RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 MAST2Q6P0Q8 1798 aa10.59□□□□□ -0.71
PHGDH-219ENST00000641513 MAST3O60307 1309 aa10.58□□□□□ -0.71
PHGDH-219ENST00000641513 CD2BP2O95400 341 aaKnown RBP10.58□□□□□ -0.72
PHGDH-219ENST00000641513 PDE6BP35913 854 aa10.58□□□□□ -0.72
PHGDH-219ENST00000641513 MAP3K12Q12852 859 aa10.58□□□□□ -0.72
PHGDH-219ENST00000641513 CRY2Q49AN0 593 aa10.58□□□□□ -0.72
PHGDH-219ENST00000641513 CREB3L3Q68CJ9 461 aa10.58□□□□□ -0.72
PHGDH-219ENST00000641513 NOL8Q76FK4 1167 aaKnown RBP10.58□□□□□ -0.72
PHGDH-219ENST00000641513 APPBP2Q92624 585 aa10.58□□□□□ -0.72
PHGDH-219ENST00000641513 MAP4K1Q92918 833 aa10.58□□□□□ -0.72
PHGDH-219ENST00000641513 JAKMIP1Q96N16 626 aaKnown RBP10.58□□□□□ -0.72
PHGDH-219ENST00000641513 BRIP1Q9BX63 1249 aa10.58□□□□□ -0.72
PHGDH-219ENST00000641513 UPF3BQ9BZI7 483 aaKnown RBP10.58□□□□□ -0.72
PHGDH-219ENST00000641513 FOXD4L1Q9NU39 408 aa10.58□□□□□ -0.72
PHGDH-219ENST00000641513 LRP2BPQ9P2M1 347 aa10.58□□□□□ -0.72
PHGDH-219ENST00000641513 NSFL1CQ9UNZ2 370 aaKnown RBP10.58□□□□□ -0.72
PHGDH-219ENST00000641513 U3KPZ7 1027 aaPredicted RBP10.58□□□□□ -0.72
PHGDH-219ENST00000641513 MYH2Q9UKX2 1941 aa10.58□□□□□ -0.72
PHGDH-219ENST00000641513 XDHP47989 1333 aa10.58□□□□□ -0.72
PHGDH-219ENST00000641513 PPEF1O14829 653 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-219ENST00000641513 SLC27A2O14975 620 aa10.57□□□□□ -0.72
PHGDH-219ENST00000641513 BBOX1O75936 387 aa10.57□□□□□ -0.72
PHGDH-219ENST00000641513 PDE6AP16499 860 aa10.57□□□□□ -0.72
PHGDH-219ENST00000641513 KLRK1P26718 216 aa10.57□□□□□ -0.72
PHGDH-219ENST00000641513 HIBADHP31937 336 aaKnown RBP10.57□□□□□ -0.72
PHGDH-219ENST00000641513 ADD2P35612 726 aa10.57□□□□□ -0.72
PHGDH-219ENST00000641513 GPSM2P81274 684 aa10.57□□□□□ -0.72
PHGDH-219ENST00000641513 CHAF1AQ13111 956 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-219ENST00000641513 RAB3GAP1Q15042 981 aa10.57□□□□□ -0.72
PHGDH-219ENST00000641513 RASEFQ8IZ41 740 aa10.57□□□□□ -0.72
PHGDH-219ENST00000641513 MAGEB6Q8N7X4 407 aa10.57□□□□□ -0.72
PHGDH-219ENST00000641513 ZNF622Q969S3 477 aaKnown RBP eCLIP10.57□□□□□ -0.723e-6■■■□□ 14.6
PHGDH-219ENST00000641513 FAM84BQ96KN1 310 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-219ENST00000641513 GBP4Q96PP9 640 aa10.57□□□□□ -0.72
PHGDH-219ENST00000641513 CRAMP1Q96RY5 1269 aa10.57□□□□□ -0.72
PHGDH-219ENST00000641513 ABCF2Q9UG63 623 aa10.57□□□□□ -0.72
PHGDH-219ENST00000641513 WWC3Q9ULE0 1092 aa10.57□□□□□ -0.72
PHGDH-219ENST00000641513 DENND2AQ9ULE3 1009 aa10.57□□□□□ -0.72
PHGDH-219ENST00000641513 LEMD3Q9Y2U8 911 aa10.57□□□□□ -0.72
PHGDH-219ENST00000641513 ZNF532Q9HCE3 1301 aa10.57□□□□□ -0.72
PHGDH-219ENST00000641513 BAZ2AQ9UIF9 1905 aaKnown RBP10.56□□□□□ -0.72
PHGDH-219ENST00000641513 SLX4Q8IY92 1834 aa10.56□□□□□ -0.72
PHGDH-219ENST00000641513 UFL1O94874 794 aa10.56□□□□□ -0.72
PHGDH-219ENST00000641513 NPR1P16066 1061 aa10.56□□□□□ -0.72
PHGDH-219ENST00000641513 CASTP20810 708 aaKnown RBP10.56□□□□□ -0.72
PHGDH-219ENST00000641513 ATP2B4P23634 1241 aa10.56□□□□□ -0.72
PHGDH-219ENST00000641513 HOXA10P31260 410 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-219ENST00000641513 NECTIN1Q15223 517 aa10.56□□□□□ -0.72
PHGDH-219ENST00000641513 SKOR2Q2VWA4 1001 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-219ENST00000641513 FBXO33Q7Z6M2 555 aa10.56□□□□□ -0.72
PHGDH-219ENST00000641513 SLC51AQ86UW1 340 aa10.56□□□□□ -0.72
PHGDH-219ENST00000641513 C2CD5Q86YS7 1000 aa10.56□□□□□ -0.72
PHGDH-219ENST00000641513 OSBP2Q969R2 916 aa10.56□□□□□ -0.72
PHGDH-219ENST00000641513 TMX4Q9H1E5 349 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-219ENST00000641513 RAI14Q9P0K7 980 aa10.56□□□□□ -0.72
PHGDH-219ENST00000641513 GGA1Q9UJY5 639 aa10.56□□□□□ -0.72
PHGDH-219ENST00000641513 CYP46A1Q9Y6A2 500 aa10.56□□□□□ -0.72
PHGDH-219ENST00000641513 KIAA1551Q9HCM1 1747 aa10.55□□□□□ -0.72
PHGDH-219ENST00000641513 DLEC1Q9Y238 1755 aa10.55□□□□□ -0.72
PHGDH-219ENST00000641513 FSD2A1L4K1 749 aa10.55□□□□□ -0.72
PHGDH-219ENST00000641513 C6orf229H3BNL8 230 aa10.55□□□□□ -0.72
PHGDH-219ENST00000641513 GPAA1O43292 621 aa10.55□□□□□ -0.72
PHGDH-219ENST00000641513 APPP05067 770 aa10.55□□□□□ -0.72
PHGDH-219ENST00000641513 HSPD1P10809 573 aaKnown RBP10.55□□□□□ -0.72
PHGDH-219ENST00000641513 CPA1P15085 419 aa10.55□□□□□ -0.72
PHGDH-219ENST00000641513 PSMA5P28066 241 aa10.55□□□□□ -0.72
PHGDH-219ENST00000641513 ALDH1B1P30837 517 aa10.55□□□□□ -0.72
PHGDH-219ENST00000641513 MCM2P49736 904 aa10.55□□□□□ -0.72
PHGDH-219ENST00000641513 UBE3CQ15386 1083 aa10.55□□□□□ -0.72
PHGDH-219ENST00000641513 VPS53Q5VIR6 699 aa10.55□□□□□ -0.72
PHGDH-219ENST00000641513 TMC4Q7Z404 712 aa10.55□□□□□ -0.72
PHGDH-219ENST00000641513 ZNF804AQ7Z570 1209 aa10.55□□□□□ -0.72
PHGDH-219ENST00000641513 AIDAQ96BJ3 306 aa10.55□□□□□ -0.72
PHGDH-219ENST00000641513 MASTLQ96GX5 879 aa10.55□□□□□ -0.72
PHGDH-219ENST00000641513 GPR101Q96P66 508 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-219ENST00000641513 DSCC1Q9BVC3 393 aa10.55□□□□□ -0.72
PHGDH-219ENST00000641513 PUS7LQ9H0K6 701 aaKnown RBP10.55□□□□□ -0.72
PHGDH-219ENST00000641513 CWC22Q9HCG8 908 aaKnown RBP10.55□□□□□ -0.72
PHGDH-219ENST00000641513 LTBP1Q14766 1721 aa10.55□□□□□ -0.72
PHGDH-219ENST00000641513 COL1A1P02452 1464 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-219ENST00000641513 KLRG2A4D1S0 409 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-219ENST00000641513 H0YIN7 160 aa10.54□□□□□ -0.72
PHGDH-219ENST00000641513 SEMA3EO15041 775 aa10.54□□□□□ -0.72
PHGDH-219ENST00000641513 SRGNP10124 158 aa10.54□□□□□ -0.72
PHGDH-219ENST00000641513 HOXD11P31277 338 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-219ENST00000641513 KRT32Q14532 448 aa10.54□□□□□ -0.72
PHGDH-219ENST00000641513 ADCK5Q3MIX3 580 aa10.54□□□□□ -0.72
PHGDH-219ENST00000641513 BLOC1S2Q6QNY1 142 aa10.54□□□□□ -0.72
PHGDH-219ENST00000641513 TXNRD3Q86VQ6 643 aa10.54□□□□□ -0.72
PHGDH-219ENST00000641513 CCDC125Q86Z20 511 aa10.54□□□□□ -0.72
PHGDH-219ENST00000641513 KCNB2Q92953 911 aa10.54□□□□□ -0.72
PHGDH-219ENST00000641513 PDRG1Q9NUG6 133 aa10.54□□□□□ -0.72
PHGDH-219ENST00000641513 CTNNA3Q9UI47 895 aa10.54□□□□□ -0.72
PHGDH-219ENST00000641513 JAG2Q9Y219 1238 aa10.54□□□□□ -0.72
PHGDH-219ENST00000641513 MBD4O95243 580 aa10.53□□□□□ -0.72
PHGDH-219ENST00000641513 CYP7A1P22680 504 aa10.53□□□□□ -0.72
PHGDH-219ENST00000641513 RUFY3Q7L099 469 aa10.53□□□□□ -0.72
PHGDH-219ENST00000641513 SP8Q8IXZ3 490 aa10.53□□□□□ -0.72
PHGDH-219ENST00000641513 TM6SF1Q9BZW5 370 aa10.53□□□□□ -0.72
PHGDH-219ENST00000641513 PDGFDQ9GZP0 370 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms