RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 NEK1Q96PY6 1258 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 NWD1Q149M9 1564 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 SGSM2O43147 1006 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 CAND2O75155 1236 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 GADD45BO75293 160 aaPredicted RBP6.5□□□□□ -1.37
SCARB2-218ENST00000639715 IFIT1P09914 478 aaKnown RBP6.5□□□□□ -1.37
SCARB2-218ENST00000639715 EVCP57679 992 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 FKBP4Q02790 459 aaKnown RBP eCLIP6.5□□□□□ -1.37
SCARB2-218ENST00000639715 ISM2Q6H9L7 571 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 SSH3Q8TE77 659 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 NACAP1Q9BZK3 213 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 PRDM11Q9NQV5 511 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 CNNM1Q9NRU3 951 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 LRRC7Q96NW7 1537 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 AK2P54819 239 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 LUZP1Q86V48 1076 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 TRIM22Q8IYM9 498 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 ARMC2Q8NEN0 867 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 CCDC47Q96A33 483 aaKnown RBP6.5□□□□□ -1.37
SCARB2-218ENST00000639715 SYTL4Q96C24 671 aaPredicted RBP6.5□□□□□ -1.37
SCARB2-218ENST00000639715 STAP2Q9UGK3 403 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 METP08581 1390 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 CBFA2T2O43439 604 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 ANXA1P04083 346 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 HSPA4P34932 840 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 ZNF165P49910 485 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 SLFNL1Q499Z3 407 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 WWC2Q6AWC2 1192 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 AMOTL1Q8IY63 956 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 SH3GL3Q99963 347 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 GOPCQ9HD26 462 aa6.5□□□□□ -1.37
SCARB2-218ENST00000639715 DDX21Q9NR30 783 aaKnown RBP eCLIP6.5□□□□□ -1.37
SCARB2-218ENST00000639715 GNL3LQ9NVN8 582 aaKnown RBP6.5□□□□□ -1.37
SCARB2-218ENST00000639715 BRD1O95696 1058 aa6.49□□□□□ -1.37
SCARB2-218ENST00000639715 SFPQP23246 707 aaKnown RBP eCLIP6.49□□□□□ -1.37
SCARB2-218ENST00000639715 VPS37DQ86XT2 251 aa6.49□□□□□ -1.37
SCARB2-218ENST00000639715 POTEDQ86YR6 584 aa6.49□□□□□ -1.37
SCARB2-218ENST00000639715 SIRT2Q8IXJ6 389 aa6.49□□□□□ -1.37
SCARB2-218ENST00000639715 WASF1Q92558 559 aa6.49□□□□□ -1.37
SCARB2-218ENST00000639715 PHAXQ9H814 394 aaKnown RBP6.49□□□□□ -1.37
SCARB2-218ENST00000639715 DACH1Q9UI36 760 aa6.49□□□□□ -1.37
SCARB2-218ENST00000639715 CNPY2Q9Y2B0 182 aa6.49□□□□□ -1.37
SCARB2-218ENST00000639715 PNMA6EA0A0J9YXQ4 647 aa6.49□□□□□ -1.37
SCARB2-218ENST00000639715 TM6SF1Q9BZW5 370 aa6.49□□□□□ -1.37
SCARB2-218ENST00000639715 PLEKHA4Q9H4M7 779 aa6.49□□□□□ -1.37
SCARB2-218ENST00000639715 NPHP3Q7Z494 1330 aa6.49□□□□□ -1.37
SCARB2-218ENST00000639715 CCDC69A6NI79 296 aa6.49□□□□□ -1.37
SCARB2-218ENST00000639715 RNMTO43148 476 aaKnown RBP6.49□□□□□ -1.37
SCARB2-218ENST00000639715 STARD3NLO95772 234 aa6.49□□□□□ -1.37
SCARB2-218ENST00000639715 SYT1P21579 422 aa6.49□□□□□ -1.37
SCARB2-218ENST00000639715 RUFY3Q7L099 469 aa6.49□□□□□ -1.37
SCARB2-218ENST00000639715 CARD6Q9BX69 1037 aa6.49□□□□□ -1.37
SCARB2-218ENST00000639715 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.49□□□□□ -1.37
SCARB2-218ENST00000639715 CAPN7Q9Y6W3 813 aa6.49□□□□□ -1.37
SCARB2-218ENST00000639715 TULP4Q9NRJ4 1543 aa6.49□□□□□ -1.37
SCARB2-218ENST00000639715 GOLGA6L10A6NI86 522 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 KCNA6P17658 529 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 UBE3BQ7Z3V4 1068 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 DDX54Q8TDD1 881 aaKnown RBP6.48□□□□□ -1.37
SCARB2-218ENST00000639715 SCLT1Q96NL6 688 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 RUFY1Q96T51 708 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 TEX13AQ9BXU3 409 aaPredicted RBP6.48□□□□□ -1.37
SCARB2-218ENST00000639715 USP44Q9H0E7 712 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 GBP3Q9H0R5 595 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 TMX4Q9H1E5 349 aaPredicted RBP6.48□□□□□ -1.37
SCARB2-218ENST00000639715 CWC25Q9NXE8 425 aaPredicted RBP6.48□□□□□ -1.37
SCARB2-218ENST00000639715 KIF4AO95239 1232 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 ELF1P32519 619 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 PIP4K2AP48426 406 aaPredicted RBP6.48□□□□□ -1.37
SCARB2-218ENST00000639715 MCMDC2Q4G0Z9 681 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 CREB3L3Q68CJ9 461 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 COPS6Q7L5N1 327 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 XAGE3Q8WTP9 111 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 RSRC1Q96IZ7 334 aaKnown RBP6.48□□□□□ -1.37
SCARB2-218ENST00000639715 C8orf76Q96K31 380 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 LARP6Q9BRS8 491 aaKnown RBP6.48□□□□□ -1.37
SCARB2-218ENST00000639715 TFIP11Q9UBB9 837 aaKnown RBP6.48□□□□□ -1.37
SCARB2-218ENST00000639715 NRBP1Q9UHY1 535 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 IGSF1Q8N6C5 1336 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 PLEKHG1Q9ULL1 1385 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 A2ML1A8K2U0 1454 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 GCP02774 474 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 ZFYP08048 801 aaPredicted RBP6.48□□□□□ -1.37
SCARB2-218ENST00000639715 ATP2B2Q01814 1243 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 NMIQ13287 307 aaPredicted RBP6.48□□□□□ -1.37
SCARB2-218ENST00000639715 CLEC17AQ6ZS10 378 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 RABEP2Q9H5N1 569 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.48□□□□□ -1.37
SCARB2-218ENST00000639715 SNX14Q9Y5W7 946 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 MRFAP1Q9Y605 127 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 ATP8B1O43520 1251 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 SSBP05455 408 aaKnown RBP eCLIP6.48□□□□□ -1.37
SCARB2-218ENST00000639715 PDE6BP35913 854 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 STX1AQ16623 288 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 ANO6Q4KMQ2 910 aa6.48□□□□□ -1.37
SCARB2-218ENST00000639715 STRCP1A6NGW2 1772 aa6.47□□□□□ -1.37
SCARB2-218ENST00000639715 USP6P35125 1406 aa6.47□□□□□ -1.37
SCARB2-218ENST00000639715 GOLGA6L7A0A1B0GV03 622 aa6.47□□□□□ -1.37
SCARB2-218ENST00000639715 SERPINC1P01008 464 aa6.47□□□□□ -1.37
SCARB2-218ENST00000639715 EIF4A1P60842 406 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms