RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 PCDHAC2Q9Y5I4 1007 aa14.84□□□□□ -0.03
MECP2-226ENST00000640414 ECM29Q5VYK3 1845 aa14.84□□□□□ -0.03
MECP2-226ENST00000640414 ZNF804BA4D1E1 1349 aa14.84□□□□□ -0.03
MECP2-226ENST00000640414 CHL1O00533 1208 aa14.83□□□□□ -0.04
MECP2-226ENST00000640414 GTF2IP78347 998 aa14.83□□□□□ -0.04
MECP2-226ENST00000640414 RIC3Q7Z5B4 369 aa14.83□□□□□ -0.04
MECP2-226ENST00000640414 BRI3BPQ8WY22 251 aa14.83□□□□□ -0.04
MECP2-226ENST00000640414 OPTNQ96CV9 577 aa14.83□□□□□ -0.04
MECP2-226ENST00000640414 ARHGAP39Q9C0H5 1083 aa14.83□□□□□ -0.04
MECP2-226ENST00000640414 ELP3Q9H9T3 547 aa14.83□□□□□ -0.04
MECP2-226ENST00000640414 ZFYVE28Q9HCC9 887 aa14.83□□□□□ -0.04
MECP2-226ENST00000640414 HYPKQ9NX55 129 aa14.83□□□□□ -0.04
MECP2-226ENST00000640414 COL6A3P12111 3177 aa14.83□□□□□ -0.04
MECP2-226ENST00000640414 CUL9Q8IWT3 2517 aa14.82□□□□□ -0.04
MECP2-226ENST00000640414 CLRN2A0PK11 232 aa14.82□□□□□ -0.04
MECP2-226ENST00000640414 KLRK1P26718 216 aa14.82□□□□□ -0.04
MECP2-226ENST00000640414 MTFR1Q15390 333 aa14.82□□□□□ -0.04
MECP2-226ENST00000640414 MTMR14Q8NCE2 650 aa14.82□□□□□ -0.04
MECP2-226ENST00000640414 LRCH3Q96II8 777 aa14.82□□□□□ -0.04
MECP2-226ENST00000640414 YTHDC1Q96MU7 727 aaKnown RBP14.82□□□□□ -0.04
MECP2-226ENST00000640414 CDC5LQ99459 802 aaKnown RBP14.82□□□□□ -0.04
MECP2-226ENST00000640414 MYD88Q99836 296 aa14.82□□□□□ -0.04
MECP2-226ENST00000640414 BSDC1Q9NW68 430 aaPredicted RBP14.82□□□□□ -0.04
MECP2-226ENST00000640414 CCL15-CCL14A0A0B4J2E2 113 aa14.81□□□□□ -0.04
MECP2-226ENST00000640414 HOXB7P09629 217 aa14.81□□□□□ -0.04
MECP2-226ENST00000640414 CCL15Q16663 113 aa14.81□□□□□ -0.04
MECP2-226ENST00000640414 UBE2Q1Q7Z7E8 422 aa14.81□□□□□ -0.04
MECP2-226ENST00000640414 FAM43AQ8N2R8 423 aa14.81□□□□□ -0.04
MECP2-226ENST00000640414 CERS5Q8N5B7 392 aa14.81□□□□□ -0.04
MECP2-226ENST00000640414 CCDC191Q8NCU4 936 aa14.81□□□□□ -0.04
MECP2-226ENST00000640414 AOX1Q06278 1338 aa14.81□□□□□ -0.04
MECP2-226ENST00000640414 A0A1W2PPC1 479 aa14.8□□□□□ -0.04
MECP2-226ENST00000640414 LACTBP83111 547 aaPredicted RBP14.8□□□□□ -0.04
MECP2-226ENST00000640414 LMOD3Q0VAK6 560 aa14.8□□□□□ -0.04
MECP2-226ENST00000640414 CNKSR2Q8WXI2 1034 aa14.8□□□□□ -0.04
MECP2-226ENST00000640414 HTATIP2Q9BUP3 242 aa14.8□□□□□ -0.04
MECP2-226ENST00000640414 VEZTQ9HBM0 779 aa14.8□□□□□ -0.04
MECP2-226ENST00000640414 CWC25Q9NXE8 425 aaPredicted RBP14.8□□□□□ -0.04
MECP2-226ENST00000640414 ZBTB7BO15156 539 aaPredicted RBP14.79□□□□□ -0.04
MECP2-226ENST00000640414 TMPOP42166 694 aaKnown RBP14.79□□□□□ -0.04
MECP2-226ENST00000640414 CTSWP56202 376 aa14.79□□□□□ -0.04
MECP2-226ENST00000640414 GOLGA2Q08379 1002 aa14.79□□□□□ -0.04
MECP2-226ENST00000640414 RASA3Q14644 834 aa14.79□□□□□ -0.04
MECP2-226ENST00000640414 PRMT6Q96LA8 375 aaPredicted RBP14.79□□□□□ -0.04
MECP2-226ENST00000640414 GREM2Q9H772 168 aa14.79□□□□□ -0.04
MECP2-226ENST00000640414 PHAXQ9H814 394 aaKnown RBP14.79□□□□□ -0.04
MECP2-226ENST00000640414 LEMD3Q9Y2U8 911 aa14.79□□□□□ -0.04
MECP2-226ENST00000640414 LAS1LQ9Y4W2 734 aaKnown RBP14.79□□□□□ -0.04
MECP2-226ENST00000640414 NR2E3Q9Y5X4 410 aa14.79□□□□□ -0.04
MECP2-226ENST00000640414 SPDYE2BA6NHP3 402 aa14.78□□□□□ -0.04
MECP2-226ENST00000640414 MYO1BO43795 1136 aa14.78□□□□□ -0.04
MECP2-226ENST00000640414 GNRH1P01148 92 aa14.78□□□□□ -0.04
MECP2-226ENST00000640414 SPDYE6P0CI01 402 aa14.78□□□□□ -0.04
MECP2-226ENST00000640414 GTF2A2P52657 109 aa14.78□□□□□ -0.04
MECP2-226ENST00000640414 KIF22Q14807 665 aa14.78□□□□□ -0.04
MECP2-226ENST00000640414 CFAP100Q494V2 611 aa14.78□□□□□ -0.04
MECP2-226ENST00000640414 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.78□□□□□ -0.04
MECP2-226ENST00000640414 CCDC146Q8IYE0 955 aa14.78□□□□□ -0.04
MECP2-226ENST00000640414 TTLL11Q8NHH1 800 aa14.78□□□□□ -0.04
MECP2-226ENST00000640414 NKX2-3Q8TAU0 364 aa14.78□□□□□ -0.04
MECP2-226ENST00000640414 A0A0C4DFX4 3053 aa14.77□□□□□ -0.04
MECP2-226ENST00000640414 F8W031 263 aaPredicted RBP14.77□□□□□ -0.05
MECP2-226ENST00000640414 TLR2O60603 784 aa14.77□□□□□ -0.05
MECP2-226ENST00000640414 GJA8P48165 433 aa14.77□□□□□ -0.05
MECP2-226ENST00000640414 PRMT2P55345 433 aa14.77□□□□□ -0.05
MECP2-226ENST00000640414 DUSP27Q5VZP5 1158 aa14.77□□□□□ -0.05
MECP2-226ENST00000640414 CD209Q9NNX6 404 aa14.77□□□□□ -0.05
MECP2-226ENST00000640414 ECM2O94769 699 aaPredicted RBP14.76□□□□□ -0.05
MECP2-226ENST00000640414 MYH3P11055 1940 aa14.76□□□□□ -0.05
MECP2-226ENST00000640414 GJB1P08034 283 aa14.75□□□□□ -0.05
MECP2-226ENST00000640414 CCL5P13501 91 aa14.75□□□□□ -0.05
MECP2-226ENST00000640414 CTGFP29279 349 aa14.75□□□□□ -0.05
MECP2-226ENST00000640414 HNRNPUQ00839 825 aaKnown RBP eCLIP14.75□□□□□ -0.05
MECP2-226ENST00000640414 VGLL4Q14135 290 aa14.75□□□□□ -0.05
MECP2-226ENST00000640414 NEUROD2Q15784 382 aa14.75□□□□□ -0.05
MECP2-226ENST00000640414 CDAN1Q8IWY9 1227 aa14.75□□□□□ -0.05
MECP2-226ENST00000640414 RUNDC1Q96C34 613 aa14.75□□□□□ -0.05
MECP2-226ENST00000640414 METTL22Q9BUU2 404 aaPredicted RBP14.75□□□□□ -0.05
MECP2-226ENST00000640414 APAF1O14727 1248 aa14.74□□□□□ -0.05
MECP2-226ENST00000640414 WDHD1O75717 1129 aaPredicted RBP14.74□□□□□ -0.05
MECP2-226ENST00000640414 TEPSINQ96N21 525 aa14.74□□□□□ -0.05
MECP2-226ENST00000640414 COL25A1Q9BXS0 654 aaPredicted RBP14.74□□□□□ -0.05
MECP2-226ENST00000640414 ANKRD2Q9GZV1 360 aa14.74□□□□□ -0.05
MECP2-226ENST00000640414 STAP2Q9UGK3 403 aa14.74□□□□□ -0.05
MECP2-226ENST00000640414 SRRDQ9UH36 339 aa14.74□□□□□ -0.05
MECP2-226ENST00000640414 LAMA3Q16787 3333 aa14.73□□□□□ -0.05
MECP2-226ENST00000640414 IRS2Q9Y4H2 1338 aa14.73□□□□□ -0.05
MECP2-226ENST00000640414 BTBD19C9JJ37 291 aa14.73□□□□□ -0.05
MECP2-226ENST00000640414 FARP2O94887 1054 aaPredicted RBP14.73□□□□□ -0.05
MECP2-226ENST00000640414 GRK4P32298 578 aa14.73□□□□□ -0.05
MECP2-226ENST00000640414 IGHMBP2P38935 993 aaKnown RBP14.73□□□□□ -0.05
MECP2-226ENST00000640414 RBM5P52756 815 aaKnown RBP eCLIP14.73□□□□□ -0.05
MECP2-226ENST00000640414 MAP3K9P80192 1104 aa14.73□□□□□ -0.05
MECP2-226ENST00000640414 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.73□□□□□ -0.05
MECP2-226ENST00000640414 TRIM47Q96LD4 638 aa14.73□□□□□ -0.05
MECP2-226ENST00000640414 RNF208Q9H0X6 261 aa14.73□□□□□ -0.05
MECP2-226ENST00000640414 TRIM35Q9UPQ4 493 aa14.73□□□□□ -0.05
MECP2-226ENST00000640414 RIPOR2Q9Y4F9 1068 aa14.73□□□□□ -0.05
MECP2-226ENST00000640414 SPDYE5A6NIY4 337 aa14.72□□□□□ -0.05
MECP2-226ENST00000640414 OSBPP22059 807 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms