RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 TLR2O60603 784 aa14.36□□□□□ -0.11
PTP4A1-207ENST00000639568 ECM2O94769 699 aaPredicted RBP14.36□□□□□ -0.11
PTP4A1-207ENST00000639568 GRK4P32298 578 aa14.36□□□□□ -0.11
PTP4A1-207ENST00000639568 UBXN2AP68543 259 aa14.36□□□□□ -0.11
PTP4A1-207ENST00000639568 NFE2L2Q16236 605 aa14.36□□□□□ -0.11
PTP4A1-207ENST00000639568 NBPF12Q5TAG4 269 aaPredicted RBP14.36□□□□□ -0.11
PTP4A1-207ENST00000639568 FAM43AQ8N2R8 423 aa14.36□□□□□ -0.11
PTP4A1-207ENST00000639568 ZBTB38Q8NAP3 1195 aaPredicted RBP14.36□□□□□ -0.11
PTP4A1-207ENST00000639568 TRIM47Q96LD4 638 aa14.36□□□□□ -0.11
PTP4A1-207ENST00000639568 CCDC85AQ96PX6 553 aaPredicted RBP14.36□□□□□ -0.11
PTP4A1-207ENST00000639568 VEZTQ9HBM0 779 aa14.36□□□□□ -0.11
PTP4A1-207ENST00000639568 PRDM6Q9NQX0 595 aa14.36□□□□□ -0.11
PTP4A1-207ENST00000639568 MTMR10Q9NXD2 777 aa14.36□□□□□ -0.11
PTP4A1-207ENST00000639568 HELBQ8NG08 1087 aaPredicted RBP14.35□□□□□ -0.11
PTP4A1-207ENST00000639568 RIPOR2Q9Y4F9 1068 aa14.35□□□□□ -0.11
PTP4A1-207ENST00000639568 COL4A1P02462 1669 aa14.35□□□□□ -0.11
PTP4A1-207ENST00000639568 ZNF804BA4D1E1 1349 aa14.35□□□□□ -0.11
PTP4A1-207ENST00000639568 CLRN2A0PK11 232 aa14.34□□□□□ -0.11
PTP4A1-207ENST00000639568 GTF2IP78347 998 aa14.34□□□□□ -0.11
PTP4A1-207ENST00000639568 TRIM28Q13263 835 aaKnown RBP14.34□□□□□ -0.11
PTP4A1-207ENST00000639568 MAPK8IP2Q13387 824 aaPredicted RBP14.34□□□□□ -0.11
PTP4A1-207ENST00000639568 U2AF1L4Q8WU68 220 aaKnown RBP14.34□□□□□ -0.11
PTP4A1-207ENST00000639568 CDC5LQ99459 802 aaKnown RBP14.34□□□□□ -0.11
PTP4A1-207ENST00000639568 CHPF2Q9P2E5 772 aa14.34□□□□□ -0.11
PTP4A1-207ENST00000639568 SRRDQ9UH36 339 aa14.34□□□□□ -0.11
PTP4A1-207ENST00000639568 SSC5DA1L4H1 1573 aa14.34□□□□□ -0.11
PTP4A1-207ENST00000639568 PDE8AO60658 829 aa14.33□□□□□ -0.12
PTP4A1-207ENST00000639568 FMNL1O95466 1100 aaPredicted RBP14.33□□□□□ -0.12
PTP4A1-207ENST00000639568 BMP8BP34820 402 aa14.33□□□□□ -0.12
PTP4A1-207ENST00000639568 PSMC4P43686 418 aa14.33□□□□□ -0.12
PTP4A1-207ENST00000639568 CCT4P50991 539 aaKnown RBP14.33□□□□□ -0.12
PTP4A1-207ENST00000639568 TFRCP02786 760 aaKnown RBP14.32□□□□□ -0.12
PTP4A1-207ENST00000639568 CETPP11597 493 aa14.32□□□□□ -0.12
PTP4A1-207ENST00000639568 RASA3Q14644 834 aa14.32□□□□□ -0.12
PTP4A1-207ENST00000639568 LRIT3Q3SXY7 679 aa14.32□□□□□ -0.12
PTP4A1-207ENST00000639568 MTMR14Q8NCE2 650 aa14.32□□□□□ -0.12
PTP4A1-207ENST00000639568 BABAM1Q9NWV8 329 aa14.32□□□□□ -0.12
PTP4A1-207ENST00000639568 MINPP1Q9UNW1 487 aa14.32□□□□□ -0.12
PTP4A1-207ENST00000639568 CSADQ9Y600 493 aa14.32□□□□□ -0.12
PTP4A1-207ENST00000639568 MAPK8IP3Q9UPT6 1336 aa14.32□□□□□ -0.12
PTP4A1-207ENST00000639568 VCANP13611 3396 aa14.32□□□□□ -0.12
PTP4A1-207ENST00000639568 SGPL1O95470 568 aa14.31□□□□□ -0.12
PTP4A1-207ENST00000639568 PPP2R1AP30153 589 aa14.31□□□□□ -0.12
PTP4A1-207ENST00000639568 RBM5P52756 815 aaKnown RBP eCLIP14.31□□□□□ -0.12
PTP4A1-207ENST00000639568 RIC3Q7Z5B4 369 aa14.31□□□□□ -0.12
PTP4A1-207ENST00000639568 GDF15Q99988 308 aa14.31□□□□□ -0.12
PTP4A1-207ENST00000639568 PNNQ9H307 717 aaKnown RBP14.31□□□□□ -0.12
PTP4A1-207ENST00000639568 ZCCHC17Q9NP64 241 aaKnown RBP14.31□□□□□ -0.12
PTP4A1-207ENST00000639568 BSDC1Q9NW68 430 aaPredicted RBP14.31□□□□□ -0.12
PTP4A1-207ENST00000639568 DBF4Q9UBU7 674 aaPredicted RBP14.31□□□□□ -0.12
PTP4A1-207ENST00000639568 SPDYE2BA6NHP3 402 aa14.3□□□□□ -0.12
PTP4A1-207ENST00000639568 F8W031 263 aaPredicted RBP14.3□□□□□ -0.12
PTP4A1-207ENST00000639568 SPDYE6P0CI01 402 aa14.3□□□□□ -0.12
PTP4A1-207ENST00000639568 CAPN2P17655 700 aa14.3□□□□□ -0.12
PTP4A1-207ENST00000639568 OSBPP22059 807 aa14.3□□□□□ -0.12
PTP4A1-207ENST00000639568 BCAMP50895 628 aa14.3□□□□□ -0.12
PTP4A1-207ENST00000639568 MAP3K9P80192 1104 aa14.3□□□□□ -0.12
PTP4A1-207ENST00000639568 TNFAIP1Q13829 316 aa14.3□□□□□ -0.12
PTP4A1-207ENST00000639568 VGLL4Q14135 290 aa14.3□□□□□ -0.12
PTP4A1-207ENST00000639568 CFAP100Q494V2 611 aa14.3□□□□□ -0.12
PTP4A1-207ENST00000639568 HDGFL1Q5TGJ6 251 aa14.3□□□□□ -0.12
PTP4A1-207ENST00000639568 LEMD3Q9Y2U8 911 aa14.3□□□□□ -0.12
PTP4A1-207ENST00000639568 MYPNQ86TC9 1320 aa14.3□□□□□ -0.12
PTP4A1-207ENST00000639568 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.29□□□□□ -0.12
PTP4A1-207ENST00000639568 TXNRD3Q86VQ6 643 aa14.29□□□□□ -0.12
PTP4A1-207ENST00000639568 TDHQ8IZJ6 230 aa14.29□□□□□ -0.12
PTP4A1-207ENST00000639568 PRMT6Q96LA8 375 aaPredicted RBP14.29□□□□□ -0.12
PTP4A1-207ENST00000639568 HYPKQ9NX55 129 aa14.29□□□□□ -0.12
PTP4A1-207ENST00000639568 RPTORQ8N122 1335 aa14.29□□□□□ -0.12
PTP4A1-207ENST00000639568 PSME4Q14997 1843 aa14.29□□□□□ -0.12
PTP4A1-207ENST00000639568 BTBD19C9JJ37 291 aa14.28□□□□□ -0.12
PTP4A1-207ENST00000639568 PCCAP05165 728 aaPredicted RBP14.28□□□□□ -0.12
PTP4A1-207ENST00000639568 KCNJ4P48050 445 aa14.28□□□□□ -0.12
PTP4A1-207ENST00000639568 GOLGA2Q08379 1002 aa14.28□□□□□ -0.12
PTP4A1-207ENST00000639568 SNAPC2Q13487 334 aa14.28□□□□□ -0.12
PTP4A1-207ENST00000639568 SLAIN1Q8ND83 568 aa14.28□□□□□ -0.12
PTP4A1-207ENST00000639568 PLEKHF1Q96S99 279 aa14.28□□□□□ -0.12
PTP4A1-207ENST00000639568 UNC93B1Q9H1C4 597 aa14.28□□□□□ -0.12
PTP4A1-207ENST00000639568 CPA4Q9UI42 421 aa14.28□□□□□ -0.12
PTP4A1-207ENST00000639568 PCDHAC2Q9Y5I4 1007 aa14.28□□□□□ -0.12
PTP4A1-207ENST00000639568 C17orf99Q6UX52 265 aa14.27□□□□□ -0.13
PTP4A1-207ENST00000639568 C7orf61Q8IZ16 206 aa14.27□□□□□ -0.13
PTP4A1-207ENST00000639568 CCDC191Q8NCU4 936 aa14.27□□□□□ -0.13
PTP4A1-207ENST00000639568 JARID2Q92833 1246 aaPredicted RBP14.27□□□□□ -0.13
PTP4A1-207ENST00000639568 ZMYND8Q9ULU4 1186 aaPredicted RBP14.27□□□□□ -0.13
PTP4A1-207ENST00000639568 COL9A1P20849 921 aa14.26□□□□□ -0.13
PTP4A1-207ENST00000639568 RIPK4P57078 832 aa14.26□□□□□ -0.13
PTP4A1-207ENST00000639568 NECAB2Q7Z6G3 386 aa14.26□□□□□ -0.13
PTP4A1-207ENST00000639568 PAWRQ96IZ0 340 aaKnown RBP14.26□□□□□ -0.13
PTP4A1-207ENST00000639568 DEFB118Q96PH6 123 aa14.26□□□□□ -0.13
PTP4A1-207ENST00000639568 MYD88Q99836 296 aa14.26□□□□□ -0.13
PTP4A1-207ENST00000639568 UBE2OQ9C0C9 1292 aaKnown RBP14.26□□□□□ -0.13
PTP4A1-207ENST00000639568 ANKRD2Q9GZV1 360 aa14.26□□□□□ -0.13
PTP4A1-207ENST00000639568 CWC25Q9NXE8 425 aaPredicted RBP14.26□□□□□ -0.13
PTP4A1-207ENST00000639568 ZNF646O15015 1829 aaPredicted RBP14.25□□□□□ -0.13
PTP4A1-207ENST00000639568 IRS2Q9Y4H2 1338 aa14.25□□□□□ -0.13
PTP4A1-207ENST00000639568 SPDYE5A6NIY4 337 aa14.25□□□□□ -0.13
PTP4A1-207ENST00000639568 CTGFP29279 349 aa14.25□□□□□ -0.13
PTP4A1-207ENST00000639568 IGHMBP2P38935 993 aaKnown RBP14.25□□□□□ -0.13
PTP4A1-207ENST00000639568 FCGRTP55899 365 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms