RNA–Protein interactions for RNA: YBL093C

ROX3, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene ROX3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROX3	YBL093C	OCT1	P35999	772 aa		5.9	□□□□□ -1.46
ROX3	YBL093C	SUL1	P38359	859 aa		5.9	□□□□□ -1.46
ROX3	YBL093C	ERG7	P38604	731 aa		5.9	□□□□□ -1.46
ROX3	YBL093C	SPF1	P39986	1215 aa	Known RBP	5.9	□□□□□ -1.46
ROX3	YBL093C	UBA2	P52488	636 aa		5.9	□□□□□ -1.46
ROX3	YBL093C	SDA1	P53313	767 aa	Known RBP	5.9	□□□□□ -1.46
ROX3	YBL093C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.9	□□□□□ -1.46	not detected
ROX3	YBL093C	AIM33	Q04516	312 aa		5.9	□□□□□ -1.46
ROX3	YBL093C	AFT2	Q08957	416 aa		5.9	□□□□□ -1.46
ROX3	YBL093C	BI4	P03879	638 aa		5.89	□□□□□ -1.47
ROX3	YBL093C	SES1	P07284	462 aa	Known RBP	5.89	□□□□□ -1.47
ROX3	YBL093C	YEL076C-A	P0CX16	216 aa		5.89	□□□□□ -1.47
ROX3	YBL093C	YLR464W	P0CX17	216 aa		5.89	□□□□□ -1.47
ROX3	YBL093C	KIN2	P13186	1147 aa	Known RBP	5.89	□□□□□ -1.47
ROX3	YBL093C	CKA2	P19454	339 aa		5.89	□□□□□ -1.47
ROX3	YBL093C	ISY1	P21374	235 aa	Predicted RBP	5.89	□□□□□ -1.47
ROX3	YBL093C	GAS1	P22146	559 aa	Known RBP	5.89	□□□□□ -1.47
ROX3	YBL093C	PWP2	P25635	923 aa	Known RBP	5.89	□□□□□ -1.47
ROX3	YBL093C	APL1	P27351	700 aa		5.89	□□□□□ -1.47
ROX3	YBL093C	CDC15	P27636	974 aa		5.89	□□□□□ -1.47
ROX3	YBL093C	PET10	P36139	283 aa		5.89	□□□□□ -1.47
ROX3	YBL093C	BCD1	P38772	366 aa		5.89	□□□□□ -1.47
ROX3	YBL093C	NOC2	P39744	710 aa	Known RBP	5.89	□□□□□ -1.47
ROX3	YBL093C	YEL076C	P39971	216 aa		5.89	□□□□□ -1.47
ROX3	YBL093C	YIL089W	P40500	205 aa		5.89	□□□□□ -1.47
ROX3	YBL093C	VTC2	P43585	828 aa		5.89	□□□□□ -1.47
ROX3	YBL093C	YGR237C	P50089	785 aa		5.89	□□□□□ -1.47
ROX3	YBL093C	SNO2	P53823	222 aa		5.89	□□□□□ -1.47
ROX3	YBL093C	MRPL22	P53881	309 aa		5.89	□□□□□ -1.47
ROX3	YBL093C	ORC4	P54791	529 aa		5.89	□□□□□ -1.47
ROX3	YBL093C	MFM1	Q02783	413 aa		5.89	□□□□□ -1.47
ROX3	YBL093C	BUL2	Q03758	920 aa	Known RBP	5.89	□□□□□ -1.47
ROX3	YBL093C	ADY4	Q05955	493 aa		5.89	□□□□□ -1.47
ROX3	YBL093C	UBX5	Q06682	500 aa		5.89	□□□□□ -1.47
ROX3	YBL093C	WHI4	Q07655	649 aa	Known RBP	5.89	□□□□□ -1.47
ROX3	YBL093C	PSR2	Q07949	397 aa		5.89	□□□□□ -1.47
ROX3	YBL093C	TMA16	Q08687	178 aa		5.89	□□□□□ -1.47
ROX3	YBL093C	ARP6	Q12509	438 aa		5.89	□□□□□ -1.47
ROX3	YBL093C	GSY1	P23337	708 aa		5.88	□□□□□ -1.47
ROX3	YBL093C	PER1	P25625	357 aa		5.88	□□□□□ -1.47
ROX3	YBL093C	PXL1	P36166	706 aa		5.88	□□□□□ -1.47
ROX3	YBL093C	ABZ1	P37254	787 aa	Predicted RBP	5.88	□□□□□ -1.47
ROX3	YBL093C	ADE17	P38009	592 aa	Known RBP	5.88	□□□□□ -1.47
ROX3	YBL093C	IRR1	P40541	1150 aa		5.88	□□□□□ -1.47
ROX3	YBL093C	TFG2	P41896	400 aa	Predicted RBP	5.88	□□□□□ -1.47
ROX3	YBL093C	RRT6	P53117	311 aa	Predicted RBP	5.88	□□□□□ -1.47
ROX3	YBL093C	FUS2	Q05670	677 aa		5.88	□□□□□ -1.47
ROX3	YBL093C	SPH1	Q06160	661 aa		5.88	□□□□□ -1.47
ROX3	YBL093C	GUD1	Q07729	489 aa		5.88	□□□□□ -1.47
ROX3	YBL093C	YDL177C	Q12257	170 aa		5.88	□□□□□ -1.47
ROX3	YBL093C	ILV1	P00927	576 aa	Known RBP	5.87	□□□□□ -1.47
ROX3	YBL093C	SAM1	P10659	382 aa	Known RBP	5.87	□□□□□ -1.47
ROX3	YBL093C	UBP11	P36026	717 aa		5.87	□□□□□ -1.47
ROX3	YBL093C	LIF1	P53150	421 aa		5.87	□□□□□ -1.47
ROX3	YBL093C	CBK1	P53894	756 aa		5.87	□□□□□ -1.47
ROX3	YBL093C	GFD1	Q04839	188 aa	Known RBP	5.87	□□□□□ -1.47
ROX3	YBL093C	SMC6	Q12749	1114 aa		5.87	□□□□□ -1.47
ROX3	YBL093C	CYC1	P00044	109 aa	Predicted RBP	5.86	□□□□□ -1.47
ROX3	YBL093C	RNQ1	P25367	405 aa		5.86	□□□□□ -1.47
ROX3	YBL093C	SAH1	P39954	449 aa	Known RBP	5.86	□□□□□ -1.47
ROX3	YBL093C	VAB2	P40003	282 aa		5.86	□□□□□ -1.47
ROX3	YBL093C	NUP82	P40368	713 aa		5.86	□□□□□ -1.47
ROX3	YBL093C	AIP1	P46680	615 aa	Known RBP	5.86	□□□□□ -1.47
ROX3	YBL093C	NET1	P47035	1189 aa		5.86	□□□□□ -1.47
ROX3	YBL093C	CTR1	P49573	406 aa		5.86	□□□□□ -1.47
ROX3	YBL093C	SRP1	Q02821	542 aa	Known RBP	5.86	□□□□□ -1.47
ROX3	YBL093C	HCR1	Q05775	265 aa	Known RBP	5.86	□□□□□ -1.47
ROX3	YBL093C	TOM1	Q03280	3268 aa		5.86	□□□□□ -1.47
ROX3	YBL093C	PHO13	P19881	312 aa		5.85	□□□□□ -1.47
ROX3	YBL093C	MRC1	P25588	1096 aa		5.85	□□□□□ -1.47
ROX3	YBL093C	PSO2	P30620	661 aa		5.85	□□□□□ -1.47
ROX3	YBL093C	UTR4	P32626	227 aa		5.85	□□□□□ -1.47
ROX3	YBL093C	SHP1	P34223	423 aa		5.85	□□□□□ -1.47
ROX3	YBL093C	YET1	P35723	206 aa		5.85	□□□□□ -1.47
ROX3	YBL093C	EBP2	P36049	427 aa	Known RBP	5.85	□□□□□ -1.47
ROX3	YBL093C	MCR1	P36060	302 aa	Known RBP	5.85	□□□□□ -1.47
ROX3	YBL093C	YBR184W	P38299	523 aa		5.85	□□□□□ -1.47
ROX3	YBL093C	SIP3	P38717	1229 aa		5.85	□□□□□ -1.47
ROX3	YBL093C	IRC24	P40580	263 aa		5.85	□□□□□ -1.47
ROX3	YBL093C	GPD2	P41911	440 aa	Known RBP	5.85	□□□□□ -1.47
ROX3	YBL093C	DIP5	P53388	608 aa		5.85	□□□□□ -1.47
ROX3	YBL093C	PGA2	P53903	129 aa		5.85	□□□□□ -1.47
ROX3	YBL093C	PTA1	Q01329	785 aa	Predicted RBP	5.85	□□□□□ -1.47
ROX3	YBL093C	NAN1	Q02931	896 aa	Known RBP	5.85	□□□□□ -1.47
ROX3	YBL093C	EBS1	Q03466	884 aa	Known RBP	5.85	□□□□□ -1.47
ROX3	YBL093C	PHM6	Q05637	104 aa		5.85	□□□□□ -1.47
ROX3	YBL093C	DUS3	Q06053	668 aa	Known RBP	5.85	□□□□□ -1.47
ROX3	YBL093C	YLH47	Q06493	454 aa		5.85	□□□□□ -1.47
ROX3	YBL093C	SPO75	Q07798	868 aa		5.85	□□□□□ -1.47
ROX3	YBL093C	YOL075C	Q08234	1294 aa		5.85	□□□□□ -1.47
ROX3	YBL093C	MOT1	P32333	1867 aa		5.85	□□□□□ -1.47
ROX3	YBL093C	CDC37	P06101	506 aa	Known RBP	5.84	□□□□□ -1.47
ROX3	YBL093C	CLN3	P13365	580 aa		5.84	□□□□□ -1.47
ROX3	YBL093C	CMP2	P14747	604 aa		5.84	□□□□□ -1.47
ROX3	YBL093C	PRP22	P24384	1145 aa	Known RBP	5.84	□□□□□ -1.47
ROX3	YBL093C	STE5	P32917	917 aa		5.84	□□□□□ -1.47
ROX3	YBL093C	YKL091C	P33324	310 aa	Known RBP	5.84	□□□□□ -1.47
ROX3	YBL093C	YKL151C	P36059	337 aa		5.84	□□□□□ -1.47
ROX3	YBL093C	PIH1	P38768	344 aa		5.84	□□□□□ -1.47
ROX3	YBL093C	ULP2	P40537	1034 aa	Predicted RBP	5.84	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms