RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.18□□□□□ -0.62
LINC01108-202ENST00000635227 CCNJLQ8IV13 435 aa11.18□□□□□ -0.62
LINC01108-202ENST00000635227 ASAP3Q8TDY4 903 aa11.18□□□□□ -0.62
LINC01108-202ENST00000635227 CLASP1Q7Z460 1538 aa11.18□□□□□ -0.62
LINC01108-202ENST00000635227 FANCD2Q9BXW9 1451 aa11.18□□□□□ -0.62
LINC01108-202ENST00000635227 COL19A1Q14993 1142 aa11.17□□□□□ -0.62
LINC01108-202ENST00000635227 TXNDC11Q6PKC3 985 aa11.17□□□□□ -0.62
LINC01108-202ENST00000635227 CACTIN-AS1Q8N1I8 211 aa11.17□□□□□ -0.62
LINC01108-202ENST00000635227 NLRP2Q9NX02 1062 aa11.17□□□□□ -0.62
LINC01108-202ENST00000635227 PPME1Q9Y570 386 aa11.17□□□□□ -0.62
LINC01108-202ENST00000635227 SPDYE3A6NKU9 549 aa11.16□□□□□ -0.62
LINC01108-202ENST00000635227 GRIA4P48058 902 aa11.16□□□□□ -0.62
LINC01108-202ENST00000635227 RASSF7Q02833 373 aa11.16□□□□□ -0.62
LINC01108-202ENST00000635227 GRM2Q14416 872 aa11.16□□□□□ -0.62
LINC01108-202ENST00000635227 EAPPQ56P03 285 aaPredicted RBP11.16□□□□□ -0.62
LINC01108-202ENST00000635227 ALG1LQ6GMV1 187 aa11.16□□□□□ -0.62
LINC01108-202ENST00000635227 SOX13Q9UN79 622 aa11.16□□□□□ -0.62
LINC01108-202ENST00000635227 EIF4G3O43432 1585 aaKnown RBP11.16□□□□□ -0.62
LINC01108-202ENST00000635227 LINC01387J3KSC0 135 aa11.15□□□□□ -0.62
LINC01108-202ENST00000635227 DEAF1O75398 565 aaPredicted RBP11.15□□□□□ -0.62
LINC01108-202ENST00000635227 ATP2B2Q01814 1243 aa11.15□□□□□ -0.62
LINC01108-202ENST00000635227 TRIM28Q13263 835 aaKnown RBP11.15□□□□□ -0.62
LINC01108-202ENST00000635227 SPRED3Q2MJR0 410 aa11.15□□□□□ -0.62
LINC01108-202ENST00000635227 FBF1Q8TES7 1133 aa11.15□□□□□ -0.62
LINC01108-202ENST00000635227 BSNDQ8WZ55 320 aa11.15□□□□□ -0.62
LINC01108-202ENST00000635227 MUC3BQ9H195 1237 aa11.15□□□□□ -0.62
LINC01108-202ENST00000635227 GAPVD1Q14C86 1478 aa11.14□□□□□ -0.63
LINC01108-202ENST00000635227 ERCC3P19447 782 aa11.14□□□□□ -0.63
LINC01108-202ENST00000635227 FBXO33Q7Z6M2 555 aa11.14□□□□□ -0.63
LINC01108-202ENST00000635227 FMR1NBQ8N0W7 255 aaPredicted RBP11.14□□□□□ -0.63
LINC01108-202ENST00000635227 GLIS3Q8NEA6 775 aa11.14□□□□□ -0.63
LINC01108-202ENST00000635227 RNF19AQ9NV58 838 aa11.14□□□□□ -0.63
LINC01108-202ENST00000635227 CFTRP13569 1480 aa11.13□□□□□ -0.63
LINC01108-202ENST00000635227 IFT140Q96RY7 1462 aa11.13□□□□□ -0.63
LINC01108-202ENST00000635227 A0A096LPE4 126 aa11.13□□□□□ -0.63
LINC01108-202ENST00000635227 A0A1W2PPZ6 126 aa11.13□□□□□ -0.63
LINC01108-202ENST00000635227 RAC1P63000 192 aa11.13□□□□□ -0.63
LINC01108-202ENST00000635227 TAGLNQ01995 201 aaKnown RBP11.13□□□□□ -0.63
LINC01108-202ENST00000635227 SETDB1Q15047 1291 aa11.13□□□□□ -0.63
LINC01108-202ENST00000635227 PRRT3Q5FWE3 981 aa11.13□□□□□ -0.63
LINC01108-202ENST00000635227 VN1R5Q7Z5H4 357 aa11.13□□□□□ -0.63
LINC01108-202ENST00000635227 DCAF5Q96JK2 942 aa11.13□□□□□ -0.63
LINC01108-202ENST00000635227 BCO2Q9BYV7 579 aa11.13□□□□□ -0.63
LINC01108-202ENST00000635227 ABCB6Q9NP58 842 aa11.13□□□□□ -0.63
LINC01108-202ENST00000635227 SPATA31C1P0DKV0 1188 aa11.12□□□□□ -0.63
LINC01108-202ENST00000635227 GRIK4Q16099 956 aa11.12□□□□□ -0.63
LINC01108-202ENST00000635227 PRPF40BQ6NWY9 871 aaKnown RBP11.12□□□□□ -0.63
LINC01108-202ENST00000635227 NXPE4Q6UWF7 544 aa11.12□□□□□ -0.63
LINC01108-202ENST00000635227 DTWD1Q8N5C7 304 aa11.12□□□□□ -0.63
LINC01108-202ENST00000635227 PRDM2Q13029 1718 aa11.12□□□□□ -0.63
LINC01108-202ENST00000635227 KRBA1A5PL33 1030 aa11.11□□□□□ -0.63
LINC01108-202ENST00000635227 FAM177BA6PVY3 158 aa11.11□□□□□ -0.63
LINC01108-202ENST00000635227 PRPF40AO75400 957 aaKnown RBP11.11□□□□□ -0.63
LINC01108-202ENST00000635227 FBXO11Q86XK2 927 aa11.11□□□□□ -0.63
LINC01108-202ENST00000635227 CARD10Q9BWT7 1032 aa11.11□□□□□ -0.63
LINC01108-202ENST00000635227 OSBPL7Q9BZF2 842 aa11.11□□□□□ -0.63
LINC01108-202ENST00000635227 H3BRJ5 948 aa11.1□□□□□ -0.63
LINC01108-202ENST00000635227 CABP4P57796 275 aa11.1□□□□□ -0.63
LINC01108-202ENST00000635227 HGSNATQ68CP4 663 aa11.1□□□□□ -0.63
LINC01108-202ENST00000635227 GALNT11Q8NCW6 608 aa11.1□□□□□ -0.63
LINC01108-202ENST00000635227 DUSP9Q99956 384 aaKnown RBP11.1□□□□□ -0.63
LINC01108-202ENST00000635227 TRAK1Q9UPV9 953 aa11.1□□□□□ -0.63
LINC01108-202ENST00000635227 TMEM238LA0A1B0GVL6 79 aa11.09□□□□□ -0.63
LINC01108-202ENST00000635227 TM4SF5O14894 197 aa11.09□□□□□ -0.63
LINC01108-202ENST00000635227 FSCN2O14926 492 aa11.09□□□□□ -0.63
LINC01108-202ENST00000635227 GDF11O95390 407 aa11.09□□□□□ -0.63
LINC01108-202ENST00000635227 ELNP15502 786 aa11.09□□□□□ -0.63
LINC01108-202ENST00000635227 ALYREFQ86V81 257 aaKnown RBP11.09□□□□□ -0.63
LINC01108-202ENST00000635227 SOX1O00570 391 aaPredicted RBP11.08□□□□□ -0.64
LINC01108-202ENST00000635227 ITPKAP23677 461 aa11.08□□□□□ -0.64
LINC01108-202ENST00000635227 FCGRTP55899 365 aa11.08□□□□□ -0.64
LINC01108-202ENST00000635227 SHISA2Q6UWI4 295 aa11.08□□□□□ -0.64
LINC01108-202ENST00000635227 DLL1O00548 723 aa11.07□□□□□ -0.64
LINC01108-202ENST00000635227 IKBKEQ14164 716 aa11.07□□□□□ -0.64
LINC01108-202ENST00000635227 FAM117BQ6P1L5 589 aa11.07□□□□□ -0.64
LINC01108-202ENST00000635227 TMEM151AQ8N4L1 468 aa11.07□□□□□ -0.64
LINC01108-202ENST00000635227 SLC7A3Q8WY07 619 aa11.07□□□□□ -0.64
LINC01108-202ENST00000635227 ZNF576Q9H609 170 aa11.07□□□□□ -0.64
LINC01108-202ENST00000635227 SPG7Q9UQ90 795 aa11.07□□□□□ -0.64
LINC01108-202ENST00000635227 ESRRAP11474 423 aaPredicted RBP11.06□□□□□ -0.64
LINC01108-202ENST00000635227 SELPP16109 830 aa11.06□□□□□ -0.64
LINC01108-202ENST00000635227 MAP4K3Q8IVH8 894 aa11.06□□□□□ -0.64
LINC01108-202ENST00000635227 BCL2L13Q9BXK5 485 aa11.06□□□□□ -0.64
LINC01108-202ENST00000635227 CLEC4MQ9H2X3 399 aaPredicted RBP11.06□□□□□ -0.64
LINC01108-202ENST00000635227 SRA1Q9HD15 236 aaKnown RBP11.06□□□□□ -0.64
LINC01108-202ENST00000635227 EEA1Q15075 1411 aa11.06□□□□□ -0.64
LINC01108-202ENST00000635227 GNA15P30679 374 aa11.05□□□□□ -0.64
LINC01108-202ENST00000635227 PIP4K2BP78356 416 aa11.05□□□□□ -0.64
LINC01108-202ENST00000635227 PCDH1Q08174 1060 aa11.05□□□□□ -0.64
LINC01108-202ENST00000635227 ABCC8Q09428 1581 aa11.05□□□□□ -0.64
LINC01108-202ENST00000635227 ZNF423Q2M1K9 1284 aa11.05□□□□□ -0.64
LINC01108-202ENST00000635227 KLHDC7BQ96G42 594 aa11.05□□□□□ -0.64
LINC01108-202ENST00000635227 SEC31BQ9NQW1 1179 aa11.05□□□□□ -0.64
LINC01108-202ENST00000635227 PPP4R2Q9NY27 417 aa11.05□□□□□ -0.64
LINC01108-202ENST00000635227 PARP2Q9UGN5 583 aa11.05□□□□□ -0.64
LINC01108-202ENST00000635227 CHRNA4P43681 627 aa11.04□□□□□ -0.64
LINC01108-202ENST00000635227 FGD1P98174 961 aa11.04□□□□□ -0.64
LINC01108-202ENST00000635227 FOXD4L6Q3SYB3 417 aaPredicted RBP11.04□□□□□ -0.64
LINC01108-202ENST00000635227 FOXD4L3Q6VB84 417 aaPredicted RBP11.04□□□□□ -0.64
LINC01108-202ENST00000635227 DTHD1Q6ZMT9 781 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms