RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	DON1	Q05610	365 aa		5	□□□□□ -1.61
SUP35	YDR172W	RGA2	Q06407	1009 aa		5	□□□□□ -1.61
SUP35	YDR172W	GPI13	Q07830	1017 aa		5	□□□□□ -1.61
SUP35	YDR172W	TY3A-G	Q12173	290 aa		5	□□□□□ -1.61
SUP35	YDR172W	TY3A-I	Q99219	290 aa		5	□□□□□ -1.61
SUP35	YDR172W	YLR462W	O13556	202 aa		5	□□□□□ -1.61
SUP35	YDR172W	CDC33	P07260	213 aa	Known RBP	5	□□□□□ -1.61
SUP35	YDR172W	PRP9	P19736	530 aa	Known RBP	5	□□□□□ -1.61
SUP35	YDR172W	MSN1	P22148	382 aa		5	□□□□□ -1.61
SUP35	YDR172W	NFU1	P32860	256 aa		5	□□□□□ -1.61
SUP35	YDR172W	TFC4	P33339	1025 aa		5	□□□□□ -1.61
SUP35	YDR172W	BLI1	P35727	113 aa		5	□□□□□ -1.61
SUP35	YDR172W	DBP7	P36120	742 aa	Known RBP	5	□□□□□ -1.61
SUP35	YDR172W	APE3	P37302	537 aa	Known RBP	5	□□□□□ -1.61
SUP35	YDR172W	NCL1	P38205	684 aa	Known RBP	5	□□□□□ -1.61
SUP35	YDR172W	YHL049C	P38722	271 aa		5	□□□□□ -1.61
SUP35	YDR172W	YEL075C	P39972	122 aa		5	□□□□□ -1.61
SUP35	YDR172W	YER189W	P40104	122 aa		5	□□□□□ -1.61
SUP35	YDR172W	YFL064C	P43540	174 aa		5	□□□□□ -1.61
SUP35	YDR172W	RPC17	P47076	161 aa		5	□□□□□ -1.61
SUP35	YDR172W	ORC5	P50874	479 aa		5	□□□□□ -1.61
SUP35	YDR172W	SUT1	P53032	299 aa	Known RBP	5	□□□□□ -1.61
SUP35	YDR172W	RIM8	P53179	542 aa		5	□□□□□ -1.61
SUP35	YDR172W	YMR321C	Q04898	105 aa		5	□□□□□ -1.61
SUP35	YDR172W	COQ9	Q05779	260 aa		5	□□□□□ -1.61
SUP35	YDR172W	IES4	Q08561	116 aa		5	□□□□□ -1.61
SUP35	YDR172W	APL5	Q08951	932 aa	Known RBP	5	□□□□□ -1.61
SUP35	YDR172W	AIM41	Q12032	185 aa		5	□□□□□ -1.61
SUP35	YDR172W	YLL058W	Q12198	575 aa		5	□□□□□ -1.61
SUP35	YDR172W	RUD3	Q12234	484 aa	Known RBP	5	□□□□□ -1.61
SUP35	YDR172W	YBL111C	Q3E7Y5	667 aa		5	□□□□□ -1.61
SUP35	YDR172W	ARG4	P04076	463 aa	Predicted RBP	4.99	□□□□□ -1.61
SUP35	YDR172W	FPS1	P23900	669 aa		4.99	□□□□□ -1.61
SUP35	YDR172W	VPS35	P34110	944 aa		4.99	□□□□□ -1.61
SUP35	YDR172W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
SUP35	YDR172W	MRX3	P38172	270 aa		4.99	□□□□□ -1.61
SUP35	YDR172W	MDJ2	P42834	146 aa		4.99	□□□□□ -1.61
SUP35	YDR172W	NMD5	P46970	1048 aa		4.99	□□□□□ -1.61
SUP35	YDR172W	RPS7B	P48164	190 aa	Known RBP	4.99	□□□□□ -1.61
SUP35	YDR172W	SCS3	P53012	380 aa		4.99	□□□□□ -1.61
SUP35	YDR172W	ENV11	P53246	860 aa		4.99	□□□□□ -1.61
SUP35	YDR172W	YDR222W	Q04925	415 aa		4.99	□□□□□ -1.61
SUP35	YDR172W	STE23	Q06010	1027 aa		4.99	□□□□□ -1.61
SUP35	YDR172W	OMS1	Q06668	471 aa		4.99	□□□□□ -1.61
SUP35	YDR172W	MSC6	Q08818	692 aa	Known RBP	4.99	□□□□□ -1.61
SUP35	YDR172W	PYC1	P11154	1178 aa	Known RBP	4.98	□□□□□ -1.61
SUP35	YDR172W	CDC42	P19073	191 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	CAP1	P28495	268 aa	Known RBP	4.98	□□□□□ -1.61
SUP35	YDR172W	GCD6	P32501	712 aa	Known RBP	4.98	□□□□□ -1.61
SUP35	YDR172W	RGT1	P32862	1170 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	SLD2	P34252	453 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	OLA1	P38219	394 aa	Known RBP	4.98	□□□□□ -1.61
SUP35	YDR172W	SPP381	P38282	291 aa	Predicted RBP	4.98	□□□□□ -1.61
SUP35	YDR172W	HIS2	P38635	335 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	EAF5	P39995	279 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	CPR7	P47103	393 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	SGM1	P47166	707 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	MDR1	P53258	950 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	YNL146W	P53906	100 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	YMR102C	Q03177	834 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	TY1A-DR2	Q03964	440 aa	Known RBP	4.98	□□□□□ -1.61
SUP35	YDR172W	TDA9	Q04545	1251 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	SNF1	P06782	633 aa	Known RBP	4.98	□□□□□ -1.61
SUP35	YDR172W	CLB1	P24868	471 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	GPI10	P30777	616 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	CSG2	P35206	410 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	GRS1	P38088	690 aa	Known RBP	4.98	□□□□□ -1.61
SUP35	YDR172W	GIP1	P38229	639 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	APM2	P38700	605 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	YEL025C	P39991	1188 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	ASG1	P40467	964 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	SAD1	P43589	448 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	TPO2	P53283	614 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	YMR187C	Q03236	431 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	PPM1	Q04081	328 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	IWR1	Q07532	353 aa	Predicted RBP	4.98	□□□□□ -1.61
SUP35	YDR172W	ACM1	Q08981	209 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	TRM11	Q12463	433 aa		4.98	□□□□□ -1.61
SUP35	YDR172W	VPS13	Q07878	3144 aa		4.97	□□□□□ -1.61
SUP35	YDR172W	RNR1	P21524	888 aa	Known RBP	4.97	□□□□□ -1.61
SUP35	YDR172W	YUR1	P26725	428 aa		4.97	□□□□□ -1.61
SUP35	YDR172W	GYP6	P32806	458 aa		4.97	□□□□□ -1.61
SUP35	YDR172W	ETP1	P38748	585 aa	Known RBP	4.97	□□□□□ -1.61
SUP35	YDR172W	CCT2	P39076	527 aa	Known RBP	4.97	□□□□□ -1.61
SUP35	YDR172W	PSY2	P40164	858 aa		4.97	□□□□□ -1.61
SUP35	YDR172W	YTA12	P40341	825 aa		4.97	□□□□□ -1.61
SUP35	YDR172W	RGD2	P43556	714 aa		4.97	□□□□□ -1.61
SUP35	YDR172W	DAS1	P47005	663 aa		4.97	□□□□□ -1.61
SUP35	YDR172W	ACF4	P47129	309 aa		4.97	□□□□□ -1.61
SUP35	YDR172W	ASN1	P49089	572 aa	Known RBP	4.97	□□□□□ -1.61
SUP35	YDR172W	PSP2	P50109	593 aa	Known RBP	4.97	□□□□□ -1.61
SUP35	YDR172W	RPA49	Q01080	415 aa	Predicted RBP	4.97	□□□□□ -1.61
SUP35	YDR172W	SDH5	Q08230	162 aa		4.97	□□□□□ -1.61
SUP35	YDR172W	MET7	Q08645	548 aa		4.97	□□□□□ -1.61
SUP35	YDR172W	OSW2	Q12202	724 aa		4.97	□□□□□ -1.61
SUP35	YDR172W	QCR6	P00127	147 aa		4.96	□□□□□ -1.61
SUP35	YDR172W	RPP1A	P05318	106 aa	Predicted RBP	4.96	□□□□□ -1.61
SUP35	YDR172W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.61	not detected
SUP35	YDR172W	RRT12	P25381	491 aa		4.96	□□□□□ -1.61
SUP35	YDR172W	SWI3	P32591	825 aa		4.96	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms