RNA–Protein interactions for RNA: YDR317W

HIM1, Transcript of Protein of unknown function involved in DNA repair, yeast

Gene HIM1, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HIM1	YDR317W	TRZ1	P36159	838 aa	Predicted RBP	5.31	□□□□□ -1.56
HIM1	YDR317W	SSZ1	P38788	538 aa	Known RBP	5.31	□□□□□ -1.56
HIM1	YDR317W	NUP60	P39705	539 aa		5.31	□□□□□ -1.56
HIM1	YDR317W	MGS1	P40151	587 aa		5.31	□□□□□ -1.56
HIM1	YDR317W	NOP9	P47077	666 aa	Known RBP	5.31	□□□□□ -1.56
HIM1	YDR317W	COX18	P53239	316 aa		5.31	□□□□□ -1.56
HIM1	YDR317W	CTK1	Q03957	528 aa	Known RBP	5.31	□□□□□ -1.56
HIM1	YDR317W	COG8	Q04632	607 aa		5.31	□□□□□ -1.56
HIM1	YDR317W	BNI1	P41832	1953 aa		5.31	□□□□□ -1.56
HIM1	YDR317W	SNQ2	P32568	1501 aa	Known RBP	5.3	□□□□□ -1.56
HIM1	YDR317W	UBS1	P38290	277 aa		5.3	□□□□□ -1.56
HIM1	YDR317W	CBR1	P38626	284 aa	Known RBP	5.3	□□□□□ -1.56
HIM1	YDR317W	NUG1	P40010	520 aa	Known RBP	5.3	□□□□□ -1.56
HIM1	YDR317W	QRI1	P43123	477 aa	Known RBP	5.3	□□□□□ -1.56
HIM1	YDR317W	GUD1	Q07729	489 aa		5.3	□□□□□ -1.56
HIM1	YDR317W	MLH3	Q12083	715 aa		5.3	□□□□□ -1.56
HIM1	YDR317W	SNT2	P53127	1403 aa		5.3	□□□□□ -1.56
HIM1	YDR317W	PYC1	P11154	1178 aa	Known RBP	5.29	□□□□□ -1.56
HIM1	YDR317W	PHO11	P35842	467 aa		5.29	□□□□□ -1.56
HIM1	YDR317W	APT2	P36973	181 aa		5.29	□□□□□ -1.56
HIM1	YDR317W	PHO12	P38693	467 aa		5.29	□□□□□ -1.56
HIM1	YDR317W	SET2	P46995	733 aa	Known RBP	5.29	□□□□□ -1.56
HIM1	YDR317W	YJR039W	P47107	1121 aa		5.29	□□□□□ -1.56
HIM1	YDR317W	YJR142W	P47173	342 aa		5.29	□□□□□ -1.56
HIM1	YDR317W	SDA1	P53313	767 aa	Known RBP	5.29	□□□□□ -1.56
HIM1	YDR317W	YKL033W-A	Q86ZR7	236 aa		5.29	□□□□□ -1.56
HIM1	YDR317W	AKL1	P38080	1108 aa	Known RBP	5.28	□□□□□ -1.56
HIM1	YDR317W	APN2	P38207	520 aa		5.28	□□□□□ -1.56
HIM1	YDR317W	YHR202W	P38887	602 aa		5.28	□□□□□ -1.56
HIM1	YDR317W	CCT7	P42943	550 aa	Known RBP	5.28	□□□□□ -1.56
HIM1	YDR317W	FHN1	P53279	174 aa		5.28	□□□□□ -1.56
HIM1	YDR317W	VPS36	Q06696	566 aa		5.28	□□□□□ -1.56
HIM1	YDR317W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.28	□□□□□ -1.56	not detected
HIM1	YDR317W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.27	□□□□□ -1.57	not detected
HIM1	YDR317W	REV7	P38927	245 aa		5.27	□□□□□ -1.57
HIM1	YDR317W	YJR096W	P47137	282 aa		5.27	□□□□□ -1.57
HIM1	YDR317W	SMX3	P54999	86 aa	Predicted RBP	5.27	□□□□□ -1.57
HIM1	YDR317W	REC102	Q02721	264 aa		5.27	□□□□□ -1.57
HIM1	YDR317W	THI22	Q06490	572 aa		5.27	□□□□□ -1.57
HIM1	YDR317W	ISA1	Q07821	250 aa	Predicted RBP	5.27	□□□□□ -1.57
HIM1	YDR317W	IMG2	P25642	146 aa	Predicted RBP	5.26	□□□□□ -1.57
HIM1	YDR317W	TDP1	P38319	544 aa		5.26	□□□□□ -1.57
HIM1	YDR317W	FPR3	P38911	411 aa	Known RBP	5.26	□□□□□ -1.57
HIM1	YDR317W	RSC8	P43609	557 aa	Known RBP	5.26	□□□□□ -1.57
HIM1	YDR317W	HLJ1	P48353	224 aa		5.26	□□□□□ -1.57
HIM1	YDR317W	SSL2	Q00578	843 aa		5.26	□□□□□ -1.57
HIM1	YDR317W	NUP170	P38181	1502 aa		5.26	□□□□□ -1.57
HIM1	YDR317W	MLP2	P40457	1679 aa		5.25	□□□□□ -1.57
HIM1	YDR317W	THR1	P17423	357 aa	Known RBP	5.25	□□□□□ -1.57
HIM1	YDR317W	PEX1	P24004	1043 aa		5.25	□□□□□ -1.57
HIM1	YDR317W	SET3	P36124	751 aa		5.25	□□□□□ -1.57
HIM1	YDR317W	BEM4	P39011	633 aa		5.25	□□□□□ -1.57
HIM1	YDR317W	STU2	P46675	888 aa		5.25	□□□□□ -1.57
HIM1	YDR317W	RCR2	Q03446	210 aa	Known RBP	5.25	□□□□□ -1.57
HIM1	YDR317W	USV1	Q12132	391 aa		5.25	□□□□□ -1.57
HIM1	YDR317W	YGR161W-C	Q3E744	92 aa		5.25	□□□□□ -1.57
HIM1	YDR317W	ULS1	Q08562	1619 aa		5.25	□□□□□ -1.57
HIM1	YDR317W	CRP1	P38845	465 aa	Known RBP	5.24	□□□□□ -1.57
HIM1	YDR317W	NDC80	P40460	691 aa		5.24	□□□□□ -1.57
HIM1	YDR317W	BFA1	P47113	574 aa		5.24	□□□□□ -1.57
HIM1	YDR317W	KIN3	P22209	435 aa		5.23	□□□□□ -1.57
HIM1	YDR317W	BCS1	P32839	456 aa		5.23	□□□□□ -1.57
HIM1	YDR317W	VPS73	P53142	486 aa	Known RBP	5.23	□□□□□ -1.57
HIM1	YDR317W	THI73	Q07904	523 aa		5.23	□□□□□ -1.57
HIM1	YDR317W	ZRT2	Q12436	422 aa		5.23	□□□□□ -1.57
HIM1	YDR317W	RPS21B	Q3E754	87 aa	Known RBP	5.23	□□□□□ -1.57
HIM1	YDR317W	SPO14	P36126	1683 aa		5.23	□□□□□ -1.57
HIM1	YDR317W	NUP157	P40064	1391 aa	Known RBP	5.22	□□□□□ -1.57
HIM1	YDR317W	PRP19	P32523	503 aa	Known RBP	5.22	□□□□□ -1.57
HIM1	YDR317W	SEC6	P32844	805 aa		5.22	□□□□□ -1.57
HIM1	YDR317W	TYS1	P36421	394 aa	Known RBP	5.22	□□□□□ -1.57
HIM1	YDR317W	YJL206C	P39529	758 aa		5.22	□□□□□ -1.57
HIM1	YDR317W	TAH11	P47112	604 aa		5.22	□□□□□ -1.57
HIM1	YDR317W	GPG1	P53130	126 aa		5.22	□□□□□ -1.57
HIM1	YDR317W	YAP1802	P53309	568 aa		5.22	□□□□□ -1.57
HIM1	YDR317W	GPD1	Q00055	391 aa	Known RBP	5.22	□□□□□ -1.57
HIM1	YDR317W	YLR407W	Q06070	228 aa		5.22	□□□□□ -1.57
HIM1	YDR317W	YPS7	Q06325	596 aa		5.22	□□□□□ -1.57
HIM1	YDR317W	PDR12	Q02785	1511 aa		5.22	□□□□□ -1.57
HIM1	YDR317W	PDR15	Q04182	1529 aa	Known RBP	5.22	□□□□□ -1.57
HIM1	YDR317W	FEN2	P25621	512 aa	Known RBP	5.21	□□□□□ -1.58
HIM1	YDR317W	EMP70	P32802	667 aa		5.21	□□□□□ -1.58
HIM1	YDR317W	YKU70	P32807	602 aa		5.21	□□□□□ -1.58
HIM1	YDR317W	YPT7	P32939	208 aa		5.21	□□□□□ -1.58
HIM1	YDR317W	YKR075C	P36155	307 aa		5.21	□□□□□ -1.58
HIM1	YDR317W	MAL31	P38156	614 aa		5.21	□□□□□ -1.58
HIM1	YDR317W	TDA3	P38758	523 aa		5.21	□□□□□ -1.58
HIM1	YDR317W	CKB2	P38930	258 aa		5.21	□□□□□ -1.58
HIM1	YDR317W	RFX1	P48743	811 aa		5.21	□□□□□ -1.58
HIM1	YDR317W	TAF3	Q12297	353 aa		5.21	□□□□□ -1.58
HIM1	YDR317W	IQG1	Q12280	1495 aa		5.2	□□□□□ -1.58
HIM1	YDR317W	BUD3	P25558	1636 aa		5.2	□□□□□ -1.58
HIM1	YDR317W	BNR1	P40450	1375 aa		5.2	□□□□□ -1.58
HIM1	YDR317W	BIT2	P38346	545 aa		5.2	□□□□□ -1.58
HIM1	YDR317W	YIL077C	P40508	320 aa		5.2	□□□□□ -1.58
HIM1	YDR317W	RET2	P43621	546 aa		5.2	□□□□□ -1.58
HIM1	YDR317W	YNR029C	P53729	429 aa	Known RBP	5.2	□□□□□ -1.58
HIM1	YDR317W	MTQ2	Q03920	221 aa	Predicted RBP	5.2	□□□□□ -1.58
HIM1	YDR317W	VHS3	Q08438	674 aa		5.2	□□□□□ -1.58
HIM1	YDR317W	PDR10	P51533	1564 aa		5.2	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms