1091 aa5.45□□□□□ -1.54
CCS1YMR038C COQ1P18900 473 aa5.45□□□□□ -1.54
CCS1YMR038C PRP6P19735 899 aaPredicted RBP5.45□□□□□ -1.54
CCS1YMR038C CAD1P24813 409 aaKnown RBP5.45□□□□□ -1.54
CCS1YMR038C SHP1P34223 423 aa5.45□□□□□ -1.54
CCS1YMR038C THI80P35202 319 aa5.45□□□□□ -1.54
CCS1YMR038C FPR3P38911 411 aaKnown RBP5.45□□□□□ -1.54
CCS1YMR038C GCV2P49095 1034 aa5.45□□□□□ -1.54
CCS1YMR038C SCS3P53012 380 aa5.45□□□□□ -1.54
CCS1YMR038C GTF1P53260 183 aaPredicted RBP5.45□□□□□ -1.54
CCS1YMR038C ENA2Q01896 1091 aa5.45□□□□□ -1.54
CCS1YMR038C ADY3Q07732 790 aa5.45□□□□□ -1.54
CCS1YMR038C ISA1Q07821 250 aaPredicted RBP5.45□□□□□ -1.54
CCS1YMR038C ENV7Q12003 364 aa5.45□□□□□ -1.54
CCS1YMR038C ENA5Q12691 1091 aa5.45□□□□□ -1.54
CCS1YMR038C SOD2P00447 233 aa5.44□□□□□ -1.54
CCS1YMR038C PHR1P05066 565 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
CCS1YMR038C HSF1P10961 833 aa5.44□□□□□ -1.54
CCS1YMR038C YUR1P26725 428 aa5.44□□□□□ -1.54
CCS1YMR038C PRO3P32263 286 aaKnown RBP5.44□□□□□ -1.54
CCS1YMR038C MOT1P32333 1867 aa5.44□□□□□ -1.54
CCS1YMR038C TFC4P33339 1025 aa5.44□□□□□ -1.54
CCS1YMR038C NMD2P38798 1089 aaKnown RBP5.44□□□□□ -1.54
CCS1YMR038C RTS1P38903 757 aa5.44□□□□□ -1.54
CCS1YMR038C ALD5P40047 520 aaKnown RBP5.44□□□□□ -1.54
CCS1YMR038C FMP10P40098 244 aa5.44□□□□□ -1.54
CCS1YMR038C RIM8P53179 542 aa5.44□□□□□ -1.54
CCS1YMR038C YGL039WP53183 348 aaKnown RBP5.44□□□□□ -1.54
CCS1YMR038C EMI2Q04409 500 aaKnown RBP5.44□□□□□ -1.54
CCS1YMR038C TPO1Q07824 586 aa5.44□□□□□ -1.54
CCS1YMR038C GPB1Q08886 897 aa5.44□□□□□ -1.54
CCS1YMR038C TRM11Q12463 433 aa5.44□□□□□ -1.54
CCS1YMR038C RAD61Q99359 647 aa5.44□□□□□ -1.54
CCS1YMR038C SNA3P14359 133 aa5.43□□□□□ -1.54
CCS1YMR038C PHO88P38264 188 aaPredicted RBP5.43□□□□□ -1.54
CCS1YMR038C GYP8P43570 497 aa5.43□□□□□ -1.54
CCS1YMR038C SPT20P50875 604 aa5.43□□□□□ -1.54
CCS1YMR038C MAL11P53048 616 aa5.43□□□□□ -1.54
CCS1YMR038C YRB30P53107 440 aaPredicted RBP5.43□□□□□ -1.54
CCS1YMR038C TMA64Q04600 565 aaKnown RBP5.43□□□□□ -1.54
CCS1YMR038C MRD1Q06106 887 aaKnown RBP5.43□□□□□ -1.54
CCS1YMR038C HMI1Q12039 706 aa5.43□□□□□ -1.54
CCS1YMR038C LAM4P38800 1345 aa5.43□□□□□ -1.54
CCS1YMR038C SEN1Q00416 2231 aaKnown RBP5.42□□□□□ -1.54
CCS1YMR038C SPE1P08432 466 aa5.42□□□□□ -1.54
CCS1YMR038C CDC20P26309 610 aa5.42□□□□□ -1.54
CCS1YMR038C TGL1P34163 548 aa5.42□□□□□ -1.54
CCS1YMR038C POA1P38218 177 aa5.42□□□□□ -1.54
CCS1YMR038C REG2P38232 338 aa5.42□□□□□ -1.54
CCS1YMR038C VPS8P39702 1274 aa5.42□□□□□ -1.54
CCS1YMR038C GDH3P39708 457 aa5.42□□□□□ -1.54
CCS1YMR038C ENP2P48234 707 aaKnown RBP5.42□□□□□ -1.54
CCS1YMR038C AZR1P50080 613 aa5.42□□□□□ -1.54
CCS1YMR038C RAI1P53063 387 aaKnown RBP5.42□□□□□ -1.54
CCS1YMR038C MRPS35P53292 345 aa5.42□□□□□ -1.54
CCS1YMR038C PBP1P53297 722 aaKnown RBP5.42□□□□□ -1.54
CCS1YMR038C ERP3Q12403 225 aa5.42□□□□□ -1.54
CCS1YMR038C FKS1P38631 1876 aaKnown RBP5.41□□□□□ -1.54
CCS1YMR038C PHO8P11491 566 aa5.41□□□□□ -1.54
CCS1YMR038C MAS2P11914 482 aa5.41□□□□□ -1.54
CCS1YMR038C EMC1P25574 760 aa5.41□□□□□ -1.54
CCS1YMR038C URK1P27515 501 aa5.41□□□□□ -1.54
CCS1YMR038C SYN8P31377 255 aa5.41□□□□□ -1.54
CCS1YMR038C STE13P33894 931 aa5.41□□□□□ -1.54
CCS1YMR038C TOD6P34219 525 aa5.41□□□□□ -1.54
CCS1YMR038C RRP8P38961 392 aaKnown RBP5.41□□□□□ -1.54
CCS1YMR038C OSW7P43611 510 aa5.41□□□□□ -1.54
CCS1YMR038C ALG2P43636 503 aa5.41□□□□□ -1.54
CCS1YMR038C MET12P46151 657 aa5.41□□□□□ -1.54
CCS1YMR038C RNH70P53331 553 aa5.41□□□□□ -1.54
CCS1YMR038C YGR283CP53336 341 aaPredicted RBP5.41□□□□□ -1.54
CCS1YMR038C SUE1Q06524 206 aa5.41□□□□□ -1.54
CCS1YMR038C RXT3Q07458 294 aa5.41□□□□□ -1.54
CCS1YMR038C TAH18Q12181 623 aa5.41□□□□□ -1.54
CCS1YMR038C TKL1P23254 680 aaKnown RBP5.4□□□□□ -1.54
CCS1YMR038C EMC3P36039 253 aa5.4□□□□□ -1.54
CCS1YMR038C MCR1P36060 302 aaKnown RBP5.4□□□□□ -1.54
CCS1YMR038C NDT80P38830 627 aa5.4□□□□□ -1.54
CCS1YMR038C HDA1P53973 706 aa5.4□□□□□ -1.54
CCS1YMR038C RPS15Q01855 142 aaKnown RBP5.4□□□□□ -1.54
CCS1YMR038C SKY1Q03656 742 aa5.4□□□□□ -1.54
CCS1YMR038C YAP6Q03935 383 aa5.4□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms