RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 ATF7IPQ6VMQ6 1270 aa22.82■■□□□ 1.24
CLN6-210ENST00000635747 VGLL2Q8N8G2 317 aa22.82■■□□□ 1.24
CLN6-210ENST00000635747 MTMR14Q8NCE2 650 aa22.82■■□□□ 1.24
CLN6-210ENST00000635747 KLHDC4Q8TBB5 520 aa22.82■■□□□ 1.24
CLN6-210ENST00000635747 CDCA5Q96FF9 252 aa22.82■■□□□ 1.24
CLN6-210ENST00000635747 A0A1B0GUL6 1792 aa22.81■■□□□ 1.24
CLN6-210ENST00000635747 GYG1P46976 350 aa22.81■■□□□ 1.24
CLN6-210ENST00000635747 RFX5P48382 616 aaPredicted RBP22.81■■□□□ 1.24
CLN6-210ENST00000635747 CTCFP49711 727 aaPredicted RBP22.81■■□□□ 1.24
CLN6-210ENST00000635747 DLGAP5Q15398 846 aa22.81■■□□□ 1.24
CLN6-210ENST00000635747 IFFO2Q5TF58 517 aa22.81■■□□□ 1.24
CLN6-210ENST00000635747 FBXO33Q7Z6M2 555 aa22.81■■□□□ 1.24
CLN6-210ENST00000635747 CERS5Q8N5B7 392 aa22.81■■□□□ 1.24
CLN6-210ENST00000635747 BEGAINQ9BUH8 593 aa22.81■■□□□ 1.24
CLN6-210ENST00000635747 POLR2AP24928 1970 aaKnown RBP22.81■■□□□ 1.24
CLN6-210ENST00000635747 BCAR3O75815 825 aa22.8■■□□□ 1.24
CLN6-210ENST00000635747 IFIT1P09914 478 aaKnown RBP22.8■■□□□ 1.24
CLN6-210ENST00000635747 FKBP1BP68106 108 aa22.8■■□□□ 1.24
CLN6-210ENST00000635747 PUM3Q15397 648 aaKnown RBP22.8■■□□□ 1.24
CLN6-210ENST00000635747 APOBEC3FQ8IUX4 373 aaKnown RBP22.8■■□□□ 1.24
CLN6-210ENST00000635747 FRAT1Q92837 279 aaPredicted RBP22.8■■□□□ 1.24
CLN6-210ENST00000635747 ZBED3Q96IU2 234 aaPredicted RBP22.8■■□□□ 1.24
CLN6-210ENST00000635747 LRRFIP2Q9Y608 721 aaKnown RBP22.8■■□□□ 1.24
CLN6-210ENST00000635747 FOXN1O15353 648 aa22.79■■□□□ 1.24
CLN6-210ENST00000635747 CIAO1O76071 339 aa22.79■■□□□ 1.24
CLN6-210ENST00000635747 TRIM27P14373 513 aa22.79■■□□□ 1.24
CLN6-210ENST00000635747 COL13A1Q5TAT6 717 aaPredicted RBP22.79■■□□□ 1.24
CLN6-210ENST00000635747 CCDC102AQ96A19 550 aa22.79■■□□□ 1.24
CLN6-210ENST00000635747 MEIS3Q99687 375 aa22.79■■□□□ 1.24
CLN6-210ENST00000635747 ZBED9Q6R2W3 1325 aa22.79■■□□□ 1.24
CLN6-210ENST00000635747 ZNF646O15015 1829 aaPredicted RBP22.78■■□□□ 1.24
CLN6-210ENST00000635747 MYO1BO43795 1136 aa22.78■■□□□ 1.24
CLN6-210ENST00000635747 FRAT2O75474 233 aaPredicted RBP22.78■■□□□ 1.24
CLN6-210ENST00000635747 NOGQ13253 232 aa22.78■■□□□ 1.24
CLN6-210ENST00000635747 RGMBQ6NW40 437 aa22.78■■□□□ 1.24
CLN6-210ENST00000635747 F8W031 263 aaPredicted RBP22.77■■□□□ 1.24
CLN6-210ENST00000635747 FGFR2P21802 821 aa22.77■■□□□ 1.24
CLN6-210ENST00000635747 NF2P35240 595 aa22.77■■□□□ 1.24
CLN6-210ENST00000635747 MFSD14BQ5SR56 506 aa22.77■■□□□ 1.24
CLN6-210ENST00000635747 TBC1D22AQ8WUA7 517 aa22.77■■□□□ 1.24
CLN6-210ENST00000635747 LPIN2Q92539 896 aa22.77■■□□□ 1.24
CLN6-210ENST00000635747 PRDM10Q9NQV6 1147 aa22.77■■□□□ 1.24
CLN6-210ENST00000635747 AOC2O75106 756 aa22.76■■□□□ 1.23
CLN6-210ENST00000635747 SLC5A1P13866 664 aa22.76■■□□□ 1.23
CLN6-210ENST00000635747 ZKSCAN2Q63HK3 967 aa22.76■■□□□ 1.23
CLN6-210ENST00000635747 ATG9AQ7Z3C6 839 aa22.76■■□□□ 1.23
CLN6-210ENST00000635747 CEP126Q9P2H0 1117 aa22.76■■□□□ 1.23
CLN6-210ENST00000635747 JAG2Q9Y219 1238 aa22.76■■□□□ 1.23
CLN6-210ENST00000635747 IL15P40933 162 aaPredicted RBP22.75■■□□□ 1.23
CLN6-210ENST00000635747 ZNF157P51786 506 aaPredicted RBP22.75■■□□□ 1.23
CLN6-210ENST00000635747 CFAP100Q494V2 611 aa22.75■■□□□ 1.23
CLN6-210ENST00000635747 COPRSQ9NQ92 184 aa22.75■■□□□ 1.23
CLN6-210ENST00000635747 SPDYE2BA6NHP3 402 aa22.74■■□□□ 1.23
CLN6-210ENST00000635747 CA12O43570 354 aa22.74■■□□□ 1.23
CLN6-210ENST00000635747 SPDYE6P0CI01 402 aa22.74■■□□□ 1.23
CLN6-210ENST00000635747 RBM5P52756 815 aaKnown RBP eCLIP22.74■■□□□ 1.23
CLN6-210ENST00000635747 SIL1Q9H173 461 aa22.74■■□□□ 1.23
CLN6-210ENST00000635747 SERPINA10Q9UK55 444 aa22.74■■□□□ 1.23
CLN6-210ENST00000635747 TTF2Q9UNY4 1162 aaKnown RBP22.74■■□□□ 1.23
CLN6-210ENST00000635747 THSD7BQ9C0I4 1608 aa22.73■■□□□ 1.23
CLN6-210ENST00000635747 GNAI2P04899 355 aa22.73■■□□□ 1.23
CLN6-210ENST00000635747 BCAMP50895 628 aa22.73■■□□□ 1.23
CLN6-210ENST00000635747 MTX1Q13505 466 aa22.73■■□□□ 1.23
CLN6-210ENST00000635747 CLUAP1Q96AJ1 413 aa22.73■■□□□ 1.23
CLN6-210ENST00000635747 SCAF8Q9UPN6 1271 aaKnown RBP22.73■■□□□ 1.23
CLN6-210ENST00000635747 PPP2R3BQ9Y5P8 575 aa22.73■■□□□ 1.23
CLN6-210ENST00000635747 SUGT1Q9Y2Z0 365 aa22.72■■□□□ 1.23
CLN6-210ENST00000635747 COL1A1P02452 1464 aaPredicted RBP22.72■■□□□ 1.23
CLN6-210ENST00000635747 SRGAP3O43295 1099 aa22.71■■□□□ 1.23
CLN6-210ENST00000635747 CHAF1AQ13111 956 aaPredicted RBP22.71■■□□□ 1.23
CLN6-210ENST00000635747 PRAMEF18Q5VWM3 479 aa22.71■■□□□ 1.23
CLN6-210ENST00000635747 TNS4Q8IZW8 715 aa22.71■■□□□ 1.23
CLN6-210ENST00000635747 PRMT6Q96LA8 375 aaPredicted RBP22.71■■□□□ 1.23
CLN6-210ENST00000635747 DEFB129Q9H1M3 183 aa22.71■■□□□ 1.23
CLN6-210ENST00000635747 IQSEC3Q9UPP2 1182 aaPredicted RBP22.71■■□□□ 1.23
CLN6-210ENST00000635747 FAM155AB1AL88 458 aaPredicted RBP22.7■■□□□ 1.22
CLN6-210ENST00000635747 HSPA8P11142 646 aaKnown RBP22.7■■□□□ 1.22
CLN6-210ENST00000635747 LBX1P52954 281 aa22.7■■□□□ 1.22
CLN6-210ENST00000635747 HDLBPQ00341 1268 aaKnown RBP22.7■■□□□ 1.22
CLN6-210ENST00000635747 TTLL12Q14166 644 aaPredicted RBP22.7■■□□□ 1.22
CLN6-210ENST00000635747 ATP2B3Q16720 1220 aa22.7■■□□□ 1.22
CLN6-210ENST00000635747 FTSJ3Q8IY81 847 aaKnown RBP22.7■■□□□ 1.22
CLN6-210ENST00000635747 REM2Q8IYK8 340 aaPredicted RBP22.7■■□□□ 1.22
CLN6-210ENST00000635747 GNL3LQ9NVN8 582 aaKnown RBP22.7■■□□□ 1.22
CLN6-210ENST00000635747 PAPPA2Q9BXP8 1791 aa22.69■■□□□ 1.22
CLN6-210ENST00000635747 SLC10A3P09131 477 aa22.69■■□□□ 1.22
CLN6-210ENST00000635747 ARMC9Q7Z3E5 817 aa22.69■■□□□ 1.22
CLN6-210ENST00000635747 MRIQ9BWK5 157 aa22.69■■□□□ 1.22
CLN6-210ENST00000635747 PA2G4Q9UQ80 394 aaKnown RBP22.69■■□□□ 1.22
CLN6-210ENST00000635747 MAST3O60307 1309 aa22.68■■□□□ 1.22
CLN6-210ENST00000635747 TNFAIP1Q13829 316 aa22.68■■□□□ 1.22
CLN6-210ENST00000635747 TMEM57Q8N5G2 664 aa22.68■■□□□ 1.22
CLN6-210ENST00000635747 WDR66Q8TBY9 1149 aa22.68■■□□□ 1.22
CLN6-210ENST00000635747 TNNQ9UQP3 1299 aa22.68■■□□□ 1.22
CLN6-210ENST00000635747 CLRN2A0PK11 232 aa22.67■■□□□ 1.22
CLN6-210ENST00000635747 CRKP46108 304 aa22.67■■□□□ 1.22
CLN6-210ENST00000635747 SUPT20HL1Q3ZLR7 823 aa22.67■■□□□ 1.22
CLN6-210ENST00000635747 DZIP1LQ8IYY4 767 aaKnown RBP22.67■■□□□ 1.22
CLN6-210ENST00000635747 VEZTQ9HBM0 779 aa22.67■■□□□ 1.22
CLN6-210ENST00000635747 AKAP2Q9Y2D5 859 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms