RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 CEP290O15078 2479 aa6.24□□□□□ -1.41
LINC00550-201ENST00000629293 MAPK8IP3Q9UPT6 1336 aa6.24□□□□□ -1.41
LINC00550-201ENST00000629293 NR6A1Q15406 480 aa6.24□□□□□ -1.41
LINC00550-201ENST00000629293 GPC2Q8N158 579 aa6.24□□□□□ -1.41
LINC00550-201ENST00000629293 STK32AQ8WU08 396 aa6.24□□□□□ -1.41
LINC00550-201ENST00000629293 GPR101Q96P66 508 aaPredicted RBP6.24□□□□□ -1.41
LINC00550-201ENST00000629293 BCL2L13Q9BXK5 485 aa6.24□□□□□ -1.41
LINC00550-201ENST00000629293 NYXQ9GZU5 481 aa6.24□□□□□ -1.41
LINC00550-201ENST00000629293 DDX21Q9NR30 783 aaKnown RBP eCLIP6.24□□□□□ -1.41
LINC00550-201ENST00000629293 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.24□□□□□ -1.41
LINC00550-201ENST00000629293 LAS1LQ9Y4W2 734 aaKnown RBP6.24□□□□□ -1.41
LINC00550-201ENST00000629293 TIAM2Q8IVF5 1701 aa6.23□□□□□ -1.41
LINC00550-201ENST00000629293 PASKQ96RG2 1323 aa6.23□□□□□ -1.41
LINC00550-201ENST00000629293 WDR33Q9C0J8 1336 aaKnown RBP6.23□□□□□ -1.41
LINC00550-201ENST00000629293 PPEF1O14829 653 aaPredicted RBP6.23□□□□□ -1.41
LINC00550-201ENST00000629293 RAD17O75943 681 aa6.23□□□□□ -1.41
LINC00550-201ENST00000629293 HCLS1P14317 486 aaPredicted RBP6.23□□□□□ -1.41
LINC00550-201ENST00000629293 CCDC27Q2M243 656 aa6.23□□□□□ -1.41
LINC00550-201ENST00000629293 SUSD4Q5VX71 490 aa6.23□□□□□ -1.41
LINC00550-201ENST00000629293 CAPNS2Q96L46 248 aa6.23□□□□□ -1.41
LINC00550-201ENST00000629293 WBP1LQ9NX94 342 aa6.23□□□□□ -1.41
LINC00550-201ENST00000629293 ANKRD31Q8N7Z5 1873 aa6.23□□□□□ -1.41
LINC00550-201ENST00000629293 PIK3CDO00329 1044 aa6.23□□□□□ -1.41
LINC00550-201ENST00000629293 PNISRQ8TF01 805 aaKnown RBP6.23□□□□□ -1.41
LINC00550-201ENST00000629293 TSPYL4Q9UJ04 414 aa6.23□□□□□ -1.41
LINC00550-201ENST00000629293 COL11A2P13942 1736 aaPredicted RBP6.23□□□□□ -1.41
LINC00550-201ENST00000629293 RBM47A0AV96 593 aaKnown RBP6.22□□□□□ -1.41
LINC00550-201ENST00000629293 FZD9O00144 591 aa6.22□□□□□ -1.41
LINC00550-201ENST00000629293 ATP9BO43861 1147 aa6.22□□□□□ -1.41
LINC00550-201ENST00000629293 AOC2O75106 756 aa6.22□□□□□ -1.41
LINC00550-201ENST00000629293 CELF2O95319 508 aaKnown RBP6.22□□□□□ -1.41
LINC00550-201ENST00000629293 MAP2K1Q02750 393 aaPredicted RBP6.22□□□□□ -1.41
LINC00550-201ENST00000629293 TMEM164Q5U3C3 297 aa6.22□□□□□ -1.41
LINC00550-201ENST00000629293 ABHD8Q96I13 439 aa6.22□□□□□ -1.41
LINC00550-201ENST00000629293 RBM17Q96I25 401 aaKnown RBP6.22□□□□□ -1.41
LINC00550-201ENST00000629293 NLRP3Q96P20 1036 aa6.22□□□□□ -1.41
LINC00550-201ENST00000629293 MAP3K15Q6ZN16 1313 aa6.22□□□□□ -1.41
LINC00550-201ENST00000629293 UBN2Q6ZU65 1347 aa6.22□□□□□ -1.41
LINC00550-201ENST00000629293 MYBBP1AQ9BQG0 1328 aaKnown RBP6.22□□□□□ -1.41
LINC00550-201ENST00000629293 RALBP1Q15311 655 aa6.22□□□□□ -1.41
LINC00550-201ENST00000629293 SYMPKQ92797 1274 aaKnown RBP6.22□□□□□ -1.41
LINC00550-201ENST00000629293 GLIS2Q9BZE0 524 aaPredicted RBP6.22□□□□□ -1.41
LINC00550-201ENST00000629293 KIAA1522Q9P206 1035 aaPredicted RBP6.22□□□□□ -1.41
LINC00550-201ENST00000629293 SCNN1DP51172 638 aa6.22□□□□□ -1.41
LINC00550-201ENST00000629293 DLK2Q6UY11 383 aa6.22□□□□□ -1.41
LINC00550-201ENST00000629293 PRDM10Q9NQV6 1147 aa6.22□□□□□ -1.41
LINC00550-201ENST00000629293 HSPA8P11142 646 aaKnown RBP6.21□□□□□ -1.41
LINC00550-201ENST00000629293 DPP8Q6V1X1 898 aaPredicted RBP6.21□□□□□ -1.41
LINC00550-201ENST00000629293 PPP1R42Q7Z4L9 355 aa6.21□□□□□ -1.41
LINC00550-201ENST00000629293 RDH13Q8NBN7 331 aa6.21□□□□□ -1.41
LINC00550-201ENST00000629293 COL3A1P02461 1466 aaPredicted RBP6.21□□□□□ -1.42
LINC00550-201ENST00000629293 FER1L6Q2WGJ9 1857 aa6.21□□□□□ -1.42
LINC00550-201ENST00000629293 E9PSI1 815 aa6.21□□□□□ -1.42
LINC00550-201ENST00000629293 GMPSP49915 693 aaPredicted RBP6.21□□□□□ -1.42
LINC00550-201ENST00000629293 EIF4A1P60842 406 aaKnown RBP6.21□□□□□ -1.42
LINC00550-201ENST00000629293 PROSER3Q2NL68 480 aa6.21□□□□□ -1.42
LINC00550-201ENST00000629293 PSMD1Q99460 953 aa6.21□□□□□ -1.42
LINC00550-201ENST00000629293 TRMT112Q9UI30 125 aaKnown RBP6.21□□□□□ -1.42
LINC00550-201ENST00000629293 NRXN2Q9P2S2 1712 aa6.21□□□□□ -1.42
LINC00550-201ENST00000629293 KLRG2A4D1S0 409 aaPredicted RBP6.21□□□□□ -1.42
LINC00550-201ENST00000629293 RASSF10A6NK89 507 aa6.21□□□□□ -1.42
LINC00550-201ENST00000629293 RIMBP2O15034 1052 aa6.21□□□□□ -1.42
LINC00550-201ENST00000629293 ECE1P42892 770 aa6.21□□□□□ -1.42
LINC00550-201ENST00000629293 CXCL9Q07325 125 aa6.21□□□□□ -1.42
LINC00550-201ENST00000629293 UTP14AQ9BVJ6 771 aaKnown RBP6.21□□□□□ -1.42
LINC00550-201ENST00000629293 VIRMAQ69YN4 1812 aaKnown RBP6.2□□□□□ -1.42
LINC00550-201ENST00000629293 SHTN1A0MZ66 631 aa6.2□□□□□ -1.42
LINC00550-201ENST00000629293 POTEB2H3BUK9 544 aa6.2□□□□□ -1.42
LINC00550-201ENST00000629293 SOX11P35716 441 aa6.2□□□□□ -1.42
LINC00550-201ENST00000629293 KRT24Q2M2I5 525 aa6.2□□□□□ -1.42
LINC00550-201ENST00000629293 CRY2Q49AN0 593 aa6.2□□□□□ -1.42
LINC00550-201ENST00000629293 CC2D2BQ6DHV5 1058 aa6.2□□□□□ -1.42
LINC00550-201ENST00000629293 POTEEQ6S8J3 1075 aa6.2□□□□□ -1.42
LINC00550-201ENST00000629293 MPNDQ8N594 471 aa6.2□□□□□ -1.42
LINC00550-201ENST00000629293 ZBED2Q9BTP6 218 aa6.2□□□□□ -1.42
LINC00550-201ENST00000629293 PPP4R2Q9NY27 417 aa6.2□□□□□ -1.42
LINC00550-201ENST00000629293 C6orf229H3BNL8 230 aa6.2□□□□□ -1.42
LINC00550-201ENST00000629293 RIPK4P57078 832 aa6.2□□□□□ -1.42
LINC00550-201ENST00000629293 IRX6P78412 446 aaPredicted RBP6.2□□□□□ -1.42
LINC00550-201ENST00000629293 NFE2L2Q16236 605 aa6.2□□□□□ -1.42
LINC00550-201ENST00000629293 CST9Q5W186 159 aa6.2□□□□□ -1.42
LINC00550-201ENST00000629293 DDX46Q7L014 1031 aaKnown RBP6.2□□□□□ -1.42
LINC00550-201ENST00000629293 COPS6Q7L5N1 327 aa6.2□□□□□ -1.42
LINC00550-201ENST00000629293 SLF2Q8IX21 1173 aa6.2□□□□□ -1.42
LINC00550-201ENST00000629293 CCDC146Q8IYE0 955 aa6.2□□□□□ -1.42
LINC00550-201ENST00000629293 OCSTAMPQ9BR26 566 aa6.2□□□□□ -1.42
LINC00550-201ENST00000629293 NSFL1CQ9UNZ2 370 aaKnown RBP6.2□□□□□ -1.42
LINC00550-201ENST00000629293 KIAA0100Q14667 2235 aaKnown RBP6.19□□□□□ -1.42
LINC00550-201ENST00000629293 ERVV-1B6SEH8 477 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 NTSR2O95665 410 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 PTPREP23469 700 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 FUT2Q10981 343 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 TBC1D10BQ4KMP7 808 aaPredicted RBP6.19□□□□□ -1.42
LINC00550-201ENST00000629293 PPP4R3BQ5MIZ7 849 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 CIAPIN1Q6FI81 312 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 XAGE3Q8WTP9 111 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 DCBLD2Q96PD2 775 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 DBNDD1Q9H9R9 158 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 GPRC5DQ9NZD1 345 aa6.19□□□□□ -1.42
LINC00550-201ENST00000629293 SCN7AQ01118 1682 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms