RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 REM2Q8IYK8 340 aaPredicted RBP21.33■■□□□ 1.01
SMN2-216ENST00000638794 KAZALD1Q96I82 304 aa21.33■■□□□ 1.01
SMN2-216ENST00000638794 SUCLG2Q96I99 432 aa21.33■■□□□ 1.01
SMN2-216ENST00000638794 NBPF7P0C2Y1 421 aaPredicted RBP21.32■■□□□ 1
SMN2-216ENST00000638794 DLGAP5Q15398 846 aa21.32■■□□□ 1
SMN2-216ENST00000638794 JAG2Q9Y219 1238 aa21.32■■□□□ 1
SMN2-216ENST00000638794 F8W031 263 aaPredicted RBP21.31■■□□□ 1
SMN2-216ENST00000638794 MTMR14Q8NCE2 650 aa21.31■■□□□ 1
SMN2-216ENST00000638794 PCDHAC2Q9Y5I4 1007 aa21.31■■□□□ 1
SMN2-216ENST00000638794 COL1A1P02452 1464 aaPredicted RBP21.31■■□□□ 1
SMN2-216ENST00000638794 FKBP1AP62942 108 aaKnown RBP21.3■■□□□ 1
SMN2-216ENST00000638794 PRKG1Q13976 671 aa21.3■■□□□ 1
SMN2-216ENST00000638794 MRPL50Q8N5N7 158 aaKnown RBP21.3■■□□□ 1
SMN2-216ENST00000638794 UTYO14607 1347 aa21.29■■□□□ 1
SMN2-216ENST00000638794 PTPN12Q05209 780 aaKnown RBP21.29■■□□□ 1
SMN2-216ENST00000638794 PUS3Q9BZE2 481 aaKnown RBP21.29■■□□□ 1
SMN2-216ENST00000638794 DEFB129Q9H1M3 183 aa21.29■■□□□ 1
SMN2-216ENST00000638794 ARAP2Q8WZ64 1704 aa21.29■■□□□ 1
SMN2-216ENST00000638794 MKRN3Q13064 507 aaKnown RBP21.28■■□□□ 1
SMN2-216ENST00000638794 UBE4AQ14139 1066 aa21.28■■□□□ 1
SMN2-216ENST00000638794 CFAP100Q494V2 611 aa21.28■■□□□ 1
SMN2-216ENST00000638794 ARMC9Q7Z3E5 817 aa21.28■■□□□ 1
SMN2-216ENST00000638794 FZD1Q9UP38 647 aa21.28■■□□□ 1
SMN2-216ENST00000638794 CLRN2A0PK11 232 aa21.27■■□□□ 1
SMN2-216ENST00000638794 SPDYE2BA6NHP3 402 aa21.27■■□□□ 1
SMN2-216ENST00000638794 SPDYE6P0CI01 402 aa21.27■■□□□ 1
SMN2-216ENST00000638794 GYG1P46976 350 aa21.27■■□□□ 1
SMN2-216ENST00000638794 BICC1Q9H694 974 aaKnown RBP21.27■■□□□ 1
SMN2-216ENST00000638794 ANGEL1Q9UNK9 670 aaKnown RBP21.27■■□□□ 1
SMN2-216ENST00000638794 SSC5DA1L4H1 1573 aa21.27■□□□□ 0.99
SMN2-216ENST00000638794 AOX1Q06278 1338 aa21.27■□□□□ 0.99
SMN2-216ENST00000638794 E9PSI1 815 aa21.26■□□□□ 0.99
SMN2-216ENST00000638794 MYO1BO43795 1136 aa21.26■□□□□ 0.99
SMN2-216ENST00000638794 RGS19P49795 217 aa21.26■□□□□ 0.99
SMN2-216ENST00000638794 RABL6Q3YEC7 729 aaPredicted RBP21.26■□□□□ 0.99
SMN2-216ENST00000638794 LDLRAD1Q5T700 205 aa21.26■□□□□ 0.99
SMN2-216ENST00000638794 TDRD7Q8NHU6 1098 aaKnown RBP21.26■□□□□ 0.99
SMN2-216ENST00000638794 PRMT6Q96LA8 375 aaPredicted RBP21.26■□□□□ 0.99
SMN2-216ENST00000638794 RIPOR2Q9Y4F9 1068 aa21.26■□□□□ 0.99
SMN2-216ENST00000638794 PTPRCP08575 1304 aa21.26■□□□□ 0.99
SMN2-216ENST00000638794 FAM205AQ6ZU69 1335 aa21.26■□□□□ 0.99
SMN2-216ENST00000638794 HIBADHP31937 336 aaKnown RBP21.25■□□□□ 0.99
SMN2-216ENST00000638794 TM4SF4P48230 202 aa21.25■□□□□ 0.99
SMN2-216ENST00000638794 ANKRD44Q8N8A2 993 aa21.25■□□□□ 0.99
SMN2-216ENST00000638794 SSH1Q8WYL5 1049 aa21.25■□□□□ 0.99
SMN2-216ENST00000638794 FAM84BQ96KN1 310 aaPredicted RBP21.25■□□□□ 0.99
SMN2-216ENST00000638794 PPP2R3BQ9Y5P8 575 aa21.25■□□□□ 0.99
SMN2-216ENST00000638794 RBM5P52756 815 aaKnown RBP eCLIP21.24■□□□□ 0.99
SMN2-216ENST00000638794 MLLT1Q03111 559 aaPredicted RBP21.24■□□□□ 0.99
SMN2-216ENST00000638794 MFSD14BQ5SR56 506 aa21.24■□□□□ 0.99
SMN2-216ENST00000638794 VEZTQ9HBM0 779 aa21.24■□□□□ 0.99
SMN2-216ENST00000638794 MROH5Q6ZUA9 1318 aa21.24■□□□□ 0.99
SMN2-216ENST00000638794 TBC1D8O95759 1140 aa21.23■□□□□ 0.99
SMN2-216ENST00000638794 CTU1Q7Z7A3 348 aaKnown RBP21.23■□□□□ 0.99
SMN2-216ENST00000638794 SLFN5Q08AF3 891 aa21.22■□□□□ 0.99
SMN2-216ENST00000638794 SREBF2Q12772 1141 aa21.22■□□□□ 0.99
SMN2-216ENST00000638794 MAP3K11Q16584 847 aa21.22■□□□□ 0.99
SMN2-216ENST00000638794 LRRC24Q50LG9 513 aa21.22■□□□□ 0.99
SMN2-216ENST00000638794 SPRYD7Q5W111 196 aa21.22■□□□□ 0.99
SMN2-216ENST00000638794 TTF2Q9UNY4 1162 aaKnown RBP21.22■□□□□ 0.99
SMN2-216ENST00000638794 LAMB1P07942 1786 aa21.21■□□□□ 0.99
SMN2-216ENST00000638794 PPP1R12BO60237 982 aaPredicted RBP21.21■□□□□ 0.99
SMN2-216ENST00000638794 ZNF296Q8WUU4 475 aaPredicted RBP21.21■□□□□ 0.99
SMN2-216ENST00000638794 SUPT20HL1Q3ZLR7 823 aa21.2■□□□□ 0.98
SMN2-216ENST00000638794 METTL24Q5JXM2 366 aa21.2■□□□□ 0.98
SMN2-216ENST00000638794 NBPF12Q5TAG4 269 aaPredicted RBP21.2■□□□□ 0.98
SMN2-216ENST00000638794 FBXO33Q7Z6M2 555 aa21.2■□□□□ 0.98
SMN2-216ENST00000638794 KLHDC4Q8TBB5 520 aa21.2■□□□□ 0.98
SMN2-216ENST00000638794 CLMNQ96JQ2 1002 aa21.2■□□□□ 0.98
SMN2-216ENST00000638794 USP44Q9H0E7 712 aa21.2■□□□□ 0.98
SMN2-216ENST00000638794 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.2■□□□□ 0.98
SMN2-216ENST00000638794 SERPINA10Q9UK55 444 aa21.2■□□□□ 0.98
SMN2-216ENST00000638794 OTOFQ9HC10 1997 aa21.19■□□□□ 0.98
SMN2-216ENST00000638794 TNRC18O15417 2968 aaPredicted RBP21.19■□□□□ 0.98
SMN2-216ENST00000638794 RASA3Q14644 834 aa21.19■□□□□ 0.98
SMN2-216ENST00000638794 SPDYE2Q495Y8 402 aa21.19■□□□□ 0.98
SMN2-216ENST00000638794 VPS37DQ86XT2 251 aa21.19■□□□□ 0.98
SMN2-216ENST00000638794 VGLL2Q8N8G2 317 aa21.19■□□□□ 0.98
SMN2-216ENST00000638794 SLC10A4Q96EP9 437 aa21.19■□□□□ 0.98
SMN2-216ENST00000638794 CDCA7LQ96GN5 454 aa21.19■□□□□ 0.98
SMN2-216ENST00000638794 IQSEC3Q9UPP2 1182 aaPredicted RBP21.19■□□□□ 0.98
SMN2-216ENST00000638794 GPR25O00155 361 aa21.18■□□□□ 0.98
SMN2-216ENST00000638794 PDE8BO95263 885 aa21.18■□□□□ 0.98
SMN2-216ENST00000638794 ZNF70Q9UC06 446 aaPredicted RBP21.18■□□□□ 0.98
SMN2-216ENST00000638794 CHAF1AQ13111 956 aaPredicted RBP21.17■□□□□ 0.98
SMN2-216ENST00000638794 TNFAIP1Q13829 316 aa21.17■□□□□ 0.98
SMN2-216ENST00000638794 GRIK5Q16478 980 aa21.17■□□□□ 0.98
SMN2-216ENST00000638794 ALDH1L2Q3SY69 923 aa21.17■□□□□ 0.98
SMN2-216ENST00000638794 NOM1Q5C9Z4 860 aaKnown RBP21.17■□□□□ 0.98
SMN2-216ENST00000638794 DZIP1LQ8IYY4 767 aaKnown RBP21.17■□□□□ 0.98
SMN2-216ENST00000638794 WNK4Q96J92 1243 aa21.17■□□□□ 0.98
SMN2-216ENST00000638794 CFHR5Q9BXR6 569 aa21.17■□□□□ 0.98
SMN2-216ENST00000638794 R3HDMLQ9H3Y0 253 aa21.17■□□□□ 0.98
SMN2-216ENST00000638794 TDRD3Q9H7E2 651 aaKnown RBP21.17■□□□□ 0.98
SMN2-216ENST00000638794 ZBTB48P10074 688 aaPredicted RBP21.16■□□□□ 0.98
SMN2-216ENST00000638794 CRKP46108 304 aa21.16■□□□□ 0.98
SMN2-216ENST00000638794 IREB2P48200 963 aaKnown RBP21.16■□□□□ 0.98
SMN2-216ENST00000638794 CAVIN4Q5BKX8 364 aa21.16■□□□□ 0.98
SMN2-216ENST00000638794 SMC4Q9NTJ3 1288 aa21.16■□□□□ 0.98
SMN2-216ENST00000638794 MYH13Q9UKX3 1938 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms