RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W TUB1P09733 447 aaKnown RBP3.52□□□□□ -1.85
SSF2YDR312W ILV6P25605 309 aaKnown RBP3.52□□□□□ -1.85
SSF2YDR312W GLG1P36143 616 aa3.52□□□□□ -1.85
SSF2YDR312W APN2P38207 520 aa3.52□□□□□ -1.85
SSF2YDR312W UBS1P38290 277 aa3.52□□□□□ -1.85
SSF2YDR312W TDA3P38758 523 aa3.52□□□□□ -1.85
SSF2YDR312W RIX1P38883 763 aaPredicted RBP3.52□□□□□ -1.85
SSF2YDR312W YHR202WP38887 602 aa3.52□□□□□ -1.85
SSF2YDR312W NUG1P40010 520 aaKnown RBP3.52□□□□□ -1.85
SSF2YDR312W YNL195CP40168 261 aa3.52□□□□□ -1.85
SSF2YDR312W CTR1P49573 406 aa3.52□□□□□ -1.85
SSF2YDR312W YGR237CP50089 785 aa3.52□□□□□ -1.85
SSF2YDR312W MLH3Q12083 715 aa3.52□□□□□ -1.85
SSF2YDR312W ZRT2Q12436 422 aa3.52□□□□□ -1.85
SSF2YDR312W DRS2P39524 1355 aa3.52□□□□□ -1.85
SSF2YDR312W PEX1P24004 1043 aa3.51□□□□□ -1.85
SSF2YDR312W PEX2P32800 271 aa3.51□□□□□ -1.85
SSF2YDR312W BEM4P39011 633 aa3.51□□□□□ -1.85
SSF2YDR312W UBP12P39538 1254 aa3.51□□□□□ -1.85
SSF2YDR312W BDH2P39713 417 aa3.51□□□□□ -1.85
SSF2YDR312W GPP1P41277 250 aaKnown RBP3.51□□□□□ -1.85
SSF2YDR312W RET2P43621 546 aa3.51□□□□□ -1.85
SSF2YDR312W GPD1Q00055 391 aaKnown RBP3.51□□□□□ -1.85
SSF2YDR312W CLF1Q12309 687 aaPredicted RBP3.51□□□□□ -1.85
SSF2YDR312W THR1P17423 357 aaKnown RBP3.51□□□□□ -1.85
SSF2YDR312W ADY2P25613 283 aa3.51□□□□□ -1.85
SSF2YDR312W EMP70P32802 667 aa3.51□□□□□ -1.85
SSF2YDR312W FLO10P36170 1169 aa3.51□□□□□ -1.85
SSF2YDR312W MAL31P38156 614 aa3.51□□□□□ -1.85
SSF2YDR312W CCT5P40413 562 aaKnown RBP3.51□□□□□ -1.85
SSF2YDR312W NOP9P47077 666 aaKnown RBP3.51□□□□□ -1.85
SSF2YDR312W YGR153WP48238 217 aa3.51□□□□□ -1.85
SSF2YDR312W COX18P53239 316 aa3.51□□□□□ -1.85
SSF2YDR312W APM1Q00776 475 aaPredicted RBP3.51□□□□□ -1.85
SSF2YDR312W ECM9Q02202 377 aa3.51□□□□□ -1.85
SSF2YDR312W ARO10Q06408 635 aa3.51□□□□□ -1.85
SSF2YDR312W ISA1Q07821 250 aaPredicted RBP3.51□□□□□ -1.85
SSF2YDR312W FAP7Q12055 197 aaPredicted RBP3.51□□□□□ -1.85
SSF2YDR312W RPS21BQ3E754 87 aaKnown RBP3.51□□□□□ -1.85
SSF2YDR312W ECM3Q99252 613 aa3.51□□□□□ -1.85
SSF2YDR312W IMG2P25642 146 aaPredicted RBP3.5□□□□□ -1.85
SSF2YDR312W GRX4P32642 244 aa3.5□□□□□ -1.85
SSF2YDR312W HXT6P39003 570 aaKnown RBP3.5□□□□□ -1.85
SSF2YDR312W HXT7P39004 570 aa3.5□□□□□ -1.85
SSF2YDR312W OAF1P39720 1047 aaPredicted RBP3.5□□□□□ -1.85
SSF2YDR312W YEN1P40028 759 aa3.5□□□□□ -1.85
SSF2YDR312W GZF3P42944 551 aaKnown RBP3.5□□□□□ -1.85
SSF2YDR312W RSC8P43609 557 aaKnown RBP3.5□□□□□ -1.85
SSF2YDR312W IMO32P53219 342 aa3.5□□□□□ -1.85
SSF2YDR312W HFD1Q04458 532 aa3.5□□□□□ -1.85
SSF2YDR312W DIA2Q08496 732 aaPredicted RBP3.5□□□□□ -1.85
SSF2YDR312W YTM1Q12024 460 aaPredicted RBP3.5□□□□□ -1.85
SSF2YDR312W USV1Q12132 391 aa3.5□□□□□ -1.85
SSF2YDR312W RPN13O13563 156 aa3.49□□□□□ -1.85
SSF2YDR312W SPO11P23179 398 aa3.49□□□□□ -1.85
SSF2YDR312W YKR075CP36155 307 aa3.49□□□□□ -1.85
SSF2YDR312W YEL020CP39994 560 aa3.49□□□□□ -1.85
SSF2YDR312W YGL081WP53156 320 aa3.49□□□□□ -1.85
SSF2YDR312W YLR407WQ06070 228 aa3.49□□□□□ -1.85
SSF2YDR312W THI22Q06490 572 aa3.49□□□□□ -1.85
SSF2YDR312W VPS36Q06696 566 aa3.49□□□□□ -1.85
SSF2YDR312W RKR1Q04781 1562 aa3.48□□□□□ -1.85
SSF2YDR312W IRC20Q06554 1556 aa3.48□□□□□ -1.85
SSF2YDR312W SWI6P09959 803 aa3.48□□□□□ -1.85
SSF2YDR312W RPS21AP0C0V8 87 aaKnown RBP3.48□□□□□ -1.85
SSF2YDR312W PRP28P23394 588 aa3.48□□□□□ -1.85
SSF2YDR312W TSR4P25040 408 aa3.48□□□□□ -1.85
SSF2YDR312W YKU70P32807 602 aa3.48□□□□□ -1.85
SSF2YDR312W BCS1P32839 456 aa3.48□□□□□ -1.85
SSF2YDR312W SET3P36124 751 aa3.48□□□□□ -1.85
SSF2YDR312W BIT2P38346 545 aa3.48□□□□□ -1.85
SSF2YDR312W MNN11P46985 422 aaKnown RBP3.48□□□□□ -1.85
SSF2YDR312W BFA1P47113 574 aa3.48□□□□□ -1.85
SSF2YDR312W RCR2Q03446 210 aaKnown RBP3.48□□□□□ -1.85
SSF2YDR312W YMR210WQ03649 449 aa3.48□□□□□ -1.85
SSF2YDR312W COQ11Q05892 277 aa3.48□□□□□ -1.85
SSF2YDR312W YPS7Q06325 596 aa3.48□□□□□ -1.85
SSF2YDR312W VHS3Q08438 674 aa3.48□□□□□ -1.85
SSF2YDR312W PAN1P32521 1480 aa3.47□□□□□ -1.85
SSF2YDR312W YPK9Q12697 1472 aa3.47□□□□□ -1.85
SSF2YDR312W FUB1P25659 250 aa3.47□□□□□ -1.85
SSF2YDR312W SEC65P29478 273 aa3.47□□□□□ -1.85
SSF2YDR312W SEC6P32844 805 aa3.47□□□□□ -1.85
SSF2YDR312W YPT7P32939 208 aa3.47□□□□□ -1.85
SSF2YDR312W OAF3P36023 863 aa3.47□□□□□ -1.85
SSF2YDR312W FAT1P38225 669 aa3.47□□□□□ -1.85
SSF2YDR312W PIG2P40187 538 aa3.47□□□□□ -1.85
SSF2YDR312W YHM2Q04013 314 aa3.47□□□□□ -1.85
SSF2YDR312W HFI1Q12060 488 aa3.47□□□□□ -1.85
SSF2YDR312W YNL162W-AQ3E7A8 72 aa3.47□□□□□ -1.85
SSF2YDR312W FRS1P15624 595 aaKnown RBP3.46□□□□□ -1.86
SSF2YDR312W DAL3P32459 195 aa3.46□□□□□ -1.86
SSF2YDR312W PET127P32606 800 aa3.46□□□□□ -1.86
SSF2YDR312W GMH1P36125 273 aa3.46□□□□□ -1.86
SSF2YDR312W YGR151CP53287 111 aa3.46□□□□□ -1.86
SSF2YDR312W NOP15P53927 220 aaPredicted RBP3.46□□□□□ -1.86
SSF2YDR312W CHS5Q12114 671 aaKnown RBP3.46□□□□□ -1.86
SSF2YDR312W ESC1Q03661 1658 aaKnown RBP3.46□□□□□ -1.86
SSF2YDR312W ERG20P08524 352 aaKnown RBP3.45□□□□□ -1.86
SSF2YDR312W GLN4P13188 809 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms