RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 C15orf52Q6ZUT6 534 aaKnown RBP24.07■■□□□ 1.44
SMN2-215ENST00000628696 DEFB129Q9H1M3 183 aa24.07■■□□□ 1.44
SMN2-215ENST00000628696 SPINK5Q9NQ38 1064 aaPredicted RBP24.07■■□□□ 1.44
SMN2-215ENST00000628696 FZD1Q9UP38 647 aa24.07■■□□□ 1.44
SMN2-215ENST00000628696 JAG2Q9Y219 1238 aa24.07■■□□□ 1.44
SMN2-215ENST00000628696 IRS2Q9Y4H2 1338 aa24.07■■□□□ 1.44
SMN2-215ENST00000628696 SREBF2Q12772 1141 aa24.06■■□□□ 1.44
SMN2-215ENST00000628696 LDHAL6AQ6ZMR3 332 aa24.06■■□□□ 1.44
SMN2-215ENST00000628696 CNNM1Q9NRU3 951 aa24.06■■□□□ 1.44
SMN2-215ENST00000628696 C9orf78Q9NZ63 289 aaPredicted RBP24.06■■□□□ 1.44
SMN2-215ENST00000628696 PCDHAC2Q9Y5I4 1007 aa24.06■■□□□ 1.44
SMN2-215ENST00000628696 GRM8O00222 908 aa24.05■■□□□ 1.44
SMN2-215ENST00000628696 IL1R1P14778 569 aa24.05■■□□□ 1.44
SMN2-215ENST00000628696 CFAP100Q494V2 611 aa24.05■■□□□ 1.44
SMN2-215ENST00000628696 SLC4A10Q6U841 1118 aa24.05■■□□□ 1.44
SMN2-215ENST00000628696 CLRN2A0PK11 232 aa24.04■■□□□ 1.44
SMN2-215ENST00000628696 MYO1BO43795 1136 aa24.04■■□□□ 1.44
SMN2-215ENST00000628696 LDLRAD1Q5T700 205 aa24.04■■□□□ 1.44
SMN2-215ENST00000628696 MTMR14Q8NCE2 650 aa24.04■■□□□ 1.44
SMN2-215ENST00000628696 ECM29Q5VYK3 1845 aa24.03■■□□□ 1.44
SMN2-215ENST00000628696 GPR25O00155 361 aa24.03■■□□□ 1.44
SMN2-215ENST00000628696 RBM5P52756 815 aaKnown RBP eCLIP24.03■■□□□ 1.44
SMN2-215ENST00000628696 SPRYD7Q5W111 196 aa24.03■■□□□ 1.44
SMN2-215ENST00000628696 SLC10A4Q96EP9 437 aa24.03■■□□□ 1.44
SMN2-215ENST00000628696 VEZTQ9HBM0 779 aa24.03■■□□□ 1.44
SMN2-215ENST00000628696 HPS5Q9UPZ3 1129 aa24.03■■□□□ 1.44
SMN2-215ENST00000628696 PKN2Q16513 984 aaKnown RBP24.02■■□□□ 1.44
SMN2-215ENST00000628696 FAM9BQ8IZU0 186 aa24.02■■□□□ 1.44
SMN2-215ENST00000628696 PRMT6Q96LA8 375 aaPredicted RBP24.02■■□□□ 1.44
SMN2-215ENST00000628696 PDE4DIPQ5VU43 2346 aa24.01■■□□□ 1.43
SMN2-215ENST00000628696 COL1A1P02452 1464 aaPredicted RBP24.01■■□□□ 1.43
SMN2-215ENST00000628696 PPP1R12BO60237 982 aaPredicted RBP24.01■■□□□ 1.43
SMN2-215ENST00000628696 FKBP1AP62942 108 aaKnown RBP24.01■■□□□ 1.43
SMN2-215ENST00000628696 SPDYE2BA6NHP3 402 aa24■■□□□ 1.43
SMN2-215ENST00000628696 ALDH1L1O75891 902 aa24■■□□□ 1.43
SMN2-215ENST00000628696 SPDYE6P0CI01 402 aa24■■□□□ 1.43
SMN2-215ENST00000628696 SRCIN1Q9C0H9 1055 aa24■■□□□ 1.43
SMN2-215ENST00000628696 R3HDMLQ9H3Y0 253 aa24■■□□□ 1.43
SMN2-215ENST00000628696 PPP2R3BQ9Y5P8 575 aa24■■□□□ 1.43
SMN2-215ENST00000628696 FKTNO75072 461 aa23.99■■□□□ 1.43
SMN2-215ENST00000628696 SUPT20HL1Q3ZLR7 823 aa23.99■■□□□ 1.43
SMN2-215ENST00000628696 CLMNQ96JQ2 1002 aa23.99■■□□□ 1.43
SMN2-215ENST00000628696 SLC34A2O95436 690 aa23.98■■□□□ 1.43
SMN2-215ENST00000628696 NOM1Q5C9Z4 860 aaKnown RBP23.98■■□□□ 1.43
SMN2-215ENST00000628696 AOX1Q06278 1338 aa23.98■■□□□ 1.43
SMN2-215ENST00000628696 MANSC4A6NHS7 340 aaPredicted RBP23.97■■□□□ 1.43
SMN2-215ENST00000628696 GYG1P46976 350 aa23.97■■□□□ 1.43
SMN2-215ENST00000628696 MAP3K11Q16584 847 aa23.97■■□□□ 1.43
SMN2-215ENST00000628696 NBPF12Q5TAG4 269 aaPredicted RBP23.97■■□□□ 1.43
SMN2-215ENST00000628696 SUCLG2Q96I99 432 aa23.97■■□□□ 1.43
SMN2-215ENST00000628696 WNK4Q96J92 1243 aa23.97■■□□□ 1.43
SMN2-215ENST00000628696 SSC5DA1L4H1 1573 aa23.96■■□□□ 1.43
SMN2-215ENST00000628696 ZNF316A6NFI3 1004 aaPredicted RBP23.96■■□□□ 1.43
SMN2-215ENST00000628696 ALDH1A1P00352 501 aa23.96■■□□□ 1.43
SMN2-215ENST00000628696 HIBADHP31937 336 aaKnown RBP23.96■■□□□ 1.43
SMN2-215ENST00000628696 UBE4AQ14139 1066 aa23.96■■□□□ 1.43
SMN2-215ENST00000628696 MFSD14BQ5SR56 506 aa23.96■■□□□ 1.43
SMN2-215ENST00000628696 PUS3Q9BZE2 481 aaKnown RBP23.96■■□□□ 1.43
SMN2-215ENST00000628696 TNRC18O15417 2968 aaPredicted RBP23.96■■□□□ 1.43
SMN2-215ENST00000628696 FAM205AQ6ZU69 1335 aa23.95■■□□□ 1.42
SMN2-215ENST00000628696 IREB2P48200 963 aaKnown RBP23.95■■□□□ 1.42
SMN2-215ENST00000628696 INHBEP58166 350 aa23.95■■□□□ 1.42
SMN2-215ENST00000628696 RASA3Q14644 834 aa23.95■■□□□ 1.42
SMN2-215ENST00000628696 FBXO46Q6PJ61 603 aaPredicted RBP23.95■■□□□ 1.42
SMN2-215ENST00000628696 IFNL1Q8IU54 200 aa23.95■■□□□ 1.42
SMN2-215ENST00000628696 TDRD7Q8NHU6 1098 aaKnown RBP23.95■■□□□ 1.42
SMN2-215ENST00000628696 CFHR5Q9BXR6 569 aa23.95■■□□□ 1.42
SMN2-215ENST00000628696 TTF2Q9UNY4 1162 aaKnown RBP23.95■■□□□ 1.42
SMN2-215ENST00000628696 ZBTB48P10074 688 aaPredicted RBP23.94■■□□□ 1.42
SMN2-215ENST00000628696 FAM84BQ96KN1 310 aaPredicted RBP23.94■■□□□ 1.42
SMN2-215ENST00000628696 USP2O75604 605 aaPredicted RBP23.93■■□□□ 1.42
SMN2-215ENST00000628696 NBPF7P0C2Y1 421 aaPredicted RBP23.93■■□□□ 1.42
SMN2-215ENST00000628696 KAZALD1Q96I82 304 aa23.93■■□□□ 1.42
SMN2-215ENST00000628696 VPS37DQ86XT2 251 aa23.92■■□□□ 1.42
SMN2-215ENST00000628696 TDRD3Q9H7E2 651 aaKnown RBP23.92■■□□□ 1.42
SMN2-215ENST00000628696 ZNF70Q9UC06 446 aaPredicted RBP23.92■■□□□ 1.42
SMN2-215ENST00000628696 UNCXA6NJT0 531 aa23.91■■□□□ 1.42
SMN2-215ENST00000628696 ZEB1P37275 1124 aaPredicted RBP23.91■■□□□ 1.42
SMN2-215ENST00000628696 TNFAIP1Q13829 316 aa23.91■■□□□ 1.42
SMN2-215ENST00000628696 SPDYE2Q495Y8 402 aa23.91■■□□□ 1.42
SMN2-215ENST00000628696 SERPINA10Q9UK55 444 aa23.91■■□□□ 1.42
SMN2-215ENST00000628696 IQSEC3Q9UPP2 1182 aaPredicted RBP23.91■■□□□ 1.42
SMN2-215ENST00000628696 RIPOR2Q9Y4F9 1068 aa23.91■■□□□ 1.42
SMN2-215ENST00000628696 MROH5Q6ZUA9 1318 aa23.9■■□□□ 1.42
SMN2-215ENST00000628696 IGF2BP3O00425 579 aaKnown RBP eCLIP23.9■■□□□ 1.42
SMN2-215ENST00000628696 ANKRD13AQ8IZ07 590 aa23.9■■□□□ 1.42
SMN2-215ENST00000628696 BICC1Q9H694 974 aaKnown RBP23.9■■□□□ 1.42
SMN2-215ENST00000628696 FRAT2O75474 233 aaPredicted RBP23.89■■□□□ 1.41
SMN2-215ENST00000628696 GJA5P36382 358 aa23.89■■□□□ 1.41
SMN2-215ENST00000628696 CHAF1AQ13111 956 aaPredicted RBP23.89■■□□□ 1.41
SMN2-215ENST00000628696 OTUD7BQ6GQQ9 843 aa23.89■■□□□ 1.41
SMN2-215ENST00000628696 DZIP1LQ8IYY4 767 aaKnown RBP23.89■■□□□ 1.41
SMN2-215ENST00000628696 TRIM17Q9Y577 477 aa23.89■■□□□ 1.41
SMN2-215ENST00000628696 TCP10L2B9ZVM9 353 aa23.88■■□□□ 1.41
SMN2-215ENST00000628696 CRKP46108 304 aa23.88■■□□□ 1.41
SMN2-215ENST00000628696 METTL24Q5JXM2 366 aa23.88■■□□□ 1.41
SMN2-215ENST00000628696 ELP3Q9H9T3 547 aa23.88■■□□□ 1.41
SMN2-215ENST00000628696 UTYO14607 1347 aa23.87■■□□□ 1.41
SMN2-215ENST00000628696 LRRC24Q50LG9 513 aa23.87■■□□□ 1.41
SMN2-215ENST00000628696 MRPL50Q8N5N7 158 aaKnown RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms