RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C ROT1Q03691 256 aa2.9□□□□□ -1.95
PRE4YFR050C VPS64Q03944 604 aa2.9□□□□□ -1.95
PRE4YFR050C VTS1Q08831 523 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
PRE4YFR050C CDC53Q12018 815 aaKnown RBP2.9□□□□□ -1.95
PRE4YFR050C URA2P07259 2214 aaKnown RBP2.89□□□□□ -1.95
PRE4YFR050C SOD2P00447 233 aa2.89□□□□□ -1.95
PRE4YFR050C GAL10P04397 699 aa2.89□□□□□ -1.95
PRE4YFR050C MCM4P30665 933 aaKnown RBP2.89□□□□□ -1.95
PRE4YFR050C TCD2P36101 447 aaKnown RBP2.89□□□□□ -1.95
PRE4YFR050C VBA5P36172 582 aa2.89□□□□□ -1.95
PRE4YFR050C LAM1P38851 1228 aa2.89□□□□□ -1.95
PRE4YFR050C MBP1P39678 833 aa2.89□□□□□ -1.95
PRE4YFR050C SAH1P39954 449 aaKnown RBP2.89□□□□□ -1.95
PRE4YFR050C SIP5P40210 489 aaKnown RBP2.89□□□□□ -1.95
PRE4YFR050C CSM2P40465 213 aa2.89□□□□□ -1.95
PRE4YFR050C YFH7P43591 353 aa2.89□□□□□ -1.95
PRE4YFR050C SPT20P50875 604 aa2.89□□□□□ -1.95
PRE4YFR050C RIM8P53179 542 aa2.89□□□□□ -1.95
PRE4YFR050C TPO2P53283 614 aa2.89□□□□□ -1.95
PRE4YFR050C SRP1Q02821 542 aaKnown RBP2.89□□□□□ -1.95
PRE4YFR050C ENT2Q05785 613 aa2.89□□□□□ -1.95
PRE4YFR050C TDA5Q06417 326 aaKnown RBP2.89□□□□□ -1.95
PRE4YFR050C ENA1P13587 1091 aa2.88□□□□□ -1.95
PRE4YFR050C PRP6P19735 899 aaPredicted RBP2.88□□□□□ -1.95
PRE4YFR050C TOD6P34219 525 aa2.88□□□□□ -1.95
PRE4YFR050C MRP8P35719 219 aa2.88□□□□□ -1.95
PRE4YFR050C YKL069WP36088 180 aa2.88□□□□□ -1.95
PRE4YFR050C ABZ1P37254 787 aaPredicted RBP2.88□□□□□ -1.95
PRE4YFR050C RFC1P38630 861 aaKnown RBP2.88□□□□□ -1.95
PRE4YFR050C BUD16P39988 312 aa2.88□□□□□ -1.95
PRE4YFR050C MMF1P40185 145 aaKnown RBP2.88□□□□□ -1.95
PRE4YFR050C GTF1P53260 183 aaPredicted RBP2.88□□□□□ -1.95
PRE4YFR050C PBP1P53297 722 aaKnown RBP2.88□□□□□ -1.95
PRE4YFR050C ENA2Q01896 1091 aa2.88□□□□□ -1.95
PRE4YFR050C SHE9Q04172 456 aa2.88□□□□□ -1.95
PRE4YFR050C DUS3Q06053 668 aaKnown RBP2.88□□□□□ -1.95
PRE4YFR050C PCL8Q08966 492 aa2.88□□□□□ -1.95
PRE4YFR050C YPL277CQ08989 487 aa2.88□□□□□ -1.95
PRE4YFR050C OSW2Q12202 724 aa2.88□□□□□ -1.95
PRE4YFR050C RIB2Q12362 591 aaKnown RBP2.88□□□□□ -1.95
PRE4YFR050C ENA5Q12691 1091 aa2.88□□□□□ -1.95
PRE4YFR050C RPS9AO13516 197 aaKnown RBP2.87□□□□□ -1.95
PRE4YFR050C TFB1P32776 642 aa2.87□□□□□ -1.95
PRE4YFR050C SHP1P34223 423 aa2.87□□□□□ -1.95
PRE4YFR050C GCS1P35197 352 aa2.87□□□□□ -1.95
PRE4YFR050C HFM1P51979 1187 aa2.87□□□□□ -1.95
PRE4YFR050C SUR7P54003 302 aa2.87□□□□□ -1.95
PRE4YFR050C GCN5Q03330 439 aa2.87□□□□□ -1.95
PRE4YFR050C HRQ1Q05549 1077 aa2.87□□□□□ -1.95
PRE4YFR050C YPR196WQ06595 470 aa2.87□□□□□ -1.95
PRE4YFR050C YDR306CQ06640 478 aa2.87□□□□□ -1.95
PRE4YFR050C RXT3Q07458 294 aa2.87□□□□□ -1.95
PRE4YFR050C YDL124WQ07551 312 aaKnown RBP2.87□□□□□ -1.95
PRE4YFR050C PSF3Q12146 194 aa2.87□□□□□ -1.95
PRE4YFR050C YLR358CO13565 187 aa2.86□□□□□ -1.95
PRE4YFR050C SNF3P10870 884 aa2.86□□□□□ -1.95
PRE4YFR050C AAR2P32357 355 aaPredicted RBP2.86□□□□□ -1.95
PRE4YFR050C TFC4P33339 1025 aa2.86□□□□□ -1.95
PRE4YFR050C PBY1P38254 753 aa2.86□□□□□ -1.95
PRE4YFR050C MEF2P39677 819 aa2.86□□□□□ -1.95
PRE4YFR050C SPF1P39986 1215 aaKnown RBP2.86□□□□□ -1.95
PRE4YFR050C ZRG8P40021 1076 aa2.86□□□□□ -1.95
PRE4YFR050C IRR1P40541 1150 aa2.86□□□□□ -1.95
PRE4YFR050C MPP10P47083 593 aaKnown RBP2.86□□□□□ -1.95
PRE4YFR050C SIZ1Q04195 904 aa2.86□□□□□ -1.95
PRE4YFR050C WHI4Q07655 649 aaKnown RBP2.86□□□□□ -1.95
PRE4YFR050C MDM38Q08179 573 aa2.86□□□□□ -1.95
PRE4YFR050C GPB1Q08886 897 aa2.86□□□□□ -1.95
PRE4YFR050C SSF2Q12153 453 aaPredicted RBP2.86□□□□□ -1.95
PRE4YFR050C YLL058WQ12198 575 aa2.86□□□□□ -1.95
PRE4YFR050C CET1O13297 549 aaPredicted RBP2.85□□□□□ -1.95
PRE4YFR050C SRM1P21827 482 aa2.85□□□□□ -1.95
PRE4YFR050C YBR184WP38299 523 aa2.85□□□□□ -1.95
PRE4YFR050C PSP2P50109 593 aaKnown RBP2.85□□□□□ -1.95
PRE4YFR050C YNL092WP53934 400 aa2.85□□□□□ -1.95
PRE4YFR050C ARP4P80428 489 aa2.85□□□□□ -1.95
PRE4YFR050C NAN1Q02931 896 aaKnown RBP2.85□□□□□ -1.95
PRE4YFR050C PLB2Q03674 706 aa2.85□□□□□ -1.95
PRE4YFR050C SPO75Q07798 868 aa2.85□□□□□ -1.95
PRE4YFR050C IKI3Q06706 1349 aaKnown RBP2.85□□□□□ -1.95
PRE4YFR050C ADE8P04161 214 aa2.84□□□□□ -1.95
PRE4YFR050C RPP2AP05319 106 aaKnown RBP2.84□□□□□ -1.95
PRE4YFR050C SAM1P10659 382 aaKnown RBP2.84□□□□□ -1.95
PRE4YFR050C FUN30P31380 1131 aa2.84□□□□□ -1.95
PRE4YFR050C CDC12P32468 407 aaKnown RBP2.84□□□□□ -1.95
PRE4YFR050C SCT1P32784 759 aa2.84□□□□□ -1.95
PRE4YFR050C SRP101P32916 621 aa2.84□□□□□ -1.95
PRE4YFR050C THI80P35202 319 aa2.84□□□□□ -1.95
PRE4YFR050C YAP1801P38856 637 aa2.84□□□□□ -1.95
PRE4YFR050C MND2P40577 368 aa2.84□□□□□ -1.95
PRE4YFR050C YPS6P40583 537 aa2.84□□□□□ -1.95
PRE4YFR050C GCV2P49095 1034 aa2.84□□□□□ -1.95
PRE4YFR050C YGR012WP53206 393 aa2.84□□□□□ -1.95
PRE4YFR050C LEE1Q02799 301 aaKnown RBP2.84□□□□□ -1.95
PRE4YFR050C SRT1Q03175 343 aa2.84□□□□□ -1.95
PRE4YFR050C PKH1Q03407 766 aa2.84□□□□□ -1.95
PRE4YFR050C YDR132CQ03900 495 aa2.84□□□□□ -1.95
PRE4YFR050C HEL2Q05580 639 aaKnown RBP2.84□□□□□ -1.95
PRE4YFR050C XYL2Q07993 356 aa2.84□□□□□ -1.95
PRE4YFR050C ESC8Q08119 714 aa2.84□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms