RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C UTP14Q04500 899 aaKnown RBP3.37□□□□□ -1.87
SMB1YER029C SWI6P09959 803 aa3.36□□□□□ -1.87
SMB1YER029C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
SMB1YER029C SFP1P32432 683 aa3.36□□□□□ -1.87
SMB1YER029C MSS1P32559 526 aaPredicted RBP3.36□□□□□ -1.87
SMB1YER029C YKU70P32807 602 aa3.36□□□□□ -1.87
SMB1YER029C BCS1P32839 456 aa3.36□□□□□ -1.87
SMB1YER029C RGT1P32862 1170 aa3.36□□□□□ -1.87
SMB1YER029C BNA3P47039 444 aaKnown RBP3.36□□□□□ -1.87
SMB1YER029C COX18P53239 316 aa3.36□□□□□ -1.87
SMB1YER029C ATG4P53867 494 aa3.36□□□□□ -1.87
SMB1YER029C MTQ2Q03920 221 aaPredicted RBP3.36□□□□□ -1.87
SMB1YER029C YPS7Q06325 596 aa3.36□□□□□ -1.87
SMB1YER029C USV1Q12132 391 aa3.36□□□□□ -1.87
SMB1YER029C RGT2Q12300 763 aa3.36□□□□□ -1.87
SMB1YER029C ZRT2Q12436 422 aa3.36□□□□□ -1.87
SMB1YER029C RPS21BQ3E754 87 aaKnown RBP3.36□□□□□ -1.87
SMB1YER029C VPS34P22543 875 aa3.35□□□□□ -1.87
SMB1YER029C PTP1P25044 335 aa3.35□□□□□ -1.87
SMB1YER029C PET127P32606 800 aa3.35□□□□□ -1.87
SMB1YER029C MAL31P38156 614 aa3.35□□□□□ -1.87
SMB1YER029C FPR3P38911 411 aaKnown RBP3.35□□□□□ -1.87
SMB1YER029C BDH2P39713 417 aa3.35□□□□□ -1.87
SMB1YER029C CCT5P40413 562 aaKnown RBP3.35□□□□□ -1.87
SMB1YER029C BIT61P47041 543 aa3.35□□□□□ -1.87
SMB1YER029C YNR029CP53729 429 aaKnown RBP3.35□□□□□ -1.87
SMB1YER029C DOS2P54858 310 aa3.35□□□□□ -1.87
SMB1YER029C YLR407WQ06070 228 aa3.35□□□□□ -1.87
SMB1YER029C ISA1Q07821 250 aaPredicted RBP3.35□□□□□ -1.87
SMB1YER029C THI73Q07904 523 aa3.35□□□□□ -1.87
SMB1YER029C CHS5Q12114 671 aaKnown RBP3.35□□□□□ -1.87
SMB1YER029C CLF1Q12309 687 aaPredicted RBP3.35□□□□□ -1.87
SMB1YER029C FRS1P15624 595 aaKnown RBP3.34□□□□□ -1.87
SMB1YER029C FEN2P25621 512 aaKnown RBP3.34□□□□□ -1.87
SMB1YER029C PRP19P32523 503 aaKnown RBP3.34□□□□□ -1.87
SMB1YER029C TYS1P36421 394 aaKnown RBP3.34□□□□□ -1.87
SMB1YER029C HXT6P39003 570 aaKnown RBP3.34□□□□□ -1.87
SMB1YER029C HXT7P39004 570 aa3.34□□□□□ -1.87
SMB1YER029C PIG2P40187 538 aa3.34□□□□□ -1.87
SMB1YER029C ARG2P40360 574 aa3.34□□□□□ -1.87
SMB1YER029C BPL1P48445 690 aaPredicted RBP3.34□□□□□ -1.87
SMB1YER029C RFX1P48743 811 aa3.34□□□□□ -1.87
SMB1YER029C MPS1P54199 764 aa3.34□□□□□ -1.87
SMB1YER029C GPD1Q00055 391 aaKnown RBP3.34□□□□□ -1.87
SMB1YER029C ECM9Q02202 377 aa3.34□□□□□ -1.87
SMB1YER029C UME1Q03010 460 aa3.34□□□□□ -1.87
SMB1YER029C POM34Q12445 299 aa3.34□□□□□ -1.87
SMB1YER029C ERG20P08524 352 aaKnown RBP3.33□□□□□ -1.88
SMB1YER029C PRP28P23394 588 aa3.33□□□□□ -1.88
SMB1YER029C OAF3P36023 863 aa3.33□□□□□ -1.88
SMB1YER029C TDA3P38758 523 aa3.33□□□□□ -1.88
SMB1YER029C LTP1P40347 161 aa3.33□□□□□ -1.88
SMB1YER029C GPP1P41277 250 aaKnown RBP3.33□□□□□ -1.88
SMB1YER029C NET1P47035 1189 aa3.33□□□□□ -1.88
SMB1YER029C MPS3P47069 682 aa3.33□□□□□ -1.88
SMB1YER029C YGR153WP48238 217 aa3.33□□□□□ -1.88
SMB1YER029C HLJ1P48353 224 aa3.33□□□□□ -1.88
SMB1YER029C STP4Q07351 490 aa3.33□□□□□ -1.88
SMB1YER029C VHS3Q08438 674 aa3.33□□□□□ -1.88
SMB1YER029C OSW1Q08692 278 aa3.33□□□□□ -1.88
SMB1YER029C HFI1Q12060 488 aa3.33□□□□□ -1.88
SMB1YER029C APM4Q99186 491 aa3.33□□□□□ -1.88
SMB1YER029C FUB1P25659 250 aa3.32□□□□□ -1.88
SMB1YER029C CTP1P38152 299 aa3.32□□□□□ -1.88
SMB1YER029C FAT1P38225 669 aa3.32□□□□□ -1.88
SMB1YER029C YHR097CP38809 366 aaKnown RBP3.32□□□□□ -1.88
SMB1YER029C OAF1P39720 1047 aaPredicted RBP3.32□□□□□ -1.88
SMB1YER029C PAC2P39937 518 aa3.32□□□□□ -1.88
SMB1YER029C MIT1P40002 666 aa3.32□□□□□ -1.88
SMB1YER029C YIL077CP40508 320 aa3.32□□□□□ -1.88
SMB1YER029C BUD8P41698 603 aa3.32□□□□□ -1.88
SMB1YER029C GZF3P42944 551 aaKnown RBP3.32□□□□□ -1.88
SMB1YER029C IES1P43579 692 aa3.32□□□□□ -1.88
SMB1YER029C PMT3P47190 753 aa3.32□□□□□ -1.88
SMB1YER029C SNF12P53628 566 aa3.32□□□□□ -1.88
SMB1YER029C NOP15P53927 220 aaPredicted RBP3.32□□□□□ -1.88
SMB1YER029C DIA2Q08496 732 aaPredicted RBP3.32□□□□□ -1.88
SMB1YER029C YGR161W-CQ3E744 92 aa3.32□□□□□ -1.88
SMB1YER029C NUP145P49687 1317 aa3.31□□□□□ -1.88
SMB1YER029C RPS17AP02407 136 aaKnown RBP3.31□□□□□ -1.88
SMB1YER029C RPS21AP0C0V8 87 aaKnown RBP3.31□□□□□ -1.88
SMB1YER029C RPS17BP14127 136 aaKnown RBP3.31□□□□□ -1.88
SMB1YER029C GLG1P36143 616 aa3.31□□□□□ -1.88
SMB1YER029C KHA1P40309 873 aa3.31□□□□□ -1.88
SMB1YER029C CTR1P49573 406 aa3.31□□□□□ -1.88
SMB1YER029C YGR151CP53287 111 aa3.31□□□□□ -1.88
SMB1YER029C YMR210WQ03649 449 aa3.31□□□□□ -1.88
SMB1YER029C YFT2Q06676 274 aa3.31□□□□□ -1.88
SMB1YER029C CDC26P14724 124 aa3.3□□□□□ -1.88
SMB1YER029C KIN82P25341 720 aa3.3□□□□□ -1.88
SMB1YER029C YKR075CP36155 307 aa3.3□□□□□ -1.88
SMB1YER029C COS111P38308 924 aa3.3□□□□□ -1.88
SMB1YER029C KSP1P38691 1029 aaKnown RBP3.3□□□□□ -1.88
SMB1YER029C MNN11P46985 422 aaKnown RBP3.3□□□□□ -1.88
SMB1YER029C SPO1P53541 631 aa3.3□□□□□ -1.88
SMB1YER029C TDA9Q04545 1251 aa3.3□□□□□ -1.88
SMB1YER029C YDL086WQ07505 273 aa3.3□□□□□ -1.88
SMB1YER029C IZH3Q07959 543 aa3.3□□□□□ -1.88
SMB1YER029C BMS1Q08965 1183 aaKnown RBP3.3□□□□□ -1.88
SMB1YER029C YTM1Q12024 460 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms