RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM2	YKR056W	STT3	P39007	718 aa	Known RBP	2.99	□□□□□ -1.93
TRM2	YKR056W	YEL076C	P39971	216 aa		2.99	□□□□□ -1.93
TRM2	YKR056W	OYE3	P41816	400 aa	Predicted RBP	2.99	□□□□□ -1.93
TRM2	YKR056W	YFL052W	P43551	465 aa		2.99	□□□□□ -1.93
TRM2	YKR056W	YGR250C	P53316	781 aa	Known RBP	2.99	□□□□□ -1.93
TRM2	YKR056W	ARE2	P53629	642 aa	Known RBP	2.99	□□□□□ -1.93
TRM2	YKR056W	YMR018W	Q04364	514 aa		2.99	□□□□□ -1.93
TRM2	YKR056W	VID22	Q05934	901 aa		2.99	□□□□□ -1.93
TRM2	YKR056W	STP4	Q07351	490 aa		2.99	□□□□□ -1.93
TRM2	YKR056W	MCH5	Q08777	521 aa		2.99	□□□□□ -1.93
TRM2	YKR056W	RVB2	Q12464	471 aa	Known RBP	2.99	□□□□□ -1.93
TRM2	YKR056W	PRC1	P00729	532 aa		2.99	□□□□□ -1.93
TRM2	YKR056W	DAL5	P15365	543 aa		2.99	□□□□□ -1.93
TRM2	YKR056W	UBC1	P21734	215 aa	Known RBP	2.99	□□□□□ -1.93
TRM2	YKR056W	NGG1	P32494	702 aa		2.99	□□□□□ -1.93
TRM2	YKR056W	CBF2	P32504	956 aa		2.99	□□□□□ -1.93
TRM2	YKR056W	SWI3	P32591	825 aa		2.99	□□□□□ -1.93
TRM2	YKR056W	PEX7	P39108	375 aa		2.99	□□□□□ -1.93
TRM2	YKR056W	YEL068C	P39977	110 aa		2.99	□□□□□ -1.93
TRM2	YKR056W	YER010C	P40011	234 aa		2.99	□□□□□ -1.93
TRM2	YKR056W	RAD26	P40352	1085 aa		2.99	□□□□□ -1.93
TRM2	YKR056W	RMD8	P43620	662 aa		2.99	□□□□□ -1.93
TRM2	YKR056W	MNT2	P53059	558 aa		2.99	□□□□□ -1.93
TRM2	YKR056W	HOL1	P53389	586 aa		2.99	□□□□□ -1.93
TRM2	YKR056W	TIM10	P87108	93 aa		2.99	□□□□□ -1.93
TRM2	YKR056W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	not detected
TRM2	YKR056W	MRPL13	Q02204	264 aa		2.99	□□□□□ -1.93
TRM2	YKR056W	RCR2	Q03446	210 aa	Known RBP	2.99	□□□□□ -1.93
TRM2	YKR056W	RIB2	Q12362	591 aa	Known RBP	2.99	□□□□□ -1.93
TRM2	YKR056W	HIF1	Q12373	385 aa		2.99	□□□□□ -1.93
TRM2	YKR056W	PGA3	Q12746	312 aa	Known RBP	2.99	□□□□□ -1.93
TRM2	YKR056W	VAS1	P07806	1104 aa	Known RBP	2.98	□□□□□ -1.93
TRM2	YKR056W	IMG2	P25642	146 aa	Predicted RBP	2.98	□□□□□ -1.93
TRM2	YKR056W	RPC82	P32349	654 aa		2.98	□□□□□ -1.93
TRM2	YKR056W	TYE7	P33122	291 aa	Predicted RBP	2.98	□□□□□ -1.93
TRM2	YKR056W	SAP190	P36123	1033 aa		2.98	□□□□□ -1.93
TRM2	YKR056W	ESL2	P36168	1195 aa		2.98	□□□□□ -1.93
TRM2	YKR056W	UBS1	P38290	277 aa		2.98	□□□□□ -1.93
TRM2	YKR056W	SAW1	P39735	261 aa		2.98	□□□□□ -1.93
TRM2	YKR056W	IRC6	P43615	237 aa		2.98	□□□□□ -1.93
TRM2	YKR056W	RBG2	P53295	368 aa	Known RBP	2.98	□□□□□ -1.93
TRM2	YKR056W	YNR071C	P53757	342 aa		2.98	□□□□□ -1.93
TRM2	YKR056W	SPN1	Q06505	410 aa	Predicted RBP	2.98	□□□□□ -1.93
TRM2	YKR056W	PSR1	Q07800	427 aa		2.98	□□□□□ -1.93
TRM2	YKR056W	VHS3	Q08438	674 aa		2.98	□□□□□ -1.93
TRM2	YKR056W	OSW2	Q12202	724 aa		2.98	□□□□□ -1.93
TRM2	YKR056W	SVS1	Q12254	260 aa		2.98	□□□□□ -1.93
TRM2	YKR056W	ENT1	Q12518	454 aa		2.98	□□□□□ -1.93
TRM2	YKR056W	RPS17A	P02407	136 aa	Known RBP	2.97	□□□□□ -1.93
TRM2	YKR056W	NUC1	P08466	329 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	RPS17B	P14127	136 aa	Known RBP	2.97	□□□□□ -1.93
TRM2	YKR056W	CMP2	P14747	604 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	2.97	□□□□□ -1.93	not detected
TRM2	YKR056W	CBP3	P21560	335 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	SWI4	P25302	1093 aa	Known RBP	2.97	□□□□□ -1.93
TRM2	YKR056W	FRD1	P32614	470 aa	Known RBP	2.97	□□□□□ -1.93
TRM2	YKR056W	MTC7	P32633	139 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	YPT7	P32939	208 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	SLC1	P33333	303 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	TFC3	P34111	1160 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	NOP4	P37838	685 aa	Known RBP	2.97	□□□□□ -1.93
TRM2	YKR056W	CTF18	P49956	741 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	RAI1	P53063	387 aa	Known RBP	2.97	□□□□□ -1.93
TRM2	YKR056W	DUS1	P53759	423 aa	Known RBP	2.97	□□□□□ -1.93
TRM2	YKR056W	UTP21	Q06078	939 aa	Predicted RBP	2.97	□□□□□ -1.93
TRM2	YKR056W	PSF3	Q12146	194 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	DBP10	Q12389	995 aa	Known RBP	2.97	□□□□□ -1.93
TRM2	YKR056W	PNS1	Q12412	539 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	CDC16	P09798	840 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	MRP7	P12687	371 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	POL3	P15436	1097 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	CLB4	P24871	460 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	CMK1	P27466	446 aa	Known RBP	2.97	□□□□□ -1.93
TRM2	YKR056W	VMA8	P32610	256 aa	Known RBP	2.97	□□□□□ -1.93
TRM2	YKR056W	RPS0A	P32905	252 aa	Known RBP	2.97	□□□□□ -1.93
TRM2	YKR056W	SDS22	P36047	338 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	POA1	P38218	177 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	NPR2	P39923	615 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	KAP123	P40069	1113 aa	Known RBP	2.97	□□□□□ -1.93
TRM2	YKR056W	GID8	P40208	455 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	GPD2	P41911	440 aa	Known RBP	2.97	□□□□□ -1.93
TRM2	YKR056W	CBK1	P53894	756 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	SSL2	Q00578	843 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	SXM1	Q04175	944 aa	Known RBP	2.97	□□□□□ -1.93
TRM2	YKR056W	IRC3	Q06683	689 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	CDA1	Q06702	301 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	SCM3	Q12334	223 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	PCD1	Q12524	340 aa		2.97	□□□□□ -1.93
TRM2	YKR056W	RPS9A	O13516	197 aa	Known RBP	2.96	□□□□□ -1.94
TRM2	YKR056W	SEM1	O94742	89 aa		2.96	□□□□□ -1.94
TRM2	YKR056W	LEU2	P04173	364 aa	Predicted RBP	2.96	□□□□□ -1.94
TRM2	YKR056W	NAT1	P12945	854 aa	Known RBP	2.96	□□□□□ -1.94
TRM2	YKR056W	SIR1	P21691	654 aa		2.96	□□□□□ -1.94
TRM2	YKR056W	RAD16	P31244	790 aa		2.96	□□□□□ -1.94
TRM2	YKR056W	YIL108W	P40483	696 aa	Known RBP	2.96	□□□□□ -1.94
TRM2	YKR056W	SET2	P46995	733 aa	Known RBP	2.96	□□□□□ -1.94
TRM2	YKR056W	RIM8	P53179	542 aa		2.96	□□□□□ -1.94
TRM2	YKR056W	MRPL19	P53875	158 aa		2.96	□□□□□ -1.94
TRM2	YKR056W	ACS1	Q01574	713 aa		2.96	□□□□□ -1.94
TRM2	YKR056W	MEH1	Q02205	184 aa		2.96	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms